The Lung Microbiome: New Principles for Respiratory Bacteriology in Health and Disease

by Dickson, Robert P., Huffnagle, Gary B.
Published 2015

Cc Chemokine Receptor 2 Is Critical for Induction of Experimental Autoimmune Encephalomyelitis

by Fife, Brian T., Huffnagle, Gary B., Kuziel, William A., Karpus, William J.
Published 2000

Modulation of Post-Antibiotic Bacterial Community Reassembly and Host Response by Candida albicans

by Erb Downward, John R., Falkowski, Nicole R., Mason, Katie L., Muraglia, Ryan, Huffnagle, Gary B.
Published 2013

Draft Genome Sequences of Five Pseudomonas fluorescens Subclade I and II Strains, Isolated from Human Respiratory Samples

by Scales, Brittan S., Erb-Downward, John R., LiPuma, John J., Huffnagle, Gary B.
Published 2015

Comparative genomics of Pseudomonas fluorescens subclade III strains from human lungs

by Scales, Brittan S., Erb-Downward, John R., Huffnagle, Ian M., LiPuma, John J., Huffnagle, Gary B.
Published 2015

Draft Genome Sequences of Seven Pseudomonas fluorescens Subclade III Strains Isolated from Cystic Fibrosis Patients

by Scales, Brittan S., Erb-Downward, John R., Huffnagle, Ian M., LiPuma, John J., Huffnagle, Gary B.
Published 2015

Macrophage M1/M2 Polarization Dynamically Adapts to Changes in Cytokine Microenvironments in Cryptococcus neoformans Infection

by Davis, Michael J., Tsang, Tiffany M., Qiu, Yafeng, Dayrit, Jeremy K., Freij, Joudeh B., Huffnagle, Gary B., Olszewski, Michal A.
Published 2013

The effects of intestinal microbial community structure on disease manifestation in IL-10-/- mice infected with Helicobacter hepaticus

by Nagalingam, Nabeetha A, Robinson, Courtney J, Bergin, Ingrid L, Eaton, Kathryn A, Huffnagle, Gary B, Young, Vincent B
Published 2013

Application of a Neutral Community Model To Assess Structuring of the Human Lung Microbiome

by Venkataraman, Arvind, Bassis, Christine M., Beck, James M., Young, Vincent B., Curtis, Jeffrey L., Huffnagle, Gary B., Schmidt, Thomas M.
Published 2015

Use of Direct Gradient Analysis to Uncover Biological Hypotheses in 16S Survey Data and Beyond

by Erb-Downward, John R., Sadighi Akha, Amir A., Wang, Juan, Shen, Ning, He, Bei, Martinez, Fernando J., Gyetko, Margaret R., Curtis, Jeffrey L., Huffnagle, Gary B.
Published 2012

Antibiotic-induced shifts in the mouse gut microbiome and metabolome increase susceptibility to Clostridium difficile infection

by Theriot, Casey M., Koenigsknecht, Mark J., Carlson, Paul E., Hatton, Gabrielle E., Nelson, Adam M., Li, Bo, Huffnagle, Gary B., Li, Jun, Young, Vincent B.
Published 2014

The Systemic Inflammatory Response to Clostridium difficile Infection

by Rao, Krishna, Erb-Downward, John R., Walk, Seth T., Micic, Dejan, Falkowski, Nicole, Santhosh, Kavitha, Mogle, Jill A., Ring, Cathrin, Young, Vincent B., Huffnagle, Gary B., Aronoff, David M.
Published 2014

Analysis of the Upper Respiratory Tract Microbiotas as the Source of the Lung and Gastric Microbiotas in Healthy Individuals

by Bassis, Christine M., Erb-Downward, John R., Dickson, Robert P., Freeman, Christine M., Schmidt, Thomas M., Young, Vincent B., Beck, James M., Curtis, Jeffrey L., Huffnagle, Gary B.
Published 2015

Cell-associated bacteria in the human lung microbiome

by Dickson, Robert P, Erb-Downward, John R, Prescott, Hallie C, Martinez, Fernando J, Curtis, Jeffrey L, Lama, Vibha N, Huffnagle, Gary B
Published 2014

Procalcitonin Levels Associate with Severity of Clostridium difficile Infection

by Rao, Krishna, Walk, Seth T., Micic, Dejan, Chenoweth, Elizabeth, Deng, Lili, Galecki, Andrzej T., Jain, Ruchika, Trivedi, Itishree, Yu, Marie, Santhosh, Kavitha, Ring, Cathrin, Young, Vincent B., Huffnagle, Gary B., Aronoff, David M.
Published 2013

Changes in the Lung Microbiome following Lung Transplantation Include the Emergence of Two Distinct Pseudomonas Species with Distinct Clinical Associations

by Dickson, Robert P., Erb-Downward, John R., Freeman, Christine M., Walker, Natalie, Scales, Brittan S., Beck, James M., Martinez, Fernando J., Curtis, Jeffrey L., Lama, Vibha N., Huffnagle, Gary B.
Published 2014

A gene-targeted approach to investigate the intestinal butyrate-producing bacterial community

by Vital, Marius, Penton, Christopher R, Wang, Qiong, Young, Vincent B, Antonopoulos, Dion A, Sogin, Mitchell L, Morrison, Hilary G, Raffals, Laura, Chang, Eugene B, Huffnagle, Gary B, Schmidt, Thomas M, Cole, James R, Tiedje, James M
Published 2013

Human microbiome science: vision for the future, Bethesda, MD, July 24 to 26, 2013

by Ravel, Jacques, Blaser, Martin J, Braun, Jonathan, Brown, Eric, Bushman, Frederic D, Chang, Eugene B, Davies, Julian, Dewey, Kathryn G, Dinan, Timothy, Dominguez-Bello, Maria, Erdman, Susan E, Finlay, B Brett, Garrett, Wendy S, Huffnagle, Gary B, Huttenhower, Curtis, Jansson, Janet, Jeffery, Ian B, Jobin, Christian, Khoruts, Alexander, Kong, Heidi H, Lampe, Johanna W, Ley, Ruth E, Littman, Dan R, Mazmanian, Sarkis K, Mills, David A, Neish, Andrew S, Petrof, Elaine, Relman, David A, Rhodes, Rosamond, Turnbaugh, Peter J, Young, Vincent B, Knight, Rob, White, Owen
Published 2014