Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill

by Mason, Olivia U., Han, James, Woyke, Tanja, Jansson, Janet K.
Published 2014

ProDeGe: a computational protocol for fully automated decontamination of genomes

by Tennessen, Kristin, Andersen, Evan, Clingenpeel, Scott, Rinke, Christian, Lundberg, Derek S, Han, James, Dangl, Jeff L, Ivanova, Natalia, Woyke, Tanja, Kyrpides, Nikos, Pati, Amrita
Published 2016

High quality draft genome sequence of Corynebacterium ulceribovis type strain IMMIB-L1395T (DSM 45146T)

by Yassin, Atteyet F., Lapidus, Alla, Han, James, Reddy, T.B.K., Huntemann, Marcel, Pati, Amrita, Ivanova, Natalia, Markowitz, Victor, Woyke, Tanja, Klenk, Hans-Peter, Kyrpides, Nikos C.
Published 2015

Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, I...

by Susanti, Dwi, Johnson, Eric F., Lapidus, Alla, Han, James, Reddy, T. B. K., Pilay, Manoj, Ivanova, Natalia N., Markowitz, Victor M., Woyke, Tanja, Kyrpides, Nikos C., Mukhopadhyay, Biswarup
Published 2016

High quality draft genome sequence of Olivibacter sitiensis type strain (AW-6T), a diphenol degrader with genes involved in the catechol pathway

by Ntougias, Spyridon, Lapidus, Alla, Han, James, Mavromatis, Konstantinos, Pati, Amrita, Chen, Amy, Klenk, Hans-Peter, Woyke, Tanja, Fasseas, Constantinos, Kyrpides, Nikos C., Zervakis, Georgios I.
Published 2014

Genome sequence of Burkholderia mimosarum strain LMG 23256T, a Mimosa pigra microsymbiont from Anso, Taiwan

by Willems, Anne, Tian, Rui, Bräu, Lambert, Goodwin, Lynne, Han, James, Liolios, Konstantinos, Huntemann, Marcel, Pati, Amrita, Woyke, Tanja, Mavrommatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Reeve, Wayne
Published 2013

Genome sequence of the Wenxinia marina type strain (DSM 24838T), a representative of the Roseobacter group isolated from oilfield sediments

by Riedel, Thomas, Fiebig, Anne, Han, James, Huntemann, Marcel, Spring, Stefan, Petersen, Jörn, Ivanova, Natalia N., Markowitz, Victor, Woyke, Tanja, Göker, Markus, Kyrpides, Nikos C., Klenk, Hans-Peter
Published 2014

Complete genome sequence of Parvibaculum lavamentivorans type strain (DS-1T)

by Schleheck, David, Weiss, Michael, Pitluck, Sam, Bruce, David, Land, Miriam L., Han, Shunsheng, Saunders, Elizabeth, Tapia, Roxanne, Detter, Chris, Brettin, Thomas, Han, James, Woyke, Tanja, Goodwin, Lynne, Pennacchio, Len, Nolan, Matt, Cook, Alasdair M., Kjelleberg, Staffan, Thomas, Torsten
Published 2011

Genome sequence of Ensifer sp. TW10; a Tephrosia wallichii (Biyani) microsymbiont native to the Indian Thar Desert

by Tak, Nisha, Gehlot, Hukam S, Kaushik, Muskan, Choudhary, Sunil, Tiwari, Ravi, Tian, Rui, Hill, Yvette, Bräu, Lambert, Goodwin, Lynne, Han, James, Liolios, Konstantinos, Huntemann, Marcel, Palaniappan, Krishna, Pati, Amrita, Mavromatis, Konstantinos, Ivanova, Natalia, Markowitz, Victor, Woyke, Tanja, Kyrpides, Nikos, Reeve, Wayne
Published 2013

Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17

by Terpolilli, Jason, Hill, Yvette, Tian, Rui, Howieson, John, Bräu, Lambert, Goodwin, Lynne, Han, James, Liolios, Konstantinos, Huntemann, Marcel, Pati, Amrita, Woyke, Tanja, Mavromatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Reeve, Wayne
Published 2013

Genome sequence of Ensifer medicae strain WSM1369; an effective microsymbiont of the annual legume Medicago sphaerocarpos

by Terpolilli, Jason, Garau, Giovanni, Hill, Yvette, Tian, Rui, Howieson, John, Bräu, Lambert, Goodwin, Lynne, Han, James, Liolios, Konstantinos, Huntemann, Marcel, Pati, Amrita, Woyke, Tanja, Mavromatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Reeve, Wayne
Published 2013

High quality draft genome sequence of Brachymonas chironomi AIMA4T (DSM 19884T) isolated from a Chironomus sp. egg mass

by Laviad, Sivan, Lapidus, Alla, Han, James, Haynes, Matthew, Reddy, TBK, Huntemann, Marcel, Pati, Amrita, Ivanova, Natalia N, Mavromatis, Konstantinos, Lang, Elke, Rohde, Manfred, Markowitz, Victor, Woyke, Tanja, Klenk, Hans-Peter, Kyrpides, Nikos C, Halpern, Malka
Published 2015

High quality draft genome sequence of Meganema perideroedes str. Gr1T and a proposal for its reclassification to the family Meganemaceae fam. nov.

by McIlroy, Simon J, Lapidus, Alla, Thomsen, Trine R, Han, James, Haynes, Matthew, Lobos, Elizabeth, Huntemann, Marcel, Pati, Amrita, Ivanova, Natalia N, Markowitz, Victor, Verbarg, Susanne, Woyke, Tanja, Klenk, Hans-Peter, Kyrpides, Nikos, Nielsen, Per H
Published 2015

High quality draft genome sequence of Bacteroides barnesiae type strain BL2T (DSM 18169T) from chicken caecum

by Sakamoto, Mitsuo, Lapidus, Alla L., Han, James, Trong, Stephan, Haynes, Matthew, Reddy, T. B. K., Mikhailova, Natalia, Huntemann, Marcel, Pati, Amrita, Ivanova, Natalia N., Pukall, Rüdiger, Markowitz, Victor M., Woyke, Tanja, Klenk, Hans-Peter, Kyrpides, Nikos C., Ohkuma, Moriya
Published 2015

Genome sequence of the pink–pigmented marine bacterium Loktanella hongkongensis type strain (UST950701–009PT), a representative of the Roseobacter group

by Lau, Stanley CK, Riedel, Thomas, Fiebig, Anne, Han, James, Huntemann, Marcel, Petersen, Jörn, Ivanova, Natalia N., Markowitz, Victor, Woyke, Tanja, Göker, Markus, Kyrpides, Nikos C., Klenk, Hans-Peter, Qian, Pei-Yuan
Published 2015

High-quality draft genome sequence of Gracilimonas tropica CL-CB462T (DSM 19535T), isolated from a Synechococcus culture

by Choi, Dong Han, Ahn, Chisang, Jang, Gwang Il, Lapidus, Alla, Han, James, Reddy, T. B. K., Huntemann, Marcel, Pati, Amrita, Ivanova, Natalia, Markowitz, Victor, Rohde, Manfred, Tindall, Brian, Göker, Markus, Woyke, Tanja, Klenk, Hans-Peter, Kyrpides, Nikos C, Cho, Byung Cheol
Published 2015

Genome sequence of Microvirga lupini strain LUT6T, a novel Lupinus alphaproteobacterial microsymbiont from Texas

by Reeve, Wayne, Parker, Matthew, Tian, Rui, Goodwin, Lynne, Teshima, Hazuki, Tapia, Roxanne, Han, Cliff, Han, James, Liolios, Konstantinos, Huntemann, Marcel, Pati, Amrita, Woyke, Tanja, Mavromatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos
Published 2014

Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia

by Walker, Robert, Watkin, Elizabeth, Tian, Rui, Bräu, Lambert, O’Hara, Graham, Goodwin, Lynne, Han, James, Reddy, Tatiparthi, Huntemann, Marcel, Pati, Amrita, Woyke, Tanja, Mavromatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Reeve, Wayne
Published 2013

Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2230 from Karijini National Park, Australia

by Walker, Robert, Watkin, Elizabeth, Tian, Rui, Bräu, Lambert, O’Hara, Graham, Goodwin, Lynne, Han, James, Lobos, Elizabeth, Huntemann, Marcel, Pati, Amrita, Woyke, Tanja, Mavromatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Reeve, Wayne
Published 2013

Genome sequence of the Medicago-nodulating Ensifer meliloti commercial inoculant strain RRI128

by Reeve, Wayne, Ballard, Ross, Drew, Elizabeth, Tian, Rui, Bräu, Lambert, Goodwin, Lynne, Huntemann, Marcel, Han, James, Tatiparthi, Reddy, Chen, Amy, Mavrommatis, Konstantinos, Markowitz, Victor, Palaniappan, Krishna, Ivanova, Natalia, Pati, Amrita, Woyke, Tanja, Kyrpides, Nikos
Published 2014