Variability in pathogenicity prediction programs: impact on clinical diagnostics

by Walters-Sen, Lauren C, Hashimoto, Sayaka, Thrush, Devon Lamb, Reshmi, Shalini, Gastier-Foster, Julie M, Astbury, Caroline, Pyatt, Robert E
Published 2015

Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays

by Auer, Herbert, Newsom, David L, Nowak, Norma J, McHugh, Kirk M, Singh, Sunita, Yu, Chack-Yung, Yang, Yan, Wenger, Gail D, Gastier-Foster, Julie M, Kornacker, Karl
Published 2007

MLLT1 YEATS domain mutations in clinically distinctive Favourable Histology Wilms tumours

by Perlman, Elizabeth J., Gadd, Samantha, Arold, Stefan T., Radhakrishnan, Anand, Gerhard, Daniela S., Jennings, Lawrence, Huff, Vicki, Guidry Auvil, Jaime M., Davidsen, Tanja M., Dome, Jeffrey S., Meerzaman, Daoud, Hsu, Chih Hao, Nguyen, Cu, Anderson, James, Ma, Yussanne, Mungall, Andrew J., Moore, Richard A., Marra, Marco A., Mullighan, Charles G., Ma, Jing, Wheeler, David A., Hampton, Oliver A., Gastier-Foster, Julie M., Ross, Nicole, Smith, Malcolm A.
Published 2015

TCF21 hypermethylation in genetically quiescent clear cell sarcoma of the kidney

by Gooskens, Saskia L., Gadd, Samantha, Guidry Auvil, Jaime M., Gerhard, Daniela S., Khan, Javed, Patidar, Rajesh, Meerzaman, Daoud, Chen, Qing-Rong, Hsu, Chih Hao, Yan, Chunhua, Nguyen, Cu, Hu, Ying, Mullighan, Charles G., Ma, Jing, Jennings, Lawrence J., de Krijger, Ronald R., van den Heuvel-Eibrink, Marry M., Smith, Malcolm A., Ross, Nicole, Gastier-Foster, Julie M., Perlman, Elizabeth J.
Published 2015

Inherited coding variants at the CDKN2A locus influence susceptibility to acute lymphoblastic leukaemia in children

by Xu, Heng, Zhang, Hui, Yang, Wenjian, Yadav, Rachita, Morrison, Alanna C., Qian, Maoxiang, Devidas, Meenakshi, Liu, Yu, Perez-Andreu, Virginia, Zhao, Xujie, Gastier-Foster, Julie M., Lupo, Philip J., Neale, Geoff, Raetz, Elizabeth, Larsen, Eric, Bowman, W. Paul, Carroll, William L., Winick, Naomi, Williams, Richard, Hansen, Torben, Holm, Jens-Christian, Mardis, Elaine, Fulton, Robert, Pui, Ching-Hon, Zhang, Jinghui, Mullighan, Charles G., Evans, William E., Hunger, Stephen P., Gupta, Ramneek, Schmiegelow, Kjeld, Loh, Mignon L., Relling, Mary V., Yang, Jun J.
Published 2015

Germline Genetic Variation in ETV6 and Risk of Childhood Acute Lymphoblastic Leukemia: a Systematic Genetic Study

by Moriyama, Takaya, Metzger, Monika L., Wu, Gang, Nishii, Rina, Qian, Maoxiang, Devidas, Meenakshi, Yang, Wenjian, Cheng, Cheng, Cao, Emily, Quinn, Raimondi, Susana, Gastier-Foster, Julie M., Raetz, Elizabeth, Larsen, Eric, Martin, Paul L., Bowman, W. Paul, Winick, Naomi, Komada, Yoshihiro, Wang, Shuoguo, Edmonson, Michael, Xu, Heng, Mardis, Elaine, Fulton, Robert, Pui, Mullighan, Charles, Evans, William E., Zhang, Jinghui, Hunger, Stephen P., Relling, Mary V., Nichols, Kim E., Loh, Mignon L., Yang, Jun J.
Published 2015

Rise and fall of subclones from diagnosis to relapse in pediatric B-acute lymphoblastic leukaemia

by Ma, Xiaotu, Edmonson, Michael, Yergeau, Donald, Muzny, Donna M., Hampton, Oliver A., Rusch, Michael, Song, Guangchun, Easton, John, Harvey, Richard C., Wheeler, David A., Ma, Jing, Doddapaneni, HarshaVardhan, Vadodaria, Bhavin, Wu, Gang, Nagahawatte, Panduka, Carroll, William L., Chen, I-Ming, Gastier-Foster, Julie M., Relling, Mary V., Smith, Malcolm A., Devidas, Meenakshi, Auvil, Jaime M. Guidry, Downing, James R., Loh, Mignon L., Willman, Cheryl L., Gerhard, Daniela S., Mullighan, Charles G., Hunger, Stephen P., Zhang, Jinghui
Published 2015

The genetic landscape of high-risk neuroblastoma

by Pugh, Trevor J., Morozova, Olena, Attiyeh, Edward F., Asgharzadeh, Shahab, Wei, Jun S., Auclair, Daniel, Carter, Scott L., Cibulskis, Kristian, Hanna, Megan, Kiezun, Adam, Kim, Jaegil, Lawrence, Michael S., Lichenstein, Lee, McKenna, Aaron, Pedamallu, Chandra Sekhar, Ramos, Alex H., Shefler, Erica, Sivachenko, Andrey, Sougnez, Carrie, Stewart, Chip, Ally, Adrian, Birol, Inanc, Chiu, Readman, Corbett, Richard D., Hirst, Martin, Jackman, Shaun D., Kamoh, Baljit, Khodabakshi, Alireza Hadj, Krzywinski, Martin, Lo, Allan, Moore, Richard A., Mungall, Karen L., Qian, Jenny, Tam, Angela, Thiessen, Nina, Zhao, Yongjun, Cole, Kristina A., Diamond, Maura, Diskin, Sharon J., Mosse, Yael P., Wood, Andrew C., Ji, Lingyun, Sposto, Richard, Badgett, Thomas, London, Wendy B., Moyer, Yvonne, Gastier-Foster, Julie M., Smith, Malcolm A., Auvil, Jaime M. Guidry, Gerhard, Daniela S., Hogarty, Michael D., Jones, Steven J. M., Lander, Eric S., Gabriel, Stacey B., Getz, Gad, Seeger, Robert C., Khan, Javed, Marra, Marco A., Meyerson, Matthew, Maris, John M.
Published 2013

Genome-wide Association Study Identifies Two Susceptibility Loci for Osteosarcoma

by Savage, Sharon A., Mirabello, Lisa, Wang, Zhaoming, Gastier-Foster, Julie M., Gorlick, Richard, Khanna, Chand, Flanagan, Adrienne M., Tirabosco, Roberto, Andrulis, Irene L., Wunder, Jay S., Gokgoz, Nalan, Patiño-Garcia, Ana, Sierrasesúmaga, Luis, Lecanda, Fernando, Kurucu, Nilgün, Ilhan, Inci Ergurhan, Sari, Neriman, Serra, Massimo, Hattinger, Claudia, Picci, Piero, Spector, Logan, Barkauskas, Donald A., Marina, Neyssa, de Toledo, Silvia Regina Caminada, Petrilli, Antonio S., Amary, Maria Fernanda, Halai, Dina, Thomas, David M., Douglass, Chester, Meltzer, Paul S., Jacobs, Kevin, Chung, Charles C., Berndt, Sonja I., Purdue, Mark P., Caporaso, Neil E., Tucker, Margaret, Rothman, Nathaniel, Landi, Maria Teresa, Silverman, Debra T., Kraft, Peter, Hunter, David J., Malats, Nuria, Kogevinas, Manolis, Wacholder, Sholom, Troisi, Rebecca, Helman, Lee, Fraumeni, Joseph F., Yeager, Meredith, Hoover, Robert N., Chanock, Stephen J.
Published 2013

Genomic analyses identify recurrent MEF2D fusions in acute lymphoblastic leukaemia

by Gu, Zhaohui, Churchman, Michelle, Roberts, Kathryn, Li, Yongjin, Liu, Yu, Harvey, Richard C., McCastlain, Kelly, Reshmi, Shalini C., Payne-Turner, Debbie, Iacobucci, Ilaria, Shao, Ying, Chen, I-Ming, Valentine, Marcus, Pei, Deqing, Mungall, Karen L., Mungall, Andrew J., Ma, Yussanne, Moore, Richard, Marra, Marco, Stonerock, Eileen, Gastier-Foster, Julie M., Devidas, Meenakshi, Dai, Yunfeng, Wood, Brent, Borowitz, Michael, Larsen, Eric E., Maloney, Kelly, Mattano Jr, Leonard A., Angiolillo, Anne, Salzer, Wanda L., Burke, Michael J., Gianni, Francesca, Spinelli, Orietta, Radich, Jerald P., Minden, Mark D., Moorman, Anthony V., Patel, Bella, Fielding, Adele K., Rowe, Jacob M., Luger, Selina M., Bhatia, Ravi, Aldoss, Ibrahim, Forman, Stephen J., Kohlschmidt, Jessica, Mrózek, Krzysztof, Marcucci, Guido, Bloomfield, Clara D., Stock, Wendy, Kornblau, Steven, Kantarjian, Hagop M., Konopleva, Marina, Paietta, Elisabeth, Willman, Cheryl L., L. Loh, Mignon, P. Hunger, Stephen, Mullighan, Charles G.
Published 2016

Comprehensive molecular characterization of gastric adenocarcinoma

by Bass, Adam J., Thorsson, Vesteinn, Shmulevich, Ilya, Reynolds, Sheila M., Miller, Michael, Bernard, Brady, Hinoue, Toshinori, Laird, Peter W., Curtis, Christina, Shen, Hui, Weisenberger, Daniel J., Schultz, Nikolaus, Shen, Ronglai, Weinhold, Nils, Kelsen, David P., Bowlby, Reanne, Chu, Andy, Kasaian, Katayoon, Mungall, Andrew J., Robertson, A. Gordon, Sipahimalani, Payal, Cherniack, Andrew, Getz, Gad, Liu, Yingchun, Noble, Michael S., Pedamallu, Chandra, Sougnez, Carrie, Taylor-Weiner, Amaro, Akbani, Rehan, Lee, Ju-Seog, Liu, Wenbin, Mills, Gordon B., Yang, Da, Zhang, Wei, Pantazi, Angeliki, Parfenov, Michael, Gulley, Margaret, Piazuelo, M. Blanca, Schneider, Barbara G., Kim, Jihun, Boussioutas, Alex, Sheth, Margi, Demchok, John A., Rabkin, Charles S., Willis, Joseph E., Ng, Sam, Garman, Katherine, Beer, David G., Pennathur, Arjun, Raphael, Benjamin J., Wu, Hsin-Ta, Odze, Robert, Kim, Hark K., Bowen, Jay, Leraas, Kristen M., Lichtenberg, Tara M., Weaver, Stephanie, McLellan, Michael, Wiznerowicz, Maciej, Sakai, Ryo, Getz, Gad, Sougnez, Carrie, Lawrence, Michael S., Cibulskis, Kristian, Lichtenstein, Lee, Fisher, Sheila, Gabriel, Stacey B., Lander, Eric S., Ding, Li, Niu, Beifang, Ally, Adrian, Balasundaram, Miruna, Birol, Inanc, Bowlby, Reanne, Brooks, Denise, Butterfield, Yaron S. N., Carlsen, Rebecca, Chu, Andy, Chu, Justin, Chuah, Eric, Chun, Hye-Jung E., Clarke, Amanda, Dhalla, Noreen, Guin, Ranabir, Holt, Robert A., Jones, Steven J.M., Kasaian, Katayoon, Lee, Darlene, Li, Haiyan A., Lim, Emilia, Ma, Yussanne, Marra, Marco A., Mayo, Michael, Moore, Richard A., Mungall, Andrew J., Mungall, Karen L., Nip, Ka Ming, Robertson, A. Gordon, Schein, Jacqueline E., Sipahimalani, Payal, Tam, Angela, Thiessen, Nina, Beroukhim, Rameen, Carter, Scott L., Cherniack, Andrew D., Cho, Juok, Cibulskis, Kristian, DiCara, Daniel, Frazer, Scott, Fisher, Sheila, Gabriel, Stacey B., Gehlenborg, Nils, Heiman, David I., Jung, Joonil, Kim, Jaegil, Lander, Eric S., Lawrence, Michael S., Lichtenstein, Lee, Lin, Pei, Meyerson, Matthew, Ojesina, Akinyemi I., Pedamallu, Chandra Sekhar, Saksena, Gordon, Schumacher, Steven E., Sougnez, Carrie, Stojanov, Petar, Tabak, Barbara, Taylor-Weiner, Amaro, Voet, Doug, Rosenberg, Mara, Zack, Travis I., Zhang, Hailei, Zou, Lihua, Protopopov, Alexei, Santoso, Netty, Parfenov, Michael, Lee, Semin, Zhang, Jianhua, Mahadeshwar, Harshad S., Tang, Jiabin, Ren, Xiaojia, Seth, Sahil, Yang, Lixing, Xu, Andrew W., Song, Xingzhi, Pantazi, Angeliki, Xi, Ruibin, Bristow, Christopher A., Hadjipanayis, Angela, Seidman, Jonathan, Chin, Lynda, Park, Peter J., Kucherlapati, Raju, Akbani, Rehan, Ling, Shiyun, Liu, Wenbin, Rao, Arvind, Weinstein, John N., Kim, Sang-Bae, Lee, Ju-Seog, Lu, Yiling, Mills, Gordon, Laird, Peter W., Hinoue, Toshinori, Weisenberger, Daniel J., Bootwalla, Moiz S., Lai, Phillip H., Shen, Hui, Triche, Timothy, Van Den Berg, David J., Baylin, Stephen B., Herman, James G., Getz, Gad, Chin, Lynda, Liu, Yingchun, Murray, Bradley A., Noble, Michael S., Askoy, B. Arman, Ciriello, Giovanni, Dresdner, Gideon, Gao, Jianjiong, Gross, Benjamin, Jacobsen, Anders, Lee, William, Ramirez, Ricardo, Sander, Chris, Schultz, Nikolaus, Senbabaoglu, Yasin, Sinha, Rileen, Sumer, S. Onur, Sun, Yichao, Weinhold, Nils, Thorsson, Vésteinn, Bernard, Brady, Iype, Lisa, Kramer, Roger W., Kreisberg, Richard, Miller, Michael, Reynolds, Sheila M., Rovira, Hector, Tasman, Natalie, Shmulevich, Ilya, Ng, Santa Cruz Sam, Haussler, David, Stuart, Josh M., Akbani, Rehan, Ling, Shiyun, Liu, Wenbin, Rao, Arvind, Weinstein, John N., Verhaak, Roeland G.W., Mills, Gordon B., Leiserson, Mark D. M., Raphael, Benjamin J., Wu, Hsin-Ta, Taylor, Barry S., Black, Aaron D., Bowen, Jay, Carney, Julie Ann, Gastier-Foster, Julie M., Helsel, Carmen, Leraas, Kristen M., Lichtenberg, Tara M., McAllister, Cynthia, Ramirez, Nilsa C., Tabler, Teresa R., Wise, Lisa, Zmuda, Erik, Penny, Robert, Crain, Daniel, Gardner, Johanna, Lau, Kevin, Curely, Erin, Mallery, David, Morris, Scott, Paulauskis, Joseph, Shelton, Troy, Shelton, Candace, Sherman, Mark, Benz, Christopher, Lee, Jae-Hyuk, Fedosenko, Konstantin, Manikhas, Georgy, Potapova, Olga, Voronina, Olga, Belyaev, Smitry, Dolzhansky, Oleg, Rathmell, W. Kimryn, Brzezinski, Jakub, Ibbs, Matthew, Korski, Konstanty, Kycler, Witold, ŁaŸniak, Radoslaw, Leporowska, Ewa, Mackiewicz, Andrzej, Murawa, Dawid, Murawa, Pawel, Spychała, Arkadiusz, Suchorska, Wiktoria M., Tatka, Honorata, Teresiak, Marek, Wiznerowicz, Maciej, Abdel-Misih, Raafat, Bennett, Joseph, Brown, Jennifer, Iacocca, Mary, Rabeno, Brenda, Kwon, Sun-Young, Penny, Robert, Gardner, Johanna, Kemkes, Ariane, Mallery, David, Morris, Scott, Shelton, Troy, Shelton, Candace, Curley, Erin, Alexopoulou, Iakovina, Engel, Jay, Bartlett, John, Albert, Monique, Park, Do-Youn, Dhir, Rajiv, Luketich, James, Landreneau, Rodney, Janjigian, Yelena Y., Kelsen, David P., Cho, Eunjung, Ladanyi, Marc, Tang, Laura, McCall, Shannon J., Park, Young S., Cheong, Jae-Ho, Ajani, Jaffer, Camargo, M. Constanza, Alonso, Shelley, Ayala, Brenda, Jensen, Mark A., Pihl, Todd, Raman, Rohini, Walton, Jessica, Wan, Yunhu, Demchok, John A., Eley, Greg, Mills Shaw, Kenna R., Sheth, Margi, Tarnuzzer, Roy, Wang, Zhining, Yang, Liming, Zenklusen, Jean Claude, Davidsen, Tanja, Hutter, Carolyn M., Sofia, Heidi J., Burton, Robert, Chudamani, Sudha, Liu, Jia
Published 2014