The Anolis Lizard Genome: An Amniote Genome without Isochores

by Fujita, Matthew K., Edwards, Scott V., Ponting, Chris P.
Published 2011

A Phylogenomic Approach to Vertebrate Phylogeny Supports a Turtle-Archosaur Affinity and a Possible Paraphyletic Lissamphibia

by Fong, Jonathan J., Brown, Jeremy M., Fujita, Matthew K., Boussau, Bastien
Published 2012

Speciation on the Rocks: Integrated Systematics of the Heteronotia spelea Species Complex (Gekkota; Reptilia) from Western and Central Australia

by Pepper, Mitzy, Doughty, Paul, Fujita, Matthew K., Moritz, Craig, Keogh, J. Scott
Published 2013

Limitations of Climatic Data for Inferring Species Boundaries: Insights from Speckled Rattlesnakes

by Meik, Jesse M., Streicher, Jeffrey W., Lawing, A. Michelle, Flores-Villela, Oscar, Fujita, Matthew K.
Published 2015

Two Low Coverage Bird Genomes and a Comparison of Reference-Guided versus De Novo Genome Assemblies

by Card, Daren C., Schield, Drew R., Reyes-Velasco, Jacobo, Fujita, Matthew K., Andrew, Audra L., Oyler-McCance, Sara J., Fike, Jennifer A., Tomback, Diana F., Ruggiero, Robert P., Castoe, Todd A.
Published 2014

Report from the First Snake Genomics and Integrative Biology Meeting

by Castoe, Todd A., Braun, Edward L., Bronikowski, Anne M., Cox, Christian L., Rabosky, Alison R. Davis, Jason de Koning, A.P., Dobry, Jason, Fujita, Matthew K., Giorgianni, Matt W, Hargreaves, Adam, Henkel, Christiaan V., Mackessy, Stephen P., O’Meally, Denis, Rokyta, Darin R., Secor, Stephen M., Streicher, Jeffrey W., Wray, Kenneth P., Yokoyama, Ken D., Pollock, David D.
Published 2012

Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment

by Li, Cai, Zhang, Yong, Li, Jianwen, Kong, Lesheng, Hu, Haofu, Pan, Hailin, Xu, Luohao, Deng, Yuan, Li, Qiye, Jin, Lijun, Yu, Hao, Chen, Yan, Liu, Binghang, Yang, Linfeng, Liu, Shiping, Zhang, Yan, Lang, Yongshan, Xia, Jinquan, He, Weiming, Shi, Qiong, Subramanian, Sankar, Millar, Craig D, Meader, Stephen, Rands, Chris M, Fujita, Matthew K, Greenwold, Matthew J, Castoe, Todd A, Pollock, David D, Gu, Wanjun, Nam, Kiwoong, Ellegren, Hans, Ho, Simon YW, Burt, David W, Ponting, Chris P, Jarvis, Erich D, Gilbert, M Thomas P, Yang, Huanming, Wang, Jian, Lambert, David M, Wang, Jun, Zhang, Guojie
Published 2014

Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes

by St John, John A, Braun, Edward L, Isberg, Sally R, Miles, Lee G, Chong, Amanda Y, Gongora, Jaime, Dalzell, Pauline, Moran, Christopher, Bed'Hom, Bertrand, Abzhanov, Arkhat, Burgess, Shane C, Cooksey, Amanda M, Castoe, Todd A, Crawford, Nicholas G, Densmore, Llewellyn D, Drew, Jennifer C, Edwards, Scott V, Faircloth, Brant C, Fujita, Matthew K, Greenwold, Matthew J, Hoffmann, Federico G, Howard, Jonathan M, Iguchi, Taisen, Janes, Daniel E, Khan, Shahid Yar, Kohno, Satomi, de Koning, AP Jason, Lance, Stacey L, McCarthy, Fiona M, McCormack, John E, Merchant, Mark E, Peterson, Daniel G, Pollock, David D, Pourmand, Nader, Raney, Brian J, Roessler, Kyria A, Sanford, Jeremy R, Sawyer, Roger H, Schmidt, Carl J, Triplett, Eric W, Tuberville, Tracey D, Venegas-Anaya, Miryam, Howard, Jason T, Jarvis, Erich D, Guillette, Louis J, Glenn, Travis C, Green, Richard E, Ray, David A
Published 2012

The genome of the green anole lizard and a comparative analysis with birds and mammals

by Alföldi, Jessica, Di Palma, Federica, Grabherr, Manfred, Williams, Christina, Kong, Lesheng, Mauceli, Evan, Russell, Pamela, Lowe, Craig B., Glor, Richard, Jaffe, Jacob D., Ray, David A., Boissinot, Stephane, Shedlock, Andrew M., Botka, Christopher, Castoe, Todd A., Colbourne, John K., Fujita, Matthew K., Moreno, Ricardo Godinez, ten Hallers, Boudewijn F., Haussler, David, Heger, Andreas, Heiman, David, Janes, Daniel E., Johnson, Jeremy, de Jong, Pieter J., Koriabine, Maxim Y., Novick, Peter, Organ, Chris L., Peach, Sally E., Poe, Steven, Pollock, David D., de Queiroz, Kevin, Sanger, Thomas, Searle, Steve, Smith, Jeremy D., Smith, Zachary, Swofford, Ross, Turner-Maier, Jason, Wade, Juli, Young, Sarah, Zadissa, Amonida, Edwards, Scott V., Glenn, Travis C., Schneider, Christopher J., Losos, Jonathan B., Lander, Eric S., Breen, Matthew, Ponting, Chris P., Lindblad-Toh, Kerstin
Published 2011

The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage

by Bradley Shaffer, H, Minx, Patrick, Warren, Daniel E, Shedlock, Andrew M, Thomson, Robert C, Valenzuela, Nicole, Abramyan, John, Amemiya, Chris T, Badenhorst, Daleen, Biggar, Kyle K, Borchert, Glen M, Botka, Christopher W, Bowden, Rachel M, Braun, Edward L, Bronikowski, Anne M, Bruneau, Benoit G, Buck, Leslie T, Capel, Blanche, Castoe, Todd A, Czerwinski, Mike, Delehaunty, Kim D, Edwards, Scott V, Fronick, Catrina C, Fujita, Matthew K, Fulton, Lucinda, Graves, Tina A, Green, Richard E, Haerty, Wilfried, Hariharan, Ramkumar, Hernandez, Omar, Hillier, LaDeana W, Holloway, Alisha K, Janes, Daniel, Janzen, Fredric J, Kandoth, Cyriac, Kong, Lesheng, de Koning, AP Jason, Li, Yang, Literman, Robert, McGaugh, Suzanne E, Mork, Lindsey, O'Laughlin, Michelle, Paitz, Ryan T, Pollock, David D, Ponting, Chris P, Radhakrishnan, Srihari, Raney, Brian J, Richman, Joy M, St John, John, Schwartz, Tonia, Sethuraman, Arun, Spinks, Phillip Q, Storey, Kenneth B, Thane, Nay, Vinar, Tomas, Zimmerman, Laura M, Warren, Wesley C, Mardis, Elaine R, Wilson, Richard K
Published 2013