Quantification of Cooperativity in Heterodimer-DNA Binding Improves the Accuracy of Binding Specificity Models*

by Isakova, Alina, Berset, Yves, Hatzimanikatis, Vassily, Deplancke, Bart
Published 2016

PDF Signaling Is an Integral Part of the Drosophila Circadian Molecular Oscillator

by Mezan, Shaul, Feuz, Jean Daniel, Deplancke, Bart, Kadener, Sebastian
Published 2016

A compendium of Caenhorabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks

by Reece-Hoyes, John S, Deplancke, Bart, Shingles, Jane, Grove, Christian A, Hope, Ian A, Walhout, Albertha JM
Published 2005

GETPrime: a gene- or transcript-specific primer database for quantitative real-time PCR

by Gubelmann, Carine, Gattiker, Alexandre, Massouras, Andreas, Hens, Korneel, David, Fabrice, Decouttere, Frederik, Rougemont, Jacques, Deplancke, Bart
Published 2011

iSLIM: a comprehensive approach to mapping and characterizing gene regulatory networks

by Rockel, Sylvie, Geertz, Marcel, Hens, Korneel, Deplancke, Bart, Maerkl, Sebastian J.
Published 2013

Genetic, molecular and physiological basis of variation in Drosophila gut immunocompetence

by Bou Sleiman, Maroun S., Osman, Dani, Massouras, Andreas, Hoffmann, Ary A., Lemaitre, Bruno, Deplancke, Bart
Published 2015

Potential Direct Regulators of the Drosophila yellow Gene Identified by Yeast One-Hybrid and RNAi Screens

by Kalay, Gizem, Lusk, Richard, Dome, Mackenzie, Hens, Korneel, Deplancke, Bart, Wittkopp, Patricia J.
Published 2016

An Evolutionarily Conserved Role for the Aryl Hydrocarbon Receptor in the Regulation of Movement

by Williams, Evan G., Mouchiroud, Laurent, Frochaux, Michael, Pandey, Ashutosh, Andreux, Pénélope A., Deplancke, Bart, Auwerx, Johan
Published 2014

Chromosome-Biased Binding and Gene Regulation by the Caenorhabditis elegans DRM Complex

by Tabuchi, Tomoko M., Deplancke, Bart, Osato, Naoki, Zhu, Lihua J., Barrasa, M. Inmaculada, Harrison, Melissa M., Horvitz, H. Robert, Walhout, Albertha J. M., Hagstrom, Kirsten A.
Published 2011

Topology and Dynamics of the Zebrafish Segmentation Clock Core Circuit

by Schröter, Christian, Ares, Saúl, Morelli, Luis G., Isakova, Alina, Hens, Korneel, Soroldoni, Daniele, Gajewski, Martin, Jülicher, Frank, Maerkl, Sebastian J., Deplancke, Bart, Oates, Andrew C.
Published 2012

A yeast one-hybrid and microfluidics-based pipeline to map mammalian gene regulatory networks

by Gubelmann, Carine, Waszak, Sebastian M, Isakova, Alina, Holcombe, Wiebke, Hens, Korneel, Iagovitina, Antonina, Feuz, Jean-Daniel, Raghav, Sunil K, Simicevic, Jovan, Deplancke, Bart
Published 2013

Global and Stage Specific Patterns of Krüppel-Associated-Box Zinc Finger Protein Gene Expression in Murine Early Embryonic Cells

by Corsinotti, Andrea, Kapopoulou, Adamandia, Gubelmann, Carine, Imbeault, Michael, Santoni de Sio, Francesca R., Rowe, Helen M., Mouscaz, Yoann, Deplancke, Bart, Trono, Didier
Published 2013

GLUT3 is induced during epithelial-mesenchymal transition and promotes tumor cell proliferation in non-small cell lung cancer

by Masin, Mark, Vazquez, Jessica, Rossi, Simona, Groeneveld, Svenja, Samson, Natasha, Schwalie, Petra C, Deplancke, Bart, Frawley, Laura E, Gouttenoire, Jérôme, Moradpour, Darius, Oliver, Trudy G, Meylan, Etienne
Published 2014

Conservation of transcription factor binding specificities across 600 million years of bilateria evolution

by Nitta, Kazuhiro R, Jolma, Arttu, Yin, Yimeng, Morgunova, Ekaterina, Kivioja, Teemu, Akhtar, Junaid, Hens, Korneel, Toivonen, Jarkko, Deplancke, Bart, Furlong, Eileen E M, Taipale, Jussi
Published 2015

Genome-Wide RNA Polymerase II Profiles and RNA Accumulation Reveal Kinetics of Transcription and Associated Epigenetic Changes During Diurnal Cycles

by Le Martelot, Gwendal, Canella, Donatella, Symul, Laura, Migliavacca, Eugenia, Gilardi, Federica, Liechti, Robin, Martin, Olivier, Harshman, Keith, Delorenzi, Mauro, Desvergne, Béatrice, Herr, Winship, Deplancke, Bart, Schibler, Ueli, Rougemont, Jacques, Guex, Nicolas, Hernandez, Nouria, Naef, Felix
Published 2012

Genomic Variation and Its Impact on Gene Expression in Drosophila melanogaster

by Massouras, Andreas, Waszak, Sebastian M., Albarca-Aguilera, Monica, Hens, Korneel, Holcombe, Wiebke, Ayroles, Julien F., Dermitzakis, Emmanouil T., Stone, Eric A., Jensen, Jeffrey D., Mackay, Trudy F. C., Deplancke, Bart
Published 2012

Identification of the transcription factor ZEB1 as a central component of the adipogenic gene regulatory network

by Gubelmann, Carine, Schwalie, Petra C, Raghav, Sunil K, Röder, Eva, Delessa, Tenagne, Kiehlmann, Elke, Waszak, Sebastian M, Corsinotti, Andrea, Udin, Gilles, Holcombe, Wiebke, Rudofsky, Gottfried, Trono, Didier, Wolfrum, Christian, Deplancke, Bart
Published 2014