Detection and interpretation of metabolite–transcript coresponses using combined profiling data

by Redestig, Henning, Costa, Ivan G.
Published 2011

Gene expression trees in lymphoid development

by Costa, Ivan G, Roepcke, Stefan, Schliep, Alexander
Published 2007

pGQL: A probabilistic graphical query language for gene expression time courses

by Schilling, Ruben, Costa, Ivan G, Schliep, Alexander
Published 2011

Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data

by Costa, Ivan G, Krause, Roland, Opitz, Lennart, Schliep, Alexander
Published 2007

On the selection of appropriate distances for gene expression data clustering

by Jaskowiak, Pablo A, Campello, Ricardo JGB, Costa, Ivan G
Published 2014

Impact of missing data imputation methods on gene expression clustering and classification

by de Souto, Marcilio CP, Jaskowiak, Pablo A, Costa, Ivan G
Published 2015

Discovering motifs that induce sequencing errors

by Allhoff, Manuel, Schönhuth, Alexander, Martin, Marcel, Costa, Ivan G, Rahmann, Sven, Marschall, Tobias
Published 2013

A multiple kernel learning algorithm for drug-target interaction prediction

by Nascimento, André C. A., Prudêncio, Ricardo B. C., Costa, Ivan G.
Published 2016

DNA methylation levels at individual age-associated CpG sites can be indicative for life expectancy

by Lin, Qiong, Weidner, Carola I., Costa, Ivan G., Marioni, Riccardo E., Ferreira, Marcelo R. P., Deary, Ian J., Wagner, Wolfgang
Published 2016

The interaction of MYC with the trithorax protein ASH2L promotes gene transcription by regulating H3K27 modification

by Ullius, Andrea, Lüscher-Firzlaff, Juliane, Costa, Ivan G., Walsemann, Gesa, Forst, Alexandra H., Gusmao, Eduardo G., Kapelle, Karsten, Kleine, Henning, Kremmer, Elisabeth, Vervoorts, Jörg, Lüscher, Bernhard
Published 2014

Epigenetic Classification of Human Mesenchymal Stromal Cells

by de Almeida, Danilo Candido, Ferreira, Marcelo R.P., Franzen, Julia, Weidner, Carola I., Frobel, Joana, Zenke, Martin, Costa, Ivan G., Wagner, Wolfgang
Published 2016

Replicative senescence is associated with nuclear reorganization and with DNA methylation at specific transcription factor binding sites

by Hänzelmann, Sonja, Beier, Fabian, Gusmao, Eduardo G, Koch, Carmen M, Hummel, Sebastian, Charapitsa, Iryna, Joussen, Sylvia, Benes, Vladimir, Brümmendorf, Tim H, Reid, George, Costa, Ivan G, Wagner, Wolfgang
Published 2015

Epigenetic age predictions based on buccal swabs are more precise in combination with cell type-specific DNA methylation signatures

by Eipel, Monika, Mayer, Felix, Arent, Tanja, Ferreira, Marcelo R. P., Birkhofer, Carina, Gerstenmaier, Uwe, Costa, Ivan G., Ritz-Timme, Stefanie, Wagner, Wolfgang
Published 2016

A time frame permissive for Protein Kinase D2 activity to direct angiogenesis in mouse embryonic stem cells

by Müller, Martin, Schröer, Jana, Azoitei, Ninel, Eiseler, Tim, Bergmann, Wendy, Köhntop, Ralf, Lin, Qiong, Costa, Ivan G, Zenke, Martin, Genze, Felicitas, Weidgang, Clair, Seufferlein, Thomas, Liebau, Stefan, Kleger, Alexander
Published 2015

Epigenetic program and transcription factor circuitry of dendritic cell development

by Lin, Qiong, Chauvistré, Heike, Costa, Ivan G., Gusmao, Eduardo G., Mitzka, Saskia, Hänzelmann, Sonja, Baying, Bianka, Klisch, Theresa, Moriggl, Richard, Hennuy, Benoit, Smeets, Hubert, Hoffmann, Kurt, Benes, Vladimir, Seré, Kristin, Zenke, Martin
Published 2015

Thrombin stimulates insulin secretion via protease-activated receptor-3

by Hänzelmann, Sonja, Wang, Jinling, Güney, Emre, Tang, Yunzhao, Zhang, Enming, Axelsson, Annika S, Nenonen, Hannah, Salehi, Albert S, Wollheim, Claes B, Zetterberg, Eva, Berntorp, Erik, Costa, Ivan G, Castelo, Robert, Rosengren, Anders H
Published 2016

The lncRNA HOTAIR impacts on mesenchymal stem cells via triple helix formation

by Kalwa, Marie, Hänzelmann, Sonja, Otto, Sabrina, Kuo, Chao-Chung, Franzen, Julia, Joussen, Sylvia, Fernandez-Rebollo, Eduardo, Rath, Björn, Koch, Carmen, Hofmann, Andrea, Lee, Shih-Han, Teschendorff, Andrew E., Denecke, Bernd, Lin, Qiong, Widschwendter, Martin, Weinhold, Elmar, Costa, Ivan G., Wagner, Wolfgang
Published 2016