Genomic data integration for ecological and evolutionary traits in non-model organisms

by Tagu, Denis, Colbourne, John K, Nègre, Nicolas
Published 2014

Profiling sex-biased gene expression during parthenogenetic reproduction in Daphnia pulex

by Eads, Brian D, Colbourne, John K, Bohuski, Elizabeth, Andrews, Justen
Published 2007

wFleaBase: the Daphnia genome database

by Colbourne, John K, Singan, Vasanth R, Gilbert, Don G
Published 2005

Ionotropic Glutamate Receptors Mediate Inducible Defense in the Water Flea Daphnia pulex

by Miyakawa, Hitoshi, Sato, Masanao, Colbourne, John K., Iguchi, Taisen
Published 2015

Sampling Daphnia's expressed genes: preservation, expansion and invention of crustacean genes with reference to insect genomes

by Colbourne, John K, Eads, Brian D, Shaw, Joseph, Bohuski, Elizabeth, Bauer, Darren J, Andrews, Justen
Published 2007

Identification of maternally-loaded RNA transcripts in unfertilized eggs of Tribolium castaneum

by Preuss, Kevin M, Lopez, Jacqueline A, Colbourne, John K, Wade, Michael J
Published 2012

Why so many unknown genes? Partitioning orphans from a representative transcriptome of the lone star tick Amblyomma americanum

by Gibson, Amanda K, Smith, Zach, Fuqua, Clay, Clay, Keith, Colbourne, John K
Published 2013

Male meiosis in Crustacea: synapsis, recombination, epigenetics and fertility in Daphnia magna

by Gómez, Rocío, Van Damme, Kay, Gosálvez, Jaime, Morán, Eugenio Sánchez, Colbourne, John K.
Published 2015

Predator-induced defences in Daphnia pulex: Selection and evaluation of internal reference genes for gene expression studies with real-time PCR

by Spanier, Katina I, Leese, Florian, Mayer, Christoph, Colbourne, John K, Gilbert, Don, Pfrender, Michael E, Tollrian, Ralph
Published 2010

Testosterone Affects Neural Gene Expression Differently in Male and Female Juncos: A Role for Hormones in Mediating Sexual Dimorphism and Conflict

by Peterson, Mark P., Rosvall, Kimberly A., Choi, Jeong-Hyeon, Ziegenfus, Charles, Tang, Haixu, Colbourne, John K., Ketterson, Ellen D.
Published 2013

Function and Evolution of DNA Methylation in Nasonia vitripennis

by Wang, Xu, Wheeler, David, Avery, Amanda, Rago, Alfredo, Choi, Jeong-Hyeon, Colbourne, John K., Clark, Andrew G., Werren, John H.
Published 2013

Evolutionary divergence of core and post-translational circadian clock genes in the pitcher-plant mosquito, Wyeomyia smithii

by Tormey, Duncan, Colbourne, John K., Mockaitis, Keithanne, Choi, Jeong-Hyeon, Lopez, Jacqueline, Burkhart, Joshua, Bradshaw, William, Holzapfel, Christina
Published 2015

Functional genomics of acclimation and adaptation in response to thermal stress in Daphnia

by Yampolsky, Lev Y, Zeng, Erliang, Lopez, Jacqueline, Williams, Patricia J, Dick, Kenneth B, Colbourne, John K, Pfrender, Michael E
Published 2014

Gene response profiles for Daphnia pulex exposed to the environmental stressor cadmium reveals novel crustacean metallothioneins

by Shaw, Joseph R, Colbourne, John K, Davey, Jennifer C, Glaholt, Stephen P, Hampton, Thomas H, Chen, Celia Y, Folt, Carol L, Hamilton, Joshua W
Published 2007

Fine-Scale Mapping of the Nasonia Genome to Chromosomes Using a High-Density Genotyping Microarray

by Desjardins, Christopher A., Gadau, Jürgen, Lopez, Jacqueline A., Niehuis, Oliver, Avery, Amanda R., Loehlin, David W., Richards, Stephen, Colbourne, John K., Werren, John H.
Published 2013

Genome-Wide Transcription Profiles Reveal Genotype-Dependent Responses of Biological Pathways and Gene-Families in Daphnia Exposed to Single and Mixed Stressors

by De Coninck, Dieter I. M., Asselman, Jana, Glaholt, Stephen, Janssen, Colin R., Colbourne, John K., Shaw, Joseph R., De Schamphelaere, Karel A. C.
Published 2014

OGS2: genome re-annotation of the jewel wasp Nasonia vitripennis

by Rago, Alfredo, Gilbert, Donald G., Choi, Jeong-Hyeon, Sackton, Timothy B., Wang, Xu, Kelkar, Yogeshwar D., Werren, John H., Colbourne, John K.
Published 2016

Gut Pathology and Responses to the Microsporidium Nosema ceranae in the Honey Bee Apis mellifera

by Dussaubat, Claudia, Brunet, Jean-Luc, Higes, Mariano, Colbourne, John K., Lopez, Jacqueline, Choi, Jeong-Hyeon, Martín-Hernández, Raquel, Botías, Cristina, Cousin, Marianne, McDonnell, Cynthia, Bonnet, Marc, Belzunces, Luc P., Moritz, Robin F. A., Le Conte, Yves, Alaux, Cédric
Published 2012

Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing

by Lee, Eun-Joon, Pei, Lirong, Srivastava, Gyan, Joshi, Trupti, Kushwaha, Garima, Choi, Jeong-Hyeon, Robertson, Keith D., Wang, Xinguo, Colbourne, John K., Zhang, Lu, Schroth, Gary P., Xu, Dong, Zhang, Kun, Shi, Huidong
Published 2011

Molecular cloning of doublesex genes of four cladocera (water flea) species

by Toyota, Kenji, Kato, Yasuhiko, Sato, Masaru, Sugiura, Naomi, Miyagawa, Shinichi, Miyakawa, Hitoshi, Watanabe, Hajime, Oda, Shigeto, Ogino, Yukiko, Hiruta, Chizue, Mizutani, Takeshi, Tatarazako, Norihisa, Paland, Susanne, Jackson, Craig, Colbourne, John K, Iguchi, Taisen
Published 2013