Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisit...

by Cheng, Lin-Yang, Liu, Yansheng, Chang, Ching-Yun, Röst, Hannes, Aebersold, Ruedi, Vitek, Olga
Published 2015

MS1 Peptide Ion Intensity Chromatograms in MS2 (SWATH) Data Independent Acquisitions. Improving Post Acquisition Analysis of Proteomic Experiments*

by Rardin, Matthew J., Schilling, Birgit, Cheng, Lin-Yang, MacLean, Brendan X., Sorensen, Dylan J., Sahu, Alexandria K., MacCoss, Michael J., Vitek, Olga, Gibson, Bradford W.
Published 2015

The role of HGF-MET pathway and CCDC66 cirRNA expression in EGFR resistance and epithelial-to-mesenchymal transition of lung adenocarcinoma cells

by Nithila A. Joseph, Shiow-Her Chiou, Zoe Lung, Cheng-Lin Yang, Tze-Yi Lin, Hui-Wen Chang, H. Sunny Sun, Sachin Kumar Gupta, Laising Yen, Shulhn-Der Wang, Kuan-Chih Chow
Published 2018-05-01

Extending the Limits of Quantitative Proteome Profiling with Data-Independent Acquisition and Application to Acetaminophen-Treated Three-Dimensional Liver Microtissues*

by Bruderer, Roland, Bernhardt, Oliver M., Gandhi, Tejas, Miladinović, Saša M., Cheng, Lin-Yang, Messner, Simon, Ehrenberger, Tobias, Zanotelli, Vito, Butscheid, Yulia, Escher, Claudia, Vitek, Olga, Rinner, Oliver, Reiter, Lukas
Published 2015

Quantitative variability of 342 plasma proteins in a human twin population

by Liu, Yansheng, Buil, Alfonso, Collins, Ben C, Gillet, Ludovic CJ, Blum, Lorenz C, Cheng, Lin-Yang, Vitek, Olga, Mouritsen, Jeppe, Lachance, Genevieve, Spector, Tim D, Dermitzakis, Emmanouil T, Aebersold, Ruedi
Published 2015