Epigenetic reprogramming in the mammalian germline

by Hsu, Fei-Man, Clark, Amander, Chen, Pao-Yang
Published 2015

Profiling genome-wide DNA methylation

by Yong, Wai-Shin, Hsu, Fei-Man, Chen, Pao-Yang
Published 2016

A comparative analysis of DNA methylation across human embryonic stem cell lines

by Chen, Pao-Yang, Feng, Suhua, Joo, Jong Wha Joanne, Jacobsen, Steve E, Pellegrini, Matteo
Published 2011

MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data

by Liao, Wen-Wei, Yen, Ming-Ren, Ju, Evaline, Hsu, Fei-Man, Lam, Larry, Chen, Pao-Yang
Published 2015

BS-Seeker2: a versatile aligning pipeline for bisulfite sequencing data

by Guo, Weilong, Fiziev, Petko, Yan, Weihong, Cokus, Shawn, Sun, Xueguang, Zhang, Michael Q, Chen, Pao-Yang, Pellegrini, Matteo
Published 2013

Non-exhaustive DNA methylation-mediated transposon silencing in the black truffle genome, a complex fungal genome with massive repeat element content

by Montanini, Barbara, Chen, Pao-Yang, Morselli, Marco, Jaroszewicz, Artur, Lopez, David, Martin, Francis, Ottonello, Simone, Pellegrini, Matteo
Published 2014

A comprehensive resource of genomic, epigenomic and transcriptomic sequencing data for the black truffle Tuber melanosporum

by Chen, Pao-Yang, Montanini, Barbara, Liao, Wen-Wei, Morselli, Marco, Jaroszewicz, Artur, Lopez, David, Ottonello, Simone, Pellegrini, Matteo
Published 2014

Fly-DPI: database of protein interactomes for D. melanogaster in the approach of systems biology

by Lin, Chung-Yen, Chen, Shu-Hwa, Cho, Chi-Shiang, Chen, Chia-Ling, Lin, Fan-Kai, Lin, Chieh-Hua, Chen, Pao-Yang, Lo, Chen-Zen, Hsiung, Chao A
Published 2006

Epigenetic changes mediated by polycomb repressive complex 2 and E2a are associated with drug resistance in a mouse model of lymphoma

by Flinders, Colin, Lam, Larry, Rubbi, Liudmilla, Ferrari, Roberto, Fitz-Gibbon, Sorel, Chen, Pao-Yang, Thompson, Michael, Christofk, Heather, B Agus, David, Ruderman, Daniel, Mallick, Parag, Pellegrini, Matteo
Published 2016

The effects of perinatal testosterone exposure on the DNA methylome of the mouse brain are late-emerging

by Ghahramani, Negar M, Ngun, Tuck C, Chen, Pao-Yang, Tian, Yuan, Krishnan, Sangitha, Muir, Stephanie, Rubbi, Liudmilla, Arnold, Arthur P, de Vries, Geert J, Forger, Nancy G, Pellegrini, Matteo, Vilain, Eric
Published 2014