Statistical characterization of multiple-reaction monitoring mass spectrometry (MRM-MS) assays for quantitative proteomics

by Mani, D R, Abbatiello, Susan E, Carr, Steven A
Published 2012

The Matrisome: In Silico Definition and In Vivo Characterization by Proteomics of Normal and Tumor Extracellular Matrices*

by Naba, Alexandra, Clauser, Karl R., Hoersch, Sebastian, Liu, Hui, Carr, Steven A., Hynes, Richard O.
Published 2012

Identification of Trypanosome Proteins in Plasma from African Sleeping Sickness Patients Infected with T. b. rhodesiense

by Eyford, Brett A., Ahmad, Rushdy, Enyaru, John C., Carr, Steven A., Pearson, Terry W.
Published 2013

Extracellular matrix signatures of human mammary carcinoma identify novel metastasis promoters

by Naba, Alexandra, Clauser, Karl R, Lamar, John M, Carr, Steven A, Hynes, Richard O
Published 2014

On Credibility, Clarity, and Compliance

by Burlingame, Al, Carr, Steven A., Bradshaw, Ralph A., Chalkley, Robert J.
Published 2015

H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions

by Ku, Manching, Jaffe, Jacob D, Koche, Richard P, Rheinbay, Esther, Endoh, Mitsuhiro, Koseki, Haruhiko, Carr, Steven A, Bernstein, Bradley E
Published 2012

Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver

by Naba, Alexandra, Clauser, Karl R, Whittaker, Charles A, Carr, Steven A, Tanabe, Kenneth K, Hynes, Richard O
Published 2014

CDK5 is a major regulator of the tumor suppressor DLC1

by Tripathi, Brajendra K., Qian, Xiaolan, Mertins, Philipp, Wang, Dunrui, Papageorge, Alex G., Carr, Steven A., Lowy, Douglas R.
Published 2014

Quantification of Proteins Using Peptide Immunoaffinity Enrichment Coupled with Mass Spectrometry

by Zhao, Lei, Whiteaker, Jeffrey R., Pope, Matthew E., Kuhn, Eric, Jackson, Angela, Anderson, N. Leigh, Pearson, Terry W., Carr, Steven A., Paulovich, Amanda G.
Published 2011

Mycobacterial Esx-3 Requires Multiple Components for Iron Acquisition

by Siegrist, M. Sloan, Steigedal, Magnus, Ahmad, Rushdy, Mehra, Alka, Dragset, Marte S., Schuster, Brian M., Philips, Jennifer A., Carr, Steven A., Rubin, Eric J.
Published 2014

Cdk5 Is Required for Memory Function and Hippocampal Plasticity via the cAMP Signaling Pathway

by Guan, Ji-Song, Su, Susan C., Gao, Jun, Joseph, Nadine, Xie, Zhigang, Zhou, Ying, Durak, Omer, Zhang, Lei, Zhu, J. Julius, Clauser, Karl R., Carr, Steven A., Tsai, Li-Huei
Published 2011

Selective killing of cancer cells with a small molecule targeting stress response to ROS

by Raj, Lakshmi, Ide, Takao, Gurkar, Aditi U, Foley, Michael, Schenone, Monica, Li, Xiaoyu, Tolliday, Nicola J., Golub, Todd R., Carr, Steven A., Shamji, Alykhan F., Stern, Andrew M., Mandinova, Anna, Schreiber, Stuart L., Lee, Sam W.
Published 2011

Quantitative-Proteomic Comparison of Alpha and Beta Cells to Uncover Novel Targets for Lineage Reprogramming

by Choudhary, Amit, Hu He, Kaihui, Mertins, Philipp, Udeshi, Namrata D., Dančík, Vlado, Fomina-Yadlin, Dina, Kubicek, Stefan, Clemons, Paul A., Schreiber, Stuart L., Carr, Steven A., Wagner, Bridget K.
Published 2014

Mitochondrial dysfunction remodels one-carbon metabolism in human cells

by Bao, Xiaoyan Robert, Ong, Shao-En, Goldberger, Olga, Peng, Jun, Sharma, Rohit, Thompson, Dawn A, Vafai, Scott B, Cox, Andrew G, Marutani, Eizo, Ichinose, Fumito, Goessling, Wolfram, Regev, Aviv, Carr, Steven A, Clish, Clary B, Mootha, Vamsi K
Published 2016

Demonstrating the feasibility of large-scale development of standardized assays to quantify human proteins

by Kennedy, Jacob J., Abbatiello, Susan E., Kim, Kyunggon, Yan, Ping, Whiteaker, Jeffrey R., Lin, Chenwei, Kim, Jun Seok, Zhang, Yuzheng, Wang, Xianlong, Ivey, Richard G., Zhao, Lei, Min, Hophil, Lee, Youngju, Yu, Myeong-Hee, Yang, Eun Gyeong, Lee, Cheolju, Wang, Pei, Rodriguez, Henry, Kim, Youngsoo, Carr, Steven A., Paulovich, Amanda G.
Published 2013

Lenalidomide induces ubiquitination and degradation of CK1α in del(5q) MDS

by Krönke, Jan, Fink, Emma C., Hollenbach, Paul W., MacBeth, Kyle J., Hurst, Slater N., Udeshi, Namrata D., Chamberlain, Philip P., Mani, D.R., Man, Hon Wah, Gandhi, Anita K., Svinkina, Tanya, Schneider, Rebekka K., McConkey, Marie, Järås, Marcus, Griffiths, Elizabeth, Wetzler, Meir, Bullinger, Lars, Cathers, Brian E., Carr, Steven A., Chopra, Rajesh, Ebert, Benjamin L.
Published 2015

Reconstituted B cell receptor signaling reveals carbohydrate-dependent mode of activation

by Villar, Rina F., Patel, Jinal, Weaver, Grant C., Kanekiyo, Masaru, Wheatley, Adam K., Yassine, Hadi M., Costello, Catherine E., Chandler, Kevin B., McTamney, Patrick. M., Nabel, Gary J., McDermott, Adrian B., Mascola, John R., Carr, Steven A., Lingwood, Daniel
Published 2016

Identification of cancer cytotoxic modulators of PDE3A by predictive chemogenomics

by de Waal, Luc, Lewis, Timothy A., Rees, Matthew G., Tsherniak, Aviad, Wu, Xiaoyun, Choi, Peter S., Gechijian, Lara, Hartigan, Christina, Faloon, Patrick W., Hickey, Mark J., Tolliday, Nicola, Carr, Steven A., Clemons, Paul A., Munoz, Benito, Wagner, Bridget K., Shamji, Alykhan F., Koehler, Angela N., Schenone, Monica, Burgin, Alex B., Schreiber, Stuart L., Greulich, Heidi, Meyerson, Matthew
Published 2015

Integrated Genomics of Crohn’s Disease Risk Variant Identifies a Role for CLEC12A in Antibacterial Autophagy

by Begun, Jakob, Lassen, Kara G., Jijon, Humberto B., Baxt, Leigh A., Goel, Gautam, Heath, Robert J., Ng, Aylwin, Tam, Jenny M., Kuo, Szu-Yu, Villablanca, Eduardo J., Fagbami, Lola, Oosting, Marije, Kumar, Vinod, Schenone, Monica, Carr, Steven A., Joosten, Leo A.B., Vyas, Jatin M., Daly, Mark J., Netea, Mihai G., Brown, Gordon D., Wijmenga, Cisca, Xavier, Ramnik J.
Published 2015

An Unbiased Approach To Identify Endogenous Substrates of “Histone” Deacetylase 8

by Olson, David E., Udeshi, Namrata D., Wolfson, Noah A., Pitcairn, Carol Ann, Sullivan, Eric D., Jaffe, Jacob D., Svinkina, Tanya, Natoli, Ted, Lu, Xiaodong, Paulk, Joshiawa, McCarren, Patrick, Wagner, Florence F., Barker, Doug, Howe, Eleanor, Lazzaro, Fanny, Gale, Jennifer P., Zhang, Yan-Ling, Subramanian, Aravind, Fierke, Carol A., Carr, Steven A., Holson, Edward B.
Published 2014