CATdb: a public access to Arabidopsis transcriptome data from the URGV-CATMA platform

by Gagnot, Séverine, Tamby, Jean-Philippe, Martin-Magniette, Marie-Laure, Bitton, Frédérique, Taconnat, Ludivine, Balzergue, Sandrine, Aubourg, Sébastien, Renou, Jean-Pierre, Lecharny, Alain, Brunaud, Véronique
Published 2008

Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome

by Aubourg, Sébastien, Martin-Magniette, Marie-Laure, Brunaud, Véronique, Taconnat, Ludivine, Bitton, Frédérique, Balzergue, Sandrine, Jullien, Pauline E, Ingouff, Mathieu, Thareau, Vincent, Schiex, Thomas, Lecharny, Alain, Renou, Jean-Pierre
Published 2007

Exploration of plant genomes in the FLAGdb++ environment

by Dèrozier, Sandra, Samson, Franck, Tamby, Jean-Philippe, Guichard, Cécile, Brunaud, Véronique, Grevet, Philippe, Gagnot, Séverine, Label, Philippe, Leplé, Jean-Charles, Lecharny, Alain, Aubourg, Sébastien
Published 2011

Functional analysis of Arabidopsis immune-related MAPKs uncovers a role for MPK3 as negative regulator of inducible defences

by Frei dit Frey, Nicolas, Garcia, Ana Victoria, Bigeard, Jean, Zaag, Rim, Bueso, Eduardo, Garmier, Marie, Pateyron, Stéphanie, de Tauzia-Moreau, Marie-Ludivine, Brunaud, Véronique, Balzergue, Sandrine, Colcombet, Jean, Aubourg, Sébastien, Martin-Magniette, Marie-Laure, Hirt, Heribert
Published 2014

In plants, decapping prevents RDR6-dependent production of small interfering RNAs from endogenous mRNAs

by Martínez de Alba, Angel Emilio, Moreno, Ana Beatriz, Gabriel, Marc, Mallory, Allison C., Christ, Aurélie, Bounon, Rémi, Balzergue, Sandrine, Aubourg, Sebastien, Gautheret, Daniel, Crespi, Martin D., Vaucheret, Hervé, Maizel, Alexis
Published 2015

The RNA Helicases AtMTR4 and HEN2 Target Specific Subsets of Nuclear Transcripts for Degradation by the Nuclear Exosome in Arabidopsis thaliana

by Lange, Heike, Zuber, Hélène, Sement, François M., Chicher, Johana, Kuhn, Lauriane, Hammann, Philippe, Brunaud, Véronique, Bérard, Caroline, Bouteiller, Nathalie, Balzergue, Sandrine, Aubourg, Sébastien, Martin-Magniette, Marie-Laure, Vaucheret, Hervé, Gagliardi, Dominique
Published 2014

GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response

by Zaag, Rim, Tamby, Jean Philippe, Guichard, Cécile, Tariq, Zakia, Rigaill, Guillem, Delannoy, Etienne, Renou, Jean-Pierre, Balzergue, Sandrine, Mary-Huard, Tristan, Aubourg, Sébastien, Martin-Magniette, Marie-Laure, Brunaud, Véronique
Published 2015

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

by Roudier, François, Ahmed, Ikhlak, Bérard, Caroline, Sarazin, Alexis, Mary-Huard, Tristan, Cortijo, Sandra, Bouyer, Daniel, Caillieux, Erwann, Duvernois-Berthet, Evelyne, Al-Shikhley, Liza, Giraut, Laurène, Després, Barbara, Drevensek, Stéphanie, Barneche, Frédy, Dèrozier, Sandra, Brunaud, Véronique, Aubourg, Sébastien, Schnittger, Arp, Bowler, Chris, Martin-Magniette, Marie-Laure, Robin, Stéphane, Caboche, Michel, Colot, Vincent
Published 2011

GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts

by Aubourg, Sébastien, Brunaud, Véronique, Bruyère, Clémence, Cock, Mark, Cooke, Richard, Cottet, Annick, Couloux, Arnaud, Déhais, Patrice, Deléage, Gilbert, Duclert, Aymeric, Echeverria, Manuel, Eschbach, Aimée, Falconet, Denis, Filippi, Ghislain, Gaspin, Christine, Geourjon, Christophe, Grienenberger, Jean-Michel, Houlné, Guy, Jamet, Elisabeth, Lechauve, Frédéric, Leleu, Olivier, Leroy, Philippe, Mache, Régis, Meyer, Christian, Nedjari, Hafed, Negrutiu, Ioan, Orsini, Valérie, Peyretaillade, Eric, Pommier, Cyril, Raes, Jeroen, Risler, Jean-Loup, Rivière, Stéphane, Rombauts, Stéphane, Rouzé, Pierre, Schneider, Michel, Schwob, Philippe, Small, Ian, Soumayet-Kampetenga, Ghislain, Stankovski, Darko, Toffano, Claire, Tognolli, Michael, Caboche, Michel, Lecharny, Alain
Published 2005