Search Results - Data lineage

On-line Tracking of Cells and Their Lineage from Time Lapse Video Data by Dat Nguyen, T., Kim, Du Yong

“…In this paper, we propose an algorithm for tracking cells that also provides lineage information. Our approach incorporates cell spawning into the random finite set dynamic model of the cell population, which allows the Bayes multi-object filter to capture information on the cells ancestries. …”
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Tracking Cells and Their Lineages Via Labeled Random Finite Sets by Nguyen, Tran Thien Dat, Vo, Ba-Ngu, Vo, Ba Tuong, Kim, Du Yong, Choi, Y.S.

“…This paper proposes novel online algorithms for jointly tracking and resolving lineages of an unknown and time-varying number of cells from time-lapse video data. …”
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Lineage diversification of pigeon paramyxovirus effect re-emergence potential in chickens by Yee, Ling Chong, Oekyung, Kim, Ross, Mary

“…This genotype of avian paramyxovirus type 1 has diversified rapidly since its introduction into the US in 1982 resulting in two extant lineages, which have different population growth properties. …”
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Perspectives on ancestral lineages and genetic markers of Malay population in Peninsular Malaysia by Shalini Parthipan, Seri Mirianti Ishar

“…Therefore, identification of specific genetic markers for Malay population is vital to facilitate forensic investigation. We gathered data by systematically searched with Google Scholar, Pubmed, Science Direct with advanced search builder for papers titles with Malay population and genetic markers. …”
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Investigating the role of Gfi1s/1b transcription factors in the HSC-derived thrombocyte lineage by Jaddah, Mariam

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Transient accumulation of 5-carboxylcytosine indicates involvement of active demethylation in lineage specification of neural stem cells by Wheldon, Lee M., Abakir, Abdulkadir, Ferjentsik, Zoltan, Dudnakova, Tatiana, Strohbuecker, Stephanie, Christie, Denise, Dai, Nan, Guan, Shengxi, Foster, Jeremy M., Corrêa, Ivan R, Loose, Matthew, Dixon, James E., Sottile, Virginie, Johnson, Andrew D., Ruzov, Alexey

“…Moreover, 5caC is enriched at the cell-type-specific promoters during differentiation of NSCs, and TDG knockdown leads to increased 5fC/5caC levels in differentiating NSCs. Our data suggest that active demethylation contributes to epigenetic reprogramming determining lineage specification in embryonic brain.…”
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Ancient polymorphism within hylarana signata (amphibia: anura: Ranidae) lineages of west (peninsular) and east (Sarawak, Borneo) Malaysia by Ramlah, Zainudin, Badrul Munir, Md Zain, Shukor, Md Nor, Mustafa, Abdul Rahman, Norhayati, Ahmad

“…Data from Tasik Chini, Pahang, West (Peninsular) Malaysia were included in our molecular analysis, to infer relationships within the species group. …”
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Dynamics of 5-carboxylcytosine during hepatic differentiation: potential general role for active demethylation by DNA repair in lineage specification by Lewis, Lara C., Lo, Peggy Cho Kiu, Foster, Jeremy M., Dai, Nan, Correa, Ivan R., Durczak, Paulina M., Duncan, Gary, Ramsawhook, Ashley, Aithal, Guruprasad P., Denning, Chris, Hannan, Nicholas R.F., Ruzov, Alexey

“…This suggests that oxidation of 5mC may represent a general mechanism of rearrangement of 5mC profiles during lineage specification of somatic cells in mammals.…”
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Amerindian mitochondrial DNAs have rare Asian mutations at high frequencies, suggesting they derived from four primary maternal lineages by Schurr, Theodore G., Ballinger, Scott W., Gan, Yik Yuen, Hodge, Judith A., Merriwether, David Andrew, Lawrence, Dale N., Knowler, William C., Weiss, Kenneth M., Wallace, Douglas C.

“…In addition, the Asian-specific deletion between the cytochrome c oxidase subunit II (COII) and tRNA(Lys) genes was also prevalent in both the Pima and the Maya. These data suggest that Amerindian mtDNAs derived from at least four primary maternal lineages, that new tribal-specific variants accumulated as these mtDNAs became distributed throughout the Americas, and that some genetic variation may have been lost when the progenitors of the Ticuna separated from the North and Central American populations.…”
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Multifunctional Properties of Chicken Embryonic Prenatal Mesenchymal Stem Cells- Pluripotency, Plasticity, and Tumor Suppression by Bhuvanalakshmi, G., Arfuso, Frank, Dharmarajan, Arunasalam, Warrier, Sudha

“…This is the first study characterizing prenatal chBMMSCs and their ability to not only differentiate into mesenchymal lineages but also into all the germ cell layer lineages. …”
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Round herring (genus Etrumeus) contain distinct evolutionary lineages coincident with a biogeographic barrier along Australia’s southern temperate coastline by Di Battista, J., Randall, J., Newman, Stephen, Bowen, B.

“…Results from morphological and mitochondrial DNA data reveal two evolutionary lineages corresponding to eastern and southwestern provinces (d = 0.007 for cytochrome c oxidase subunit I and d = 0.017 for cytochrome b), possibly initiated by the Bassian Isthmus between Australia and Tasmania during low sea-level stands. …”
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Yellow tails in the Red Sea: phylogeography of the Indo-Pacific goatfish Mulloidichthys flavolineatus reveals isolation in peripheral provinces and cryptic evolutionary lineages by Fernandez-Silva, I., Randall, J., Coleman, R., Di Battista, Joseph, Rocha, L., Reimer, J., Meyer, C., Bowen, B.

“…Methods: Specimens were obtained at 19 locations from the Red Sea to Hawai'i. Genetic data include mtDNA cytochrome b (n = 217) and 12 microsatellite loci (n = 185). …”
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Whole genome sequence analysis showing unique SARS-CoV-2 lineages of B.1.524 and AU.2 in Malaysia by Zainulabid, Ummu Afeera, Mat Yassim, Aini Syahida, Hussain, Mushtaq, Aslam, Ayesha, Soffian, Sharmeen Nellisa, Mohd Ibrahim, Mohamad Shafiq, Kamarudin, Norhidayah, Kamarulzaman, Mohd Nazli, Hin, How Soon, Ahmad, Hajar Fauzan

“…Despite considerable number of SARS-CoV-2 genome sequences have been submitted to GISAID and NCBI databases, there is still scarcity of data from Malaysia. This study aims to report new Malaysian lineages of the virus, responsible for the sustained spikes in COVID-19 cases during the third wave of the pandemic. …”
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Whole genome sequence analysis showing unique SARS-CoV-2 lineages of B.1.524 and AU.2 in Malaysia by Ummu Afeera, Zainulabid, Aini Syahida, Mat Yassim, Hussain, Mushtaq, Ayesha, Aslam, Sharmeen Nellisa, Soffian, Mohamad Shafiq, Mohd Ibrahim, Norhidayah, Kamarudin, Mohd Nazli, Kamarulzaman, Hin, How Soon, Hajar Fauzan, Ahmad

“…Despite considerable number of SARS-CoV-2 genome sequences have been submitted to GISAID and NCBI databases, there is still scarcity of data from Malaysia. This study aims to report new Malaysian lineages of the virus, responsible for the sustained spikes in COVID-19 cases during the third wave of the pandemic. …”
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Gelatin methacrylate hydrogel microparticle-based 3D platform for elasticity-driven multi-lineage differentation of human mesenchymal stem cells by Pappalardo, Francesco

“…With only matrix stiffness therefore as a differentiation stimulus, the differentiation of MSCs could be tuned based on the surface modulus of the microparticle: 0.2-1.5 kPa for neurogenic, ~6 kPa for adipogenic, ~18 kPa for myogenic, and ~44 kPa for osteogenic lineages in preliminary studies. These data have been confirmed through immunocytochemical methods by staining for relevant markers of differentiation. …”
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Ethnic lineage and religious transmission: The trajectories of ethnic boundary-making among Vietnamese Caodaists living in Cambodia by Thien, Huong Ninh

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Multipotent glia-like stem cells mediate stress adaptation by Rubin de Celis, Maria F., Garcia-Martin, Ruben, Wittig, Dierk, Valencia, Gabriela D., Enikolopov, Grigori, Funk, Richard H., Chavakis, Triantafyllos, Bornstein, Stefan R., Androutsellis-Theotokis, Andreas, Ehrhart-Bornstein, Monika

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Provenance Ontology Model for Land Administration Spatial Data Supply Chains by Sadiq, Muhammad, West, Geoff, McMeekin, David, Arnold, Lesley, Moncrieff, Simon

“…This in turn increases the usability of data. This paper explores methods to capture spatial data provenance and data flow lineage. …”
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Systematics of Malaysian woolly bats (Vespertilionidae: Kerivoula) inferred from mitochondrial, nuclear, karyotypic, and morphological data by Khan, Faisal Ali Anwarali, Solari, Sergio, Swier, Vicki J, Larsen, Peter A, Abdullah, M.T, Baker, Robert J

“…Examining species boundaries using data from multiple independent sources is an appropriate and robust method to identify genetically isolated evolutionary units. …”
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Partitional clustering algorithms for highly similar and sparseness Y-Short Tandem Repeat Data / Ali Seman by Seman, Ali

“…Meanwhile, Y-Short Tandem Repeats (Y-STR) is the tandem repeats on Y-Chromosome. The Y-STR data is now being utilized for distinguishing lineages and their relationships applied in many applications such as genetic genealogy, forensic genetic and anthropological genetic applications. …”
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