Search Results - "haplotype"

TNF block haplotypes associated with conserved MHC haplotypes in European, Asian and Australian Aboriginal donors by Valente, F., Tan, C., Phipps, M., Witt, C., Kaur, G., Gut, I., Allcock, R., Price, Patricia

“…We have defined TNF block haplotypes in Asian, European and Australian Aboriginal donors and shown conservation of TNF block haplotypes in geographically distinct populations, consistent with a common evolutionary origin. …”
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Human alpha defensin CNV haplotype diversity by Xu, Xiao

“…Additional to that, the haplotype diversity analysis highlighted an unusual haplotype 5T/7C which is only found in European populations but highly diverged from other human haplotypes. …”
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VKORC1 Haplotypes in patients treated with warfarin by Beshna, E, Teh , Lay Kek, Ngow, Harris Abdullah, Harun, Roslan, Salleh, Mohd Zaki

“…Objective: To determine the haplotypes frequencies of VKORC1 gene among the patients prescribed warfarin and to correlate the dose, INR and bleeding with haplotypes. …”
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Characterisation of TNF block haplotypes affecting the production of TNF and LTA by Tan, J., Temple, S., Kee, C., Waterer, G., Tan, C., Gut, I., Price, Patricia

“…The haplotypes were grouped into five families based on common alleles. …”
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Evolution of CCL3L1/CCL4L1 haplotypes by Janyakhantikul, Somwang

“…This study of the evolution of CCL3L 1/CCL4L 1 haplotypes showed that a major one-copy CCL3L 1/CCL4L I haplotype (about 70% haplotype frequency) identified in humans, represents the ancestral state, as inferred from comparison with chimpanzee.…”
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Eda haplotypes in three-spined stickleback are associated with variation in immune gene expression by Robertson, Shaun, Bradley, Janette E., MacColl, Andrew D.C.

“…We demonstrate an association between the Eda haplotype block and the expression pattern of key immune system genes. …”
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A revised nomenclature for ToxA haplotypes across multiple fungal species by Aboukhaddour, Reem, Hafez Abdel-Fattah, Mohamed, McDonald, Megan, Moffat, Caroline, Sudhir, Navathe, Friesen, Timothy, Strelkov, Stephen, Oliver, Richard, Tan, Kar-Chun, Liu, Zhaohui, Paula, Moolhuijzen, Phan, Huyen Phan, See, Pao Theen, Solomon, Peter

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Haplotype distribution among endangered asian elephants (Elephas maximus) in Peninsular Malaysia by Elliza, M.N., Shukor, M.N., Othman, N., Md-Zain, B.M.

“…In this study, 10 haplotypes (Hap01–Hap10) were detected in Peninsular Malaysian populations with a high haplotype diversity (Hˆ ) of 83%. …”
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The evolution and diversity of TNF block haplotypes in European, Asian and Australian aboriginal populations by Valente, F., Tan, C., Temple, S., Phipps, M., Witt, C., Kaur, G., Gut, I., McGinn, S., Allcock, R., Chew, C., Price, Patricia

“…Only six haplotypes have a unique tag single nucleotide polymorphism (SNP) valid for all populations, but seven haplotypes could be tagged with individual SNPs in selected populations. …”
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Prevalence and haplotypes of Toxoplasma gondii in native village chickens and pigs in Peninsular Malaysia by Leong, Sabrina Danial, Hassan, Latiffah, Sharma, Reuben Sunil Kumar, Toung, Ooi Peck, Musa, Hassan Ismail

“…A cross-sectional study was carried out to determine the prevalence of T. gondii infection, its associated risk factors in farms, and haplotypes isolated from the native village chicken and pig populations in Peninsular Malaysia. …”
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TNF haplotypes in a Southern African population resemble those seen in Caucasians and Asians by Chew, C., Wadley, A., Lombard, Z., Kamerman, P., Price, Patricia

“…Twenty haplotypes accounted for 91.8% of the cohort. The haplotypes matched those described previously in Caucasian and Asian populations, supporting the hypothesis that TNF block haplotypes are ancient and highly conserved. …”
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Haplotype analysis of β-Thalassaemia major and carriers with Filipino β°-deletion in Sabah, Malaysia by Teh, Lai Kuan, Elizabeth, George, Lai, Mei I., Wong, Lily, Ismail, Patimah

“…Polymerase chain reaction restriction fragment length polymorphism analysis (PCR-RFLP) was conducted on five markers within the β-globin gene cluster to construct the haplotype patterns.Results: Four haplotypes (Haplotype I–IV) were identified with Haplotype I as the predominant haplotype with the highest frequency of 0.98, followed by Haplotype II, III and Haplotype IV with 0.02. …”
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Molecular prevalence and haplotype diversity of tick-borne haemopathogens in shelter dogs in Peninsular Malaysia by Sipin, Quincie

“…However, the study revealed a higher haplotype and nucleotide diversities when using mitochondrial gene marker compared to nuclear gene marker, which will be useful in exploring variation in population of parasites. …”
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Haplotype analyses of Orang Asli population in Taman Negara Pahang using Y-STR markers by Sofia S. M. Y., Badrul Munir Md. Zain, Farida Z. M. Y.

“…The analyses conducted from the haplotype were gene diversity (GD), locus diversity (DL), haplotype diversity (HD) and discrimination capacity (DC). …”
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Mitochondrial DNA based phylogeny and haplotype networking of European honeybee Apis mellifera L. In Bangladesh by Jannatul Yeasmin Joaty, Md. Mamunur Rahman, Md. Ruhul Amin

“…The present study aims to reveal the genetic diversity, distribution pattern and haplotype networking of the available A. mellifera subspecies in Bangladesh. …”
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Shared phylogeographic patterns and widespread chloroplast haplotype sharing in Eucalyptus species with different ecological tolerances by Nevill, Paul, Després, T., Bayly, M., Bossinger, G., Ades, P.

“…Inter-specific sharing of haplotypes was extensive, and fixation of shared, regional haplotypes was more frequent in areas postulated as having been treeless at the LGM. …”
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African-American TOMM40'523-APOE haplotypes are admixture of West African and Caucasian alleles by Roses, A., Lutz, M., Saunders, A., Goldgaber, D., Saul, R., Sundseth, S., Akkari, Patrick, Roses, S., Gottschalk, W., Whitfield, K., Vostrov, A., Hauser, M., Allingham, R., Burns, D., Chiba-Falek, O., Welsh-Bohmer, K.

“…Results: African-American haplotype frequency scans of poly-T lengths connected in phase with either APOE e4 or APOE e3 differ from both West Africans and Caucasians and represent admixture of several distinct West African and Caucasian haplotypes. …”
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Conserved haplotype blocks within the sheep MHC and low SNP heterozygosity in the Class IIa subregion. by Lee, C., Qin, J., Munyard, Kylie, Subramaniam, N., Wetherall, John, Stear, M., Groth, David

“…Recombination within an extended sire haplotype was observed within the class II region for 4 of 20 sheep chromosomes, thereby supporting the presence of separated IIa and IIb subregions similar to those present in cattle. …”
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Tumour necrosis factor haplotypes associated with sensory neuropathy in Asian and Caucasian human immunodeficiency virus patients by Chew, C., Cherry, C., Imran, D., Yunihastuti, E., Kamarulzaman, A., Varna, S., Ismail, R., Phipps, M., Aghafar, Z., Gut, I., Price, Patricia

“…DNA samples were genotyped for polymorphisms in the central major histocompatibility complex (MHC) near TNF, and haplotypes were derived. The haplotype group FVa6,7,8 (incorporating TNF-1031) was found to be associated with neuropathy in Chinese patients in bivariate analyses (P = 0.03), and in Malays and Chinese in a multivariate analysis correcting for age and height (P = 0.02, P = 0.03, respectively). …”
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Inferring mechanisms of copy number change from haplotype structures at the human DEFA1A3 locus by Black, Holly A., Khan, Fayeza F., Tyson, Jess, Armour, John A.L.

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