Search Results - "Genomics

Sheep Genomics by Groth, David

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Functional genomics of rice by Ho, Chai Ling

“…Rice functional genomic research at the post-genomic era has been accelerated by the developmental of technical and resource platforms, focusing on construction of mutant libraries, isolation of full-length cDNAs, global gene expression, data mining and rice bioinformatics. …”
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Comparative genomics reveals insights into avian genome evolution and adaptation by Zhang, G., Li, C., Li, Q., Li, B., Larkin, D., Lee, C., Storz, J., Antunes, A., Greenwold, M., Meredith, R., Odeen, A., Cui, J., Zhou, Q., Xu, L., Pan, H., Wang, Z., Jin, L., Zhang, P., Hu, H., Yang, W., Hu, J., Xiao, J., Yang, Z., Liu, Yang, Xie, Q., Yu, H., Lian, J., Wen, P., Zhang, F., Li, H., Zeng, Y., Xiong, Z., Liu, S., Zhou, L., Huang, Z., An, N., Wang, J., Zheng, Q., Xiong, Y., Wang, G., Wang, B., Wang, J., Fan, Y., da Fonseca, R., Alfaro-Nunez, A., Schubert, M., Orlando, L., Mourier, T., Howard, J., Ganapathy, G., Pfenning, A., Whitney, O., Rivas, M., Hara, E., Smith, J., Farre, M., Narayan, J., Slavov, G., Romanov, M., Borges, R., Machado, J.P., Khan, I., Springer, M., Gatesy, J., Hoffmann, F., Opazo, J., Hastad, O., Sawyer, R., Kim, H., Kim, K., Kim, H.J., Cho, S., Li, N., Huang, Y., Bruford, M., Zhan, X., Dixon, A., Bertelsen, M., Derryberry, E., Warren, W., Wilson, R., Li, S., Ray, D., Green, R., O'Brien, S., Griffin, D., Johnson, W., Haussler, D., Ryder, O., Willerslev, E., Graves, G., Alstrom, P., Fjeldsa, J., Mindell, D., Edwards, S., Braun, E., Rahbek, C., Burt, D., Houde, P., Zhang, Y., Yang, H., Wang, J., Bunce, Michael, Jarvis, E., Gilbert, Thomas, Wang, J.

“…We explored bird macroevolution using full genomes from 48 avian species representing all major extant clades. …”
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Genome-wide analysis for genomic alteration in acute promyelocytic leukaemia by Hassan, Rosline

“…In this study, we performed CNV analysis, FL T3 mutation analysis, miRNA expression profiling and gene expression-pathway based analysis to understand the underlying mechanism of genomic alteration involve in contributing to the different survival in subgroups of acute promyelocytic leukaemia patients. …”
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Genomics: Plant Genetic Improvement by Diepeveen, Dean, Webster, H., Appels, R.

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Australia: Public Health Genomics by Metcalfe, S., Bittles, A., O'Leary, Peter, Emery, J.

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Applications of Genomics in Plant Biology by Bourgault, R., Zulak, Katherine, Facchini, P.

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Pan-parastagonospora comparative genome analysis-effector prediction and genome evolution by Syme, Robert, Tan, Kar-Chun, Rybak, Katarzyna, Friesen, T., McDonald, B., Oliver, Richard, Hane, James

“…We report a fungal pan-genome study involving Parastagonospora spp., including 21 isolates of the wheat (Triticum aestivum) pathogen Parastagonospora nodorum, 10 of the grass-infecting Parastagonospora avenae, and 2 of a closely related undefined sister species. …”
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Genetic resources, genome mapping and evolutionary genomics of the pig (Sus scrofa) by Chen, Kefei, Baxter, T., Muir, W., Groenen, M., Schook, L.

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Closing the genomic gaps of rat cytomegalovirus ALL-03 in genome scaffold by Balakrishnan, Krishnan Nair

“…Thus, completing the genome sequence by closing all the gaps in draft genome and verify the position and function of all Open Reading Frame (ORF) can aid in future study for antiviral drug and vaccine development. …”
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Development and Analyses of Expressed Sequence Tags from Gracilaria Changii for Functional Genomic Studies by Teo, Swee Sen

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Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome by Pedersen, J., Valen, E., Velazquez, A., Parker, B., Rasmussen, M., Lindgreen, S., Lilje, B., Tobin, D., Kelly, T., Vang, S., Andersson, R., Jones, P., Hoover, C., Tikhonov, A., Prokhortchouk, E., Rubin, E., Sandelin, A., Gilbert, Thomas, Krogh, A., Willerslev, E., Orlando, L.

“…Using the genome sequence data generated from hair shafts of a four thousand year old Palaeo-Eskimo belonging to the Saqqaq culture, we generate the first ancient nucleosome map coupled with a genome-wide survey of cytosine methylation levels. …”
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The genome sequence of the biocontrol fungus Metarhizium anisopliae and comparative genomics of Metarhizium species. by Pattemore, J., Hane, James, Williams, Angela, Wilson, B., Stodart, B., Ash, G.

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Comparative genomics of bacteriophage of the genus Seuratvirus by Sazinas, Pavelas, Redgwell, Tamsin, Rihtman, Branko, Grigonyte, Aurelija, Michniewski, Slawomir, Scanlan, David J., Hobman, Jon L., Millard, Andrew

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Comparative Genomics of Parastagonospora and Pyrenophora species by Syme, Robert Andrew

“…The comparisons have yielded insight into the evolutionary history of pathogen and host, insights into the mechanisms of genome evolution, and prediction of genes integral to fungal pathogenicity.…”
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The Social Determinants of Health in the Age of Genomics by Binns, Colin, Low, W.

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Plasmodium knowlesi Genome Sequences from Clinical Isolates Reveal Extensive Genomic Dimorphism by Miguel M., Pinheiro, Md Atique, Ahmed, Scott B., Millar, Theo, Sanderson, Thomas, D. Otto, Woon, Chan Lu, Sanjeev, Krishna, Julian C., Rayner, Janet, Cox-Singh

“…Seven of fifteen samples processed had sufficiently pure P. knowlesi DNA for whole genome sequencing. The reads were mapped to the P. knowlesi H strain reference genome and an average mapping of 90% was obtained. …”
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Comparing yeast genome assemblies by Siow, Cheuk Chuen

“…The LiftOver utility in the UCSC Genome Browser handles these tasks with ease. Unfortunately, the choice for yeast genome conversions is limited. …”
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Mathematical modeling of genome replication by Retkute, Renata, Nieduszynski, Conrad A., Moura, Alessandro de

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Wheat landrace genome diversity by Wingen, Luzie U., West, Claire, Leverington-Waite, Michelle, Collier, Sarah, Orford, Simon, Goram, Richard, Yang, Cai-yun, King, Julie, Allen, Alexandra M., Burridge, Amanda, Edwards, Keith J., Griffiths, Simon

“…Understanding the genomic complexity of bread wheat (Triticum aestivum L.) is a cornerstone in the quest to unravel the processes of domestication and the following adaptation of domesticated wheat to a wide variety of environments across the globe. …”
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