Utilizing shared interacting domain patterns and Gene Ontology information to improve protein-protein interaction prediction

QR Code

Utilizing shared interacting domain patterns and Gene Ontology information to improve protein-protein interaction prediction

Protein-protein interactions (PPIs) play a significant role in many crucial cellular operations such as metabolism, signaling and regulations. The computational methods for predicting PPIs have shown tremendous growth in recent years, but problem such as huge false positive rates has contributed to...

Full description

Bibliographic Details
Main Authors:	Roslan, Rosfuzah, M. Othman, Razib, A. Shah, Zuraini, Kasim, Shahreen, Asmuni, Hishammuddin, Talib, Jumail, Hassan, Rohayanti, Zakaria, Zalmiyah
Format:	Article
Language:	English
Published:	Elsevier 2010
Subjects:	T Technology (General)
Online Access:	http://eprints.uthm.edu.my/7880/ http://eprints.uthm.edu.my/7880/1/J7534_a3be278a77226cd722c59986e8c53d51.pdf

Similar Items

Utilizing shared interacting domain patterns and gene ontology information to improve protein–protein interaction prediction
by: Roslan, Rosfuzah, et al.
Published: (2010)

An optimal mesh algorithm for remote protein homology detection
by: M. Abdullah, Firdaus, et al.
Published: (2011)

Support vector machines for predicting protein-protein interactions using domains and hydrophobicity features
by: Alashwal, Hany Taher Ahmed, et al.
Published: (2006)

Comparison of domain and hydrophobicity features for the prediction of protein-protein interactions using support vector machines
by: Alashwal, Hany, et al.
Published: (2007)

Predicting protein-protein interactions as a one-class classification problem
by: Alashwal, Hany, et al.
Published: (2006)

Contact lens classification by using segmented lens boundary features
by: Mohd Zin, Nur Ariffin, et al.
Published: (2018)

Genetic algorithms for gene ontology - based protein sequence annotation
by: Othman, Muhamad Razib
Published: (2007)

One-Class Classifier to Predict Protein-Protein Interactions based on Hydrophobibity Properties
by: Alashwal, Hany Taher Ahmed, et al.
Published: (2006)

Predicting proteins interactions from protein sequence features using support vector machines
by: Alashwal, Hany Taher Ahmed, et al.
Published: (2017)

The development of machine learning based software for predicting protein-protein interactions and protein function from protein primary structure
by: Othman, Muhamad Razib, et al.
Published: (2007)

Protein ontology
by: Sidhu, Amandeep, et al.
Published: (2007)

Protein Kinase C-Delta C2 Domain Interactions in Breast Cancer
by: Khader, Rasha
Published: (2023)

Protein ontology: Vocabulary for protein data
by: Chang, Elizabeth, et al.
Published: (2005)

Macrocyclic peptides as inhibitors of protein-protein interactions
by: Smith, Frances
Published: (2020)

Characterisation of essential proteins in proteins interaction networks
by: Sakhinah Abu Bakar,, et al.
Published: (2013)

Optimization of protein-protein docking for predicting Fc-protein interactions
by: Agostino, Mark, et al.
Published: (2016)

The protein ontology project: Structured vocabularies for proteins
by: Chang, Elizabeth, et al.
Published: (2005)

Protein-protein interactions during Japanese encephalitis infection
by: Magdline Sia, Henry Sum.
Published: (2007)

The Structure of Glycosaminoglycans and their Interactions with Proteins
by: Gandhi, Neha, et al.
Published: (2008)

Identification of Phosphoprotien : Phosphoprotien and Phosphoprotien : Nucleocapsid Protein Interaction Domains of New Castle Disease Virus
by: Jahanshiri, Fatemeh, et al.
Published: (2004)

Inhibiting protein–protein interactions in telomeres as an approach to cancer chemotherapy
by: Salih, Twana
Published: (2016)

Deployment of protein ontology framework
by: Sidhu, Amandeep, et al.
Published: (2007)

Deployment of protein ontology framework
by: Sidhu, Amandeep, et al.
Published: (2007)

An Ontology for Protein Data Models
by: Sidhu, Amandeep, et al.
Published: (2005)

Accomplishments and challenges of protein ontology
by: Sidhu, Amandeep, et al.
Published: (2006)

Advances in protein ontology project
by: Sidhu, Amandeep, et al.
Published: (2006)

Protein ontology instance store
by: Sidhu, Amandeep, et al.
Published: (2007)

Protein Ontology Project: 2007
by: Sidhu, Amandeep, et al.
Published: (2007)

Carbene footprinting accurately maps binding sites in protein–ligand and protein–protein interactions
by: Manzi, Lucio, et al.
Published: (2016)

A study on component-based technology for development of complex bioinformatics software
by: Ali Shah, Zuraini, et al.
Published: (2004)

Protein-Hydrocolloids Interactions in "Keropok Lekor"
by: Kaw, Zay Ya
Published: (2004)

Engineering trustworthy ontologies: case study of protein ontology
by: Hussain, Farookh Khadeer, et al.
Published: (2006)

One-class support vector machines for protein-protein interactions prediction
by: Alashwal, H., et al.
Published: (2006)

Data integration through protein ontology
by: Sidhu, Amandeep, et al.
Published: (2007)

Protein ontology development using OWL
by: Sidhu, Amandeep, et al.
Published: (2005)

Protein Ontology Project: 2006 updates
by: Sidhu, Amandeep, et al.
Published: (2006)

Ontological foundation for protein data models
by: Dillon, Tharam S., et al.
Published: (2005)

Creating a protein ontology resource
by: Chang, Elizabeth, et al.
Published: (2005)

Protein Data Integration through Ontologies
by: Sidhu, Amandeep
Published: (2009)

Small molecule inhibitors of the p53-MDM2 protein-protein interaction
by: Fitzgerald, Ross Patrick
Published: (2011)