The complete chloroplast genome of Walla Patta, Gyrinops walla Thymelaeaceae, an agarwood-producing tree species from Sri Lanka
Gyrinops walla is an important agarwood-producing tree and threatened species from Sri Lanka. Herein, we assembled and characterized the complete chloroplast (cp) genome of G. walla as a genomic resource for conservation purposes. The 175,130 bp long genome is comprised of 87,376 bp large single-cop...
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| Format: | Article |
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Taylor & Francis
2021
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| Online Access: | http://psasir.upm.edu.my/id/eprint/95354/ |
| _version_ | 1848862137220333568 |
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| author | Chen, Jingrui Lee, Shiou Yih Munugoda, K. D. Mohamed, Rozi Subasinghe, S. M. C. U. P. Liao, Wenbo |
| author_facet | Chen, Jingrui Lee, Shiou Yih Munugoda, K. D. Mohamed, Rozi Subasinghe, S. M. C. U. P. Liao, Wenbo |
| author_sort | Chen, Jingrui |
| building | UPM Institutional Repository |
| collection | Online Access |
| description | Gyrinops walla is an important agarwood-producing tree and threatened species from Sri Lanka. Herein, we assembled and characterized the complete chloroplast (cp) genome of G. walla as a genomic resource for conservation purposes. The 175,130 bp long genome is comprised of 87,376 bp large single-copy (LSC) and 3316 bp small single-copy (SSC) regions, which are separated by two inverted repeat (IR) region, each with a size of 42,291 bp. A total of 140 genes were predicted for the cp genome, which includes 94 protein-coding, 38 tRNA, and eight rRNA genes. Phylogenetic analysis showed that G. walla is fully resolved in a sister position to Aquilaria in the family Thymelaeaceae. The data provided will be useful for study on the molecular phylogenetics and evolution of Thymelaeaceae in the future. |
| first_indexed | 2025-11-15T13:12:14Z |
| format | Article |
| id | upm-95354 |
| institution | Universiti Putra Malaysia |
| institution_category | Local University |
| last_indexed | 2025-11-15T13:12:14Z |
| publishDate | 2021 |
| publisher | Taylor & Francis |
| recordtype | eprints |
| repository_type | Digital Repository |
| spelling | upm-953542023-01-31T08:50:27Z http://psasir.upm.edu.my/id/eprint/95354/ The complete chloroplast genome of Walla Patta, Gyrinops walla Thymelaeaceae, an agarwood-producing tree species from Sri Lanka Chen, Jingrui Lee, Shiou Yih Munugoda, K. D. Mohamed, Rozi Subasinghe, S. M. C. U. P. Liao, Wenbo Gyrinops walla is an important agarwood-producing tree and threatened species from Sri Lanka. Herein, we assembled and characterized the complete chloroplast (cp) genome of G. walla as a genomic resource for conservation purposes. The 175,130 bp long genome is comprised of 87,376 bp large single-copy (LSC) and 3316 bp small single-copy (SSC) regions, which are separated by two inverted repeat (IR) region, each with a size of 42,291 bp. A total of 140 genes were predicted for the cp genome, which includes 94 protein-coding, 38 tRNA, and eight rRNA genes. Phylogenetic analysis showed that G. walla is fully resolved in a sister position to Aquilaria in the family Thymelaeaceae. The data provided will be useful for study on the molecular phylogenetics and evolution of Thymelaeaceae in the future. Taylor & Francis 2021-05-19 Article PeerReviewed Chen, Jingrui and Lee, Shiou Yih and Munugoda, K. D. and Mohamed, Rozi and Subasinghe, S. M. C. U. P. and Liao, Wenbo (2021) The complete chloroplast genome of Walla Patta, Gyrinops walla Thymelaeaceae, an agarwood-producing tree species from Sri Lanka. Mitochondrial DNA Part B-Resources, 6 (6). 1699 - 1701. ISSN 2380-2359 https://www.tandfonline.com/doi/full/10.1080/23802359.2021.1926362 10.1080/23802359.2021.1926362 |
| spellingShingle | Chen, Jingrui Lee, Shiou Yih Munugoda, K. D. Mohamed, Rozi Subasinghe, S. M. C. U. P. Liao, Wenbo The complete chloroplast genome of Walla Patta, Gyrinops walla Thymelaeaceae, an agarwood-producing tree species from Sri Lanka |
| title | The complete chloroplast genome of Walla Patta, Gyrinops walla Thymelaeaceae, an agarwood-producing tree species from Sri Lanka |
| title_full | The complete chloroplast genome of Walla Patta, Gyrinops walla Thymelaeaceae, an agarwood-producing tree species from Sri Lanka |
| title_fullStr | The complete chloroplast genome of Walla Patta, Gyrinops walla Thymelaeaceae, an agarwood-producing tree species from Sri Lanka |
| title_full_unstemmed | The complete chloroplast genome of Walla Patta, Gyrinops walla Thymelaeaceae, an agarwood-producing tree species from Sri Lanka |
| title_short | The complete chloroplast genome of Walla Patta, Gyrinops walla Thymelaeaceae, an agarwood-producing tree species from Sri Lanka |
| title_sort | complete chloroplast genome of walla patta, gyrinops walla thymelaeaceae, an agarwood-producing tree species from sri lanka |
| url | http://psasir.upm.edu.my/id/eprint/95354/ http://psasir.upm.edu.my/id/eprint/95354/ http://psasir.upm.edu.my/id/eprint/95354/ |