Phylogenetic Relationships of Trichoderma harzianum Based on the Sequence Analysis of the Internal Transcribed Spacer Region -1 of the rDNA
The goal of this study is to determine whether sequence analysis of internal transcribed spacer-1 region of the rDNA can be used to detect species level of Trichoderma harzianum. Internal transcribed spacer- 1 region (ITS 1) of the ribosomal DNA was amplified by polymerase chain reaction (PCR). To t...
| Main Authors: | Siddiquee, Shafiquzzaman, Abdullah, Faridah, Tan, Soon Guan, Aziz, Emila Rohaza |
|---|---|
| Format: | Article |
| Language: | English English |
| Published: |
INSInet Publications
2007
|
| Online Access: | http://psasir.upm.edu.my/id/eprint/7340/ http://psasir.upm.edu.my/id/eprint/7340/1/16.pdf |
Similar Items
Level in Allozyme Variations of Malaysian Isolates of Trichoderma harzianum and its Taxonomic Implications
by: Siddiquee, Shafiquzzaman, et al.
Published: (2007)
by: Siddiquee, Shafiquzzaman, et al.
Published: (2007)
Analysis of internal transcribed spacer (ITS) regions + 5.8S gene of rDNA of Ganoderma isolates from infected oil palm and coconut stumps
by: Ho, Yin Wan, et al.
by: Ho, Yin Wan, et al.
Electrochemical DNA biosensor for the detection of trichoderma harzianum.
by: Yusof, Nor Azah, et al.
Published: (2010)
by: Yusof, Nor Azah, et al.
Published: (2010)
Allozyme variations of Trichoderma harzianum and its taxonomic implications
by: Siddiquee, Md. Shafiquzzaman, et al.
Published: (2007)
by: Siddiquee, Md. Shafiquzzaman, et al.
Published: (2007)
Differentiation of oral candidal species based on the internally transcribed spacer (ITS) regions of rDNA / Raja Ahmad Zahir Raja Halinuddin
by: Raja Halinuddin, Raja Ahmad Zahir
Published: (2012)
by: Raja Halinuddin, Raja Ahmad Zahir
Published: (2012)
Identification of Fungal Communities in "Agarwood' from wild Aquilaria malaccensis using rDNA Spacer Sequences
by: Mohamed, Rozi, et al.
Published: (2009)
by: Mohamed, Rozi, et al.
Published: (2009)
The Genetic Relationship between Three Trichoderma Species and Inhibitory Effects of T. Harzianum (Rifai) On Ganoderma Boninense
by: Siddiquee, Md. Shafiquzzaman
Published: (2007)
by: Siddiquee, Md. Shafiquzzaman
Published: (2007)
Electrochemical DNA biosensor for the detection of specific gene related to Trichoderma harzianum species.
by: Siddiquee, Shafiquzzaman, et al.
Published: (2010)
by: Siddiquee, Shafiquzzaman, et al.
Published: (2010)
DNA hybridization based on Trichoderma harzianum gene probe immobilization on self-assembled monolayers on a modified gold electrode.
by: Siddiquee, Shafiquzzaman, et al.
Published: (2010)
by: Siddiquee, Shafiquzzaman, et al.
Published: (2010)
Molecular and phylogenetic identification of marine microalgae inferred by 18S rDNA gene
by: Nazia Abdul Kadar,, et al.
Published: (2018)
by: Nazia Abdul Kadar,, et al.
Published: (2018)
Invitro studies on the potential Trichoderma harzianum for antaganostic properties against Ganoderma boninnese.
by: Siddiquee, Shafiquzzaman, et al.
Published: (2009)
by: Siddiquee, Shafiquzzaman, et al.
Published: (2009)
Utilization of the internal transcribed spacer (ITS) DNA sequence to trace the geographical sources of Aquilaria malaccensis Lam. populations
by: Lee, Shiou Yih, et al.
Published: (2018)
by: Lee, Shiou Yih, et al.
Published: (2018)
Identification and phylogenetic inference in different mollucs nudibranch species via mitochondrial 16S rDNA
by: Alqudah, Ali, et al.
Published: (2015)
by: Alqudah, Ali, et al.
Published: (2015)
Phylogenetic relationship among selected species of bulbul (Family : pycnonotidae) based on 16S rDNA
by: Mohamad, bin Kombi @ Kohdi
Published: (2004)
by: Mohamad, bin Kombi @ Kohdi
Published: (2004)
Phylogenetic relationships of the orchid genus Coelogyne in Peninsular Malaysia inferred from morphological characteristics and Internal Transcribed Spacer (ITS) sequence data
by: Yoh, Kok-Hon, et al.
Published: (2022)
by: Yoh, Kok-Hon, et al.
Published: (2022)
In vitro and in vivo biocontrol performance of Trichoderma harzianum Rifai on Ganoderma boninense Pat. related to pathogenicity on oil palm (Elaeis guineensis Jacq.)
by: Naher, Laila, et al.
Published: (2014)
by: Naher, Laila, et al.
Published: (2014)
Novel bacteriocinogenic Lactobacillus plantarum strains and their differentiation by sequence analysis of 16S rDNA, 16S-23S and 23S-5S intergenic spacer regions and randomly amplified polymorphic DNA
by: Moghadam, Morteza Shojaei, et al.
Published: (2010)
by: Moghadam, Morteza Shojaei, et al.
Published: (2010)
Monophyly of four sections of genus Dendrobium (orchidaceae): evidence from nuclear ribosomal DNA intrenal transcribed spacer (ITS) sequences
by: Moudi, Maryam, et al.
Published: (2015)
by: Moudi, Maryam, et al.
Published: (2015)
Electrochemical DNA biosensor for the detection of trichoderma harzianum based on agold electrode modified with a composite membrane made from an ionic liquid, ZnO nanoparticles and chitosan, and by using acridine orange as a redox indicator.
by: Siddiquee, Shafiquzzaman, et al.
Published: (2011)
by: Siddiquee, Shafiquzzaman, et al.
Published: (2011)
Phylogenetic relationships of the orchid genus coelogyne in peninsular Malaysia inferred from morphological characteristics and Internal Transcribed Spacer (ITS)
by: Yoh, Kok-Hon, et al.
Published: (2022)
by: Yoh, Kok-Hon, et al.
Published: (2022)
18S rDNA phylogeny of Pseudo-nitzschia (Bacillariophyceae) inferred from sequence-structure information
by: Lim, H.C., et al.
Published: (2016)
by: Lim, H.C., et al.
Published: (2016)
Characterization of 16S rRNA and internal transcribed spacer (ITS) region gene sequencing of the Aeromonas species isolated from cultured freshwater fishes
by: Khairul Parman, Diyana Nadhirah
Published: (2013)
by: Khairul Parman, Diyana Nadhirah
Published: (2013)
Co-infection of Haemonchus contortus and Trichostrongylus spp. among livestock in Malaysia as revealed by amplification and sequencing of the internal transcribed spacer II DNA region
by: Tan, Tiong Kai, et al.
Published: (2014)
by: Tan, Tiong Kai, et al.
Published: (2014)
Assessment of Avicennia species using leaf morphology and nuclear ribosomal internal transcribed spacer DNA barcode
by: Syazana, Jeffry, et al.
Published: (2025)
by: Syazana, Jeffry, et al.
Published: (2025)
Sources for sedimentary bacteriohopanepolyols as revealed by 16S rDNA stratigraphy
by: Coolen, Marco, et al.
Published: (2008)
by: Coolen, Marco, et al.
Published: (2008)
Isoenzyme analysis and relationships among three species in Malaysian Trichoderma isolates.
by: Shafiquzzaman, Siddiquee, et al.
Published: (2010)
by: Shafiquzzaman, Siddiquee, et al.
Published: (2010)
Characterisation of Metagenomic Bougainvillea Soil DNA Through rDNA PCR Amplification
by: Ganesan, Aruna
Published: (2017)
by: Ganesan, Aruna
Published: (2017)
Biocontrol agent Trichoderma harzianum strain FA 1132 as an enhancer of oil palm growth
by: Naher, Laila, et al.
Published: (2012)
by: Naher, Laila, et al.
Published: (2012)
Biocontrol agent Trichoderma harzianum strain FA 1132 as an enhancer of oil palm growth
by: Naher, Laila, et al.
Published: (2012)
by: Naher, Laila, et al.
Published: (2012)
The phylogeny of the tomato leaf mould fungus, Cladosporium fulvum syn. Fulvia fulva by analysis of rDNA sequences
by: Curtis, M., et al.
Published: (1994)
by: Curtis, M., et al.
Published: (1994)
Polymorphic analysis of field collected Aedes Albopictus from Subang Murni, Shah Alam using Internal Transcribed Spacer 2 (Its2) Rdna Marker / Nadiah Mohd Nawawi
by: Mohd Nawawi, Nadiah
Published: (2015)
by: Mohd Nawawi, Nadiah
Published: (2015)
Pseudo‑nitzschia species (Bacillariophyceae) identification
and delineation using mitochondrial cox1 gene sequences
as compared to LSU rDNA
by: Sing, Tung Teng
Published: (2015)
by: Sing, Tung Teng
Published: (2015)
Pseudo-nitzschia species (Bacillariophyceae) identification and delineation using mitochondrial cox1 gene sequences as compared to LSU rDNA
by: Suh, Nih Tan, et al.
Published: (2015)
by: Suh, Nih Tan, et al.
Published: (2015)
Disease suppression in Ganoderma-infected oil palm seedlings treated with Trichoderma harzianum
by: Mohd Zainudin, Nur Ain Izzati, et al.
Published: (2008)
by: Mohd Zainudin, Nur Ain Izzati, et al.
Published: (2008)
Molecular characterization of 16S rRNA and internal transcribed spacer (ITS) regions of Aeromonas spp. isolated from cultured freshwater fishes in Malaysia
by: K.P., Diyana Nadhirah, et al.
Published: (2016)
by: K.P., Diyana Nadhirah, et al.
Published: (2016)
Species identification of potential probiotic lactic acid bacteria isolated from Malaysian fermented food based on 16S ribosomal RNA (16S rRNA) and internal transcribed spacer (ITS) sequences
by: Yaacob Ilyanie,, et al.
Published: (2023)
by: Yaacob Ilyanie,, et al.
Published: (2023)
Enhancement of biocontrol activities of Trichoderma harzianum through protoplast fusion
by: Meon, Sariah
Published: (1999)
by: Meon, Sariah
Published: (1999)
Potential of Trichoderma harzianum as cellulose biodegrade in biocomposting of paddy straw
by: Yaacob, Siti Zalina, et al.
Published: (2017)
by: Yaacob, Siti Zalina, et al.
Published: (2017)
DNA barcoding: bioinformatics and phylogenetic workflow in R
by: Kanthaswamy, Sree, et al.
Published: (2025)
by: Kanthaswamy, Sree, et al.
Published: (2025)
A simple 18S rDNA approach for the identification of cultured eukaryotic microalgae with an emphasis on primers
by: Khaw, Yam Sim, et al.
Published: (2020)
by: Khaw, Yam Sim, et al.
Published: (2020)
Similar Items
-
Level in Allozyme Variations of Malaysian Isolates of Trichoderma harzianum and its Taxonomic Implications
by: Siddiquee, Shafiquzzaman, et al.
Published: (2007) -
Analysis of internal transcribed spacer (ITS) regions + 5.8S gene of rDNA of Ganoderma isolates from infected oil palm and coconut stumps
by: Ho, Yin Wan, et al. -
Electrochemical DNA biosensor for the detection of trichoderma harzianum.
by: Yusof, Nor Azah, et al.
Published: (2010) -
Allozyme variations of Trichoderma harzianum and its taxonomic implications
by: Siddiquee, Md. Shafiquzzaman, et al.
Published: (2007) -
Differentiation of oral candidal species based on the internally transcribed spacer (ITS) regions of rDNA / Raja Ahmad Zahir Raja Halinuddin
by: Raja Halinuddin, Raja Ahmad Zahir
Published: (2012)