Extraction, purification and characterization of polygalacturonase from durian (Durio zibethinus L.) seed
Polygalacturonase breaks down pectin chains generally found in the cell wall of plant. Primarily, enzymes have high tendency to be degraded by improper extraction method. Therefore, it is essential to use an economical, simple and efficient extraction method. In this study, polygalacturonase (...
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| Format: | Thesis |
| Language: | English |
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2017
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| Online Access: | http://psasir.upm.edu.my/id/eprint/68881/ http://psasir.upm.edu.my/id/eprint/68881/7/FSTM%202018%2011%20IR%20edit.pdf |
| _version_ | 1848867628583485440 |
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| author | Asmadi, Farhana Azmira |
| author_facet | Asmadi, Farhana Azmira |
| author_sort | Asmadi, Farhana Azmira |
| building | UPM Institutional Repository |
| collection | Online Access |
| description | Polygalacturonase breaks down pectin chains generally found in the cell wall of plant.
Primarily, enzymes have high tendency to be degraded by improper extraction
method. Therefore, it is essential to use an economical, simple and efficient extraction
method. In this study, polygalacturonase (PG) was extracted from durian seed with
ultrasound assisted-extraction. The effects of extraction time, ultrasound temperature,
pH of buffer and solvent-to-seed ratio for optimization of the extraction were
determined. The optimum combination of extraction was achieved at 30 min
extraction time, 50°C temperature and 5:1 ml/g of solvent-to-seed ratio at pH 5.5.
Conventional purification processes are multistep, tedious and expensive; thus, it is
vital to develop an economical, highly efficient and environmental friendly process
for the purification of polygalacturonase with required properties. A novel aqueous
two-phase system (ATPS) process composed of surfactant and acetonitrile was
employed to purify polygalacturonase from Durio zibethinus seed at laboratory scale.
In this study, the effect of Tie Line Length (TLL), crude loads and pH on purification
of the enzyme were investigated. The results of the ATPS process indicated
polygalacturonase was partitioned in the novel method of ATPS composed of 23%
(w/w) Triton X-100 and 19% (w/w) acetonitrile, at 55.6% of TLL (tie line length)
crude load of 25% (w/w) at pH 6.0. It was determined that the phase components, Tie
Line Length (TLL), crude loads and pH effected the polygalacturonase partitioning.
This study also showed that ATPS can be used as an economical and effective method
for purification of the enzyme from a novel source with potential industrial application
and alternative to the conventional ATPS.
Characterization of the purified polygalacturonase was done to determine the
polygalacturonase stability in vary conditions. In this study, it indicated that
polygalacturonase extracted from durian seed was stable with the presence of some metal ions, surfactants and oxidizing agents. The metals K+, Mg2+, Na+ and Cu2+
enhanced the polygalacturonase activity to 135.1%, 108.5%, 94.6% and 86.7%
respectively. Meanwhile Zn2+, Ca2+ and Fe3+ inhibited the enzyme activity to 72.9%,
49.3% and 14.1% respectively. Polygalacturonase showed high stability towards
surfactants EDTA (108.1%) and SDS (101.6%). The polygalacturonase was stable in
Triton X-100 (97.7%) and Tween 80 (92.5%) meanwhile almost half of the activity
was inhibited by oxidizing agent to 66.7%. Based on SDS-PAGE, the estimated
molecular weight of this was 34.4 kDa. Hence, as a conclusion, the enzyme with
unique characteristics could be extracted and purified from natural source. It has high
potential to contribute in some industrial applications such as food and beverages,
textile, paper, and other biotechnological applications. |
| first_indexed | 2025-11-15T11:38:42Z |
| format | Thesis |
| id | upm-68881 |
| institution | Universiti Putra Malaysia |
| institution_category | Local University |
| language | English |
| last_indexed | 2025-11-15T14:39:31Z |
| publishDate | 2017 |
| recordtype | eprints |
| repository_type | Digital Repository |
| spelling | upm-688812025-09-26T08:24:11Z http://psasir.upm.edu.my/id/eprint/68881/ Extraction, purification and characterization of polygalacturonase from durian (Durio zibethinus L.) seed Asmadi, Farhana Azmira Polygalacturonase breaks down pectin chains generally found in the cell wall of plant. Primarily, enzymes have high tendency to be degraded by improper extraction method. Therefore, it is essential to use an economical, simple and efficient extraction method. In this study, polygalacturonase (PG) was extracted from durian seed with ultrasound assisted-extraction. The effects of extraction time, ultrasound temperature, pH of buffer and solvent-to-seed ratio for optimization of the extraction were determined. The optimum combination of extraction was achieved at 30 min extraction time, 50°C temperature and 5:1 ml/g of solvent-to-seed ratio at pH 5.5. Conventional purification processes are multistep, tedious and expensive; thus, it is vital to develop an economical, highly efficient and environmental friendly process for the purification of polygalacturonase with required properties. A novel aqueous two-phase system (ATPS) process composed of surfactant and acetonitrile was employed to purify polygalacturonase from Durio zibethinus seed at laboratory scale. In this study, the effect of Tie Line Length (TLL), crude loads and pH on purification of the enzyme were investigated. The results of the ATPS process indicated polygalacturonase was partitioned in the novel method of ATPS composed of 23% (w/w) Triton X-100 and 19% (w/w) acetonitrile, at 55.6% of TLL (tie line length) crude load of 25% (w/w) at pH 6.0. It was determined that the phase components, Tie Line Length (TLL), crude loads and pH effected the polygalacturonase partitioning. This study also showed that ATPS can be used as an economical and effective method for purification of the enzyme from a novel source with potential industrial application and alternative to the conventional ATPS. Characterization of the purified polygalacturonase was done to determine the polygalacturonase stability in vary conditions. In this study, it indicated that polygalacturonase extracted from durian seed was stable with the presence of some metal ions, surfactants and oxidizing agents. The metals K+, Mg2+, Na+ and Cu2+ enhanced the polygalacturonase activity to 135.1%, 108.5%, 94.6% and 86.7% respectively. Meanwhile Zn2+, Ca2+ and Fe3+ inhibited the enzyme activity to 72.9%, 49.3% and 14.1% respectively. Polygalacturonase showed high stability towards surfactants EDTA (108.1%) and SDS (101.6%). The polygalacturonase was stable in Triton X-100 (97.7%) and Tween 80 (92.5%) meanwhile almost half of the activity was inhibited by oxidizing agent to 66.7%. Based on SDS-PAGE, the estimated molecular weight of this was 34.4 kDa. Hence, as a conclusion, the enzyme with unique characteristics could be extracted and purified from natural source. It has high potential to contribute in some industrial applications such as food and beverages, textile, paper, and other biotechnological applications. 2017-12 Thesis NonPeerReviewed text en http://psasir.upm.edu.my/id/eprint/68881/7/FSTM%202018%2011%20IR%20edit.pdf Asmadi, Farhana Azmira (2017) Extraction, purification and characterization of polygalacturonase from durian (Durio zibethinus L.) seed. Masters thesis, Universiti Putra Malaysia. http://ethesis.upm.edu.my/id/eprint/11011/ Polygalacturonase Durian |
| spellingShingle | Polygalacturonase Durian Asmadi, Farhana Azmira Extraction, purification and characterization of polygalacturonase from durian (Durio zibethinus L.) seed |
| title | Extraction, purification and characterization of polygalacturonase from durian (Durio zibethinus L.) seed |
| title_full | Extraction, purification and characterization of polygalacturonase from durian (Durio zibethinus L.) seed |
| title_fullStr | Extraction, purification and characterization of polygalacturonase from durian (Durio zibethinus L.) seed |
| title_full_unstemmed | Extraction, purification and characterization of polygalacturonase from durian (Durio zibethinus L.) seed |
| title_short | Extraction, purification and characterization of polygalacturonase from durian (Durio zibethinus L.) seed |
| title_sort | extraction, purification and characterization of polygalacturonase from durian (durio zibethinus l.) seed |
| topic | Polygalacturonase Durian |
| url | http://psasir.upm.edu.my/id/eprint/68881/ http://psasir.upm.edu.my/id/eprint/68881/ http://psasir.upm.edu.my/id/eprint/68881/7/FSTM%202018%2011%20IR%20edit.pdf |