Optimization of illumina TruSeq Targeted RNA expression (TREx) library quality
RNA-seq has become an essential tool in molecular research. Nevertheless, application of RNA-seq was limited by cost and technical difficulties. Illumina has introduced the cost effective and ease to handle Truseq Targeted RNA Sequencing. In this study, we present the requirements and the optimizati...
| Main Authors: | Abu, Nadiah, Yeap, Swee Keong, Nordin, Noraini, Tan, Sheau Wei, Ho, Wan Yong, Mohammed Alitheen, Noorjahan Banu |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Penerbit Universiti Kebangsaan Malaysia
2018
|
| Online Access: | http://psasir.upm.edu.my/id/eprint/60474/ http://psasir.upm.edu.my/id/eprint/60474/1/Optimization%20of%20illumina%20TruSeq%20Targeted%20RNA%20expression%20%28TREx%29%20library%20quality.pdf |
Similar Items
Optimization of illumina Truseq Targeted RNA expression (TREx) library quality
by: Nadiah Abu,, et al.
Published: (2018)
by: Nadiah Abu,, et al.
Published: (2018)
RNA sequencing (RNA-Seq) of lymph node, spleen, and thymus transcriptome from wild Peninsular Malaysian cynomolgus macaque (Macaca fascicularis)
by: Uli, Joey Ee, et al.
Published: (2017)
by: Uli, Joey Ee, et al.
Published: (2017)
RNA-seq analysis in plant–fungus interactions
by: Ling, Ho Chai, et al.
Published: (2017)
by: Ling, Ho Chai, et al.
Published: (2017)
Fast processing RNA-Seq on multicore processor
by: Lee, Jia Bin, et al.
Published: (2021)
by: Lee, Jia Bin, et al.
Published: (2021)
RNA-seq and ChIP-seq as complementary approaches for comprehension of plant transcriptional regulatory mechanism
by: Muhammad, Isiaka Ibrahim, et al.
Published: (2020)
by: Muhammad, Isiaka Ibrahim, et al.
Published: (2020)
De novo assembly and analysis of RNA-seq data
by: Robertson, G., et al.
Published: (2010)
by: Robertson, G., et al.
Published: (2010)
SEQ2SEQ++: a multitasking-based seq2seq model to generate meaningful and relevant answers
by: Palasundram, Kulothunkan, et al.
Published: (2021)
by: Palasundram, Kulothunkan, et al.
Published: (2021)
Smart device tracking system using RFID (DeviceTrex)
by: Norazila, Alias
Published: (2010)
by: Norazila, Alias
Published: (2010)
MaTRU: A new NTRU-based cryptosystem
by: Coglianese, , M, et al.
Published: (2005)
by: Coglianese, , M, et al.
Published: (2005)
USM RECREATION PARK (TRU) - A SUSTAINABLE ASSET
OF THE UNIVERSITY
by: MPRC, Pusat Media & Perhubungan Awam
Published: (2017)
by: MPRC, Pusat Media & Perhubungan Awam
Published: (2017)
Transcriptome profiling of omental adipose tissues in human obesity by rna-seq / Ng Hien Fuh
by: Ng , Hien Fuh
Published: (2015)
by: Ng , Hien Fuh
Published: (2015)
RNA-Seq in 296 phased trios provides a high-resolution map of genomic imprinting
by: Jadhav, B., et al.
Published: (2019)
by: Jadhav, B., et al.
Published: (2019)
In-process truing for ELID (Electrolytic In-Process Dressing) grinding by pulsewidth control
by: Saleh, Tanveer, et al.
Published: (2011)
by: Saleh, Tanveer, et al.
Published: (2011)
Visible sound and audible movements: the Ca trù singer’s bamboo slab
by: Jaehnichen, Gisa
Published: (2013)
by: Jaehnichen, Gisa
Published: (2013)
Bromelain enhances the anti-tumor effects of cisplatin on 4T1 breast tumor model in vivo
by: Mohamad, Nurul Elyani, et al.
Published: (2019)
by: Mohamad, Nurul Elyani, et al.
Published: (2019)
Reducing the number of artifactual repeats in de novo assembly of RNA-Seq data by optimizing the assembly pipeline
by: Lee, Wei Kang, et al.
Published: (2017)
by: Lee, Wei Kang, et al.
Published: (2017)
Verification of sequences derived from de novo assembly of mRNA Seq. data of Gracilaria changii
by: Mohd Zainuddin, Nur Afiza
Published: (2015)
by: Mohd Zainuddin, Nur Afiza
Published: (2015)
Transcriptomic analysis of ganoderma-infected oil palms via RNA-seq technology and real-time PCR
by: Mohd Zuhar, Liyana
Published: (2017)
by: Mohd Zuhar, Liyana
Published: (2017)
Identification of Vibrio parahaemolyticus isolates by PCR targeted to the toxR gene and detection of virulence genes
by: Zulkifli, Y., et al.
Published: (2009)
by: Zulkifli, Y., et al.
Published: (2009)
In vivo tumor targeting and anti-tumor effects of 5-fluororacil loaded, folic acid targeted quantum dot system
by: Bwatanglang, Ibrahim Birma, et al.
Published: (2016)
by: Bwatanglang, Ibrahim Birma, et al.
Published: (2016)
Exosomal-microRNA transcriptome profiling of parental and CSC-like MDA-MB-231 cells in response to cisplatin treatment
by: Koh, May Zie, et al.
Published: (2022)
by: Koh, May Zie, et al.
Published: (2022)
Evaluation of immunomodulatory effect: selection of the correct targets for immunostimulation study
by: Yeap, Swee Keong, et al.
Published: (2011)
by: Yeap, Swee Keong, et al.
Published: (2011)
CodingQuarry: Highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts
by: Testa, Alison, et al.
Published: (2015)
by: Testa, Alison, et al.
Published: (2015)
Transcriptomics-based analysis using RNA-Seq of the coconut (Cocos nucifera) leaf in response to yellow decline phytoplasma infection
by: Nejat, Naghmeh, et al.
Published: (2015)
by: Nejat, Naghmeh, et al.
Published: (2015)
Identification of oil palm root-specific genes through mining of RNA-Seq data and RT-qPCR analysis
by: Subhi, Siti Masura, et al.
Published: (2021)
by: Subhi, Siti Masura, et al.
Published: (2021)
Highly pathogenic avian influenza virus nucleoprotein interacts with TREX complex adaptor protein Aly/REF
by: Balasubramaniam, Vinod R. M. T., et al.
Published: (2013)
by: Balasubramaniam, Vinod R. M. T., et al.
Published: (2013)
Identification of microRNA genes and their targets in whiteleg shrimp (Litopenaeus vannamei) / Khor Sheau Sean
by: Khor, Sheau Sean
Published: (2009)
by: Khor, Sheau Sean
Published: (2009)
RNA-seq reveals the RNA binding proteins, Hfq and RsmA, play various roles in virulence, antibiotic production and genomic flux in Serratia sp. ATCC 39006.
by: Wilf, N., et al.
Published: (2013)
by: Wilf, N., et al.
Published: (2013)
The best method for isolated total RNA from durian tissues
by: Ky, Huynh, et al.
Published: (2012)
by: Ky, Huynh, et al.
Published: (2012)
Evaluation of Differential Normalization and Analysis Procedures for Illumina Gene Expression Microarray Data Involving Small Changes
by: Johnstone, D., et al.
Published: (2013)
by: Johnstone, D., et al.
Published: (2013)
3-Bromo-1-Hydroxy-9,10-Anthraquinone (BHAQ) Inhibits Growth and Migration of the Human Breast Cancer Cell Lines MCF-7 and MDA-MB231
by: Akhtar, Muhammad Nadeem, et al.
Published: (2013)
by: Akhtar, Muhammad Nadeem, et al.
Published: (2013)
Influence of mast cells in drug-induced gingival overgrowth
by: Subramani, Tamilselvan, et al.
Published: (2013)
by: Subramani, Tamilselvan, et al.
Published: (2013)
The possible potential therapeutic targets for drug induced gingival overgrowth
by: Subramani, Tamilselvan, et al.
Published: (2013)
by: Subramani, Tamilselvan, et al.
Published: (2013)
A consensus approach to vertebrate de novo transcriptome assembly from RNA-seq data: assembly of the duck (Anas platyrhynchos) transcriptome
by: Moreton, Joanna, et al.
Published: (2014)
by: Moreton, Joanna, et al.
Published: (2014)
RNA-seq data of Ganoderma boninense at axenic culture condition and under in planta pathogen-oil palm (Elaeis guineensis Jacq.) interaction
by: Wong, Mui Yun, et al.
Published: (2019)
by: Wong, Mui Yun, et al.
Published: (2019)
Red hybrid tilapia (Oreochromis sp.) hindgut RNA-seq data after oral vaccination with a feed-based bivalent vaccine
by: Mohd Ali, Nur Shidaa, et al.
Published: (2024)
by: Mohd Ali, Nur Shidaa, et al.
Published: (2024)
TruFiX: a configurable trust-based cross-layer protocol for wireless sensor networks
by: Umar, Idris Abubakar, et al.
Published: (2017)
by: Umar, Idris Abubakar, et al.
Published: (2017)
3-bromo-1-hydroxy-9,10-anthraquinone (BHAQ) inhibits growth and migration of the human breast cancer cell lines MCF-7 and MDA-MB231
by: Abu, Nadiah, et al.
Published: (2013)
by: Abu, Nadiah, et al.
Published: (2013)
Synergistic cytotoxicity between elephantopus scaber and tamoxifen on MCF-7-derived multicellular tumor spheroid
by: Ho, Wan Yong, et al.
Published: (2021)
by: Ho, Wan Yong, et al.
Published: (2021)
Relationship between virus replication and apoptosis events in IgM + cells from chicken spleen and bursa of Fabricius infected with Malaysia strain of very virulent infectious bursal disease virus
by: Teo, Kristeen Ye Wen, et al.
Published: (2016)
by: Teo, Kristeen Ye Wen, et al.
Published: (2016)
Similar Items
-
Optimization of illumina Truseq Targeted RNA expression (TREx) library quality
by: Nadiah Abu,, et al.
Published: (2018) -
RNA sequencing (RNA-Seq) of lymph node, spleen, and thymus transcriptome from wild Peninsular Malaysian cynomolgus macaque (Macaca fascicularis)
by: Uli, Joey Ee, et al.
Published: (2017) -
RNA-seq analysis in plant–fungus interactions
by: Ling, Ho Chai, et al.
Published: (2017) -
Fast processing RNA-Seq on multicore processor
by: Lee, Jia Bin, et al.
Published: (2021) -
RNA-seq and ChIP-seq as complementary approaches for comprehension of plant transcriptional regulatory mechanism
by: Muhammad, Isiaka Ibrahim, et al.
Published: (2020)