Variation in turfgrasses demonstrated by amplified fragment length polymorphism (AFLP)

The classification of turfgrass cultivars is difficult as it has mostly relied on morphological characteristics that are multigenic, quantitative, and susceptible to modification by environmental factors. In this study, we employed an Amplified Fragment Length Polymorphic (AFLP) technique to disting...

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Main Authors: Ho, Chai Ling, Kulaveerasingam, Harikrishna, Kandasamy, Kodi Isparan, Chin, Chiew Foan, Abdul Rahman, Siti Suhaila
Format: Article
Language:English
Published: Malaysian Society for Molecular Biology and Biotechnology 2003
Online Access:http://psasir.upm.edu.my/id/eprint/58530/
http://psasir.upm.edu.my/id/eprint/58530/1/Variation%20in%20turfgrasses%20demonstrated%20by%20amplified%20fragment%20length%20polymorphism%20%28AFLP%29.pdf
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author Ho, Chai Ling
Kulaveerasingam, Harikrishna
Kandasamy, Kodi Isparan
Chin, Chiew Foan
Abdul Rahman, Siti Suhaila
author_facet Ho, Chai Ling
Kulaveerasingam, Harikrishna
Kandasamy, Kodi Isparan
Chin, Chiew Foan
Abdul Rahman, Siti Suhaila
author_sort Ho, Chai Ling
building UPM Institutional Repository
collection Online Access
description The classification of turfgrass cultivars is difficult as it has mostly relied on morphological characteristics that are multigenic, quantitative, and susceptible to modification by environmental factors. In this study, we employed an Amplified Fragment Length Polymorphic (AFLP) technique to distinguish between several turfgrass samples (including two ‘offtypes’) that were collected from Malaysian golf courses in comparison to four Australian Cynodon samples. The results clearly demonstrated the applicability of AFLP as a method to identify and fingerprint turfgrass samples and their ‘offtypes’. The agreement of the three dendrograms generated by AFLP, Arbitrary Primed Polymorphic DNA (AP-PCR) and Internal Transcribed Spacer (ITS) gives good confidence in the use of the AFLP data for identification and analysis of relationships between the Australian Cynodon samples. The occurrence of ‘offtypes’ at one of the Malaysian golf courses is possibly a result from somatic mutation (TD6) or sod contamination at planting (TW4).
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institution Universiti Putra Malaysia
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language English
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publisher Malaysian Society for Molecular Biology and Biotechnology
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spelling upm-585302018-01-22T06:02:36Z http://psasir.upm.edu.my/id/eprint/58530/ Variation in turfgrasses demonstrated by amplified fragment length polymorphism (AFLP) Ho, Chai Ling Kulaveerasingam, Harikrishna Kandasamy, Kodi Isparan Chin, Chiew Foan Abdul Rahman, Siti Suhaila The classification of turfgrass cultivars is difficult as it has mostly relied on morphological characteristics that are multigenic, quantitative, and susceptible to modification by environmental factors. In this study, we employed an Amplified Fragment Length Polymorphic (AFLP) technique to distinguish between several turfgrass samples (including two ‘offtypes’) that were collected from Malaysian golf courses in comparison to four Australian Cynodon samples. The results clearly demonstrated the applicability of AFLP as a method to identify and fingerprint turfgrass samples and their ‘offtypes’. The agreement of the three dendrograms generated by AFLP, Arbitrary Primed Polymorphic DNA (AP-PCR) and Internal Transcribed Spacer (ITS) gives good confidence in the use of the AFLP data for identification and analysis of relationships between the Australian Cynodon samples. The occurrence of ‘offtypes’ at one of the Malaysian golf courses is possibly a result from somatic mutation (TD6) or sod contamination at planting (TW4). Malaysian Society for Molecular Biology and Biotechnology 2003 Article PeerReviewed application/pdf en http://psasir.upm.edu.my/id/eprint/58530/1/Variation%20in%20turfgrasses%20demonstrated%20by%20amplified%20fragment%20length%20polymorphism%20%28AFLP%29.pdf Ho, Chai Ling and Kulaveerasingam, Harikrishna and Kandasamy, Kodi Isparan and Chin, Chiew Foan and Abdul Rahman, Siti Suhaila (2003) Variation in turfgrasses demonstrated by amplified fragment length polymorphism (AFLP). Asia Pacific Journal of Molecular Biology and Biotechnology, 11 (1). pp. 51-55. ISSN 0128-7451 http://www.msmbb.org.my/apjmbb/html111/111.htm
spellingShingle Ho, Chai Ling
Kulaveerasingam, Harikrishna
Kandasamy, Kodi Isparan
Chin, Chiew Foan
Abdul Rahman, Siti Suhaila
Variation in turfgrasses demonstrated by amplified fragment length polymorphism (AFLP)
title Variation in turfgrasses demonstrated by amplified fragment length polymorphism (AFLP)
title_full Variation in turfgrasses demonstrated by amplified fragment length polymorphism (AFLP)
title_fullStr Variation in turfgrasses demonstrated by amplified fragment length polymorphism (AFLP)
title_full_unstemmed Variation in turfgrasses demonstrated by amplified fragment length polymorphism (AFLP)
title_short Variation in turfgrasses demonstrated by amplified fragment length polymorphism (AFLP)
title_sort variation in turfgrasses demonstrated by amplified fragment length polymorphism (aflp)
url http://psasir.upm.edu.my/id/eprint/58530/
http://psasir.upm.edu.my/id/eprint/58530/
http://psasir.upm.edu.my/id/eprint/58530/1/Variation%20in%20turfgrasses%20demonstrated%20by%20amplified%20fragment%20length%20polymorphism%20%28AFLP%29.pdf