SSR mining in oil palm EST database: application in oil palm germplasm diversity studies.

QR Code

SSR mining in oil palm EST database: application in oil palm germplasm diversity studies.

This study reports on the detection of additional expressed sequence tags (EST) derived simple sequence repeat (SSR) markers for the oil palm. A large collection of 19243 Elaeis guineensis ESTs were assembled to give 10258 unique sequences, of which 629 ESTs were found to contain 722 SSRs with a var...

Full description

Bibliographic Details
Main Authors:	Ngoot-Chin, Ting, Mohd Zaki, Noorhariza, Rosli, Rozana, Eng-Ti , Leslie Low, Ithnin, Maizura, Suan-Choo , Chia, Soon-Guan , Tan, Rajinder, Singh
Format:	Article
Language:	English English
Published:	Indian Academy of Sciences 2010
Subjects:	Oil palm - Germplasm resources. Genetic variation. Oil-palm - Breeding.
Online Access:	http://psasir.upm.edu.my/id/eprint/16819/ http://psasir.upm.edu.my/id/eprint/16819/1/SSR%20mining%20in%20oil%20palm%20EST%20database.pdf

Similar Items

Genetic diversity of MPOB-senegal oil palm germplasm based on quantitative traits and microsatellite markers
by: Myint, Khin Aye
Published: (2019)

Exploiting an oil palm EST database for the development of gene-derived SSR markers and their exploitation for assessment of genetic diversity.
by: Singh, Rajinder, et al.
Published: (2008)

Cryopreservation of zygotic and somatic embryos of oil palm (Elaeis guineensis jacq.) for germplasm conservation
by: Periasamy, Suranthran
Published: (2012)

Transcriptome analysis of mesocarp tissues in oil palm (Elaeis guineessis jacq.) MPOB-angola dura across various developmental stages
by: Morris, Priscilla Elizabeth
Published: (2019)

Isolation and characterisation of transcripts for LEAFY, GLOBOSA and DROOPING LEAF transcription factors from normal and mantled oil palm inflorescence
by: Vetaryan, Sharmilah
Published: (2018)

Genetic Studies in Some Oil Palm Breeding Populations in Malaysia
by: Ahiekpor, Emmanuel Kwaku Seke
Published: (1981)

Identification of sequence variants in key vitamin E genes from Elaeis guineensis Jacq. germplasm for development of DNA-based markers
by: Rufa'i, Babura Sulaiman
Published: (2018)

Clonal propagation amenability of selected elite (DxP) and clonal tenera ortets of oil palm (Elaeis guineensis Jacq.)
by: Abdul Rahman, Siti Rahmah
Published: (2019)

Toxicity and sub-lethal effects of bromadiolone and chlorophacinone on barn owl, Tyto alba javanica Gmelin in oil palm plantations
by: Salim, Hasber
Published: (2014)

Evaluation of the simple sequence repeat (SSR) genotyping of Elaeis oleifera germplasm / Wan Nurhayati Wan Hanafi
by: Wan Hanafi, Wan Nurhayati
Published: (2018)

Association of SNP markers with height increment in two MPOB-Angola oil palm populations, Malaysia
by: Ong, Pei Wen
Published: (2012)

Non-destructive estimation of oil palm yield and quality with fluorescence sensing
by: Abu Kassim, Norul Husna
Published: (2016)

Growth, carbon assimilation and biochemical changes of oil palm seedlings (Elaeis guineensis Jacq.) in climate change factors with potassium fertilisation
by: Tuan Mohd Razali, Tuan Syaripah Najihah
Published: (2021)

Oil palm empty fruit bunch biochar and compost as amendment for improvement of polybag-growing media and oil palm seedlings
by: Radin, Rovica
Published: (2017)

Development and evaluation of tenera oil palm progenies derived from single, double and three-way crosses
by: Sritharan, Kandha
Published: (2020)

Assessing the Competitiveness of the Malaysian Palm Oil Industry
by: Subramaniam, Devagi
Published: (1997)

The effect of exchange rate and palm oil price towards export earnings of palm oil industry in Malaysia / Noordina Hassan
by: Hassan, Noordina
Published: (2007)

Saccharification Of Palm Oil Mill Effluent Solid And Oil Palm Fruit Fiber To Fermentable Sugars For Acetone-Butanol-Ethanol Fermentation
by: Khaw, Teik Seong
Published: (2001)

Recovery of Palm Carotene from Palm Oil and Hydrolysed Palm Oil Using Adsorption Column Chromatography
by: Ling, You Li
Published: (2006)

Construction of high density genetic linkage maps and fine mapping of quantitative trait loci associated with yield components and fatty acid composition in oil palm
by: Ting, Ngoot Chin
Published: (2018)

Basal Stem Rot of Oil Palm : Incidence, Etiology and Control
by: Hashim, Khairudin
Published: (1990)

Development of 3 dimensional point cloud analysis technique to determine maturity of oil palm fresh fruit bunch based on frond position in oil palm phyllotaxis
by: Mustafa Albakri, Zulfadhli
Published: (2018)

Impact of crude palm oil export duties on Malaysian palm oil industry
by: Ibragimov, Abdulla Gafurjanovich
Published: (2014)

Life cycle and justification of sustainable chemical control of oil palm fruit bunch moths on peat oil palm estates.
by: Su, Chong Ming
Published: (2020)

Fundamental study of oil palm fruit digestion process
by: Yayat Nurhidayat
Published: (2014)

An Examination of Oil Palm Flowering: Molecular Biology and Anatomical Analysis
by: Syed Alwee, Sharifah Shahrul Rabiah
Published: (1998)

Development and validation of Sawit, an oil palm growth and yield model
by: Cheah, See Siang
Published: (2023)

Removal of oil from oil palm empty fruit bunches spikelet using steam and water processes
by: Gomez, Javier Hernando Chavarro
Published: (2014)

Identification of Quantitative Trait Loci for Tissue Culture Amenability Traits in a Dura X Pisifera F1 Oil Palm Population
by: Ting, Ngoot Chin
Published: (2006)

Proline Accumulation in Oil Palm Polyembryogenic Cultures Under Various Conditions
by: Hashim, Ahmad Tarmizi
Published: (1992)

Application of sonic tomograph for basal stem rot detection in oil palm
by: Ibrahim, Ishaq
Published: (2016)

A single chassis integrated machine system for transplanting oil palm seedlings
by: Roodi, Siamak Moslehi
Published: (2011)

Development of variable rate technology granular fertilizer applicator for oil palm plantations
by: Ishola, Tajudeen Abiodun
Published: (2013)

Determination Of Hydrophilic Phenolic Compounds In Palm Oil And Palm Kernel Oil
by: Abdullah, Fadzlina
Published: (2009)

Crystallization Behavior of Palm Oil Blends and Palm Oil-Based Fluid Shortenings
by: Mat Sahri, Miskandar
Published: (2006)

Phytotoxicity of oil palm residues used as mulch for lettuce, tomato, cucumber and amaranth seedlings
by: Zamri, Mohd Zakwan
Published: (2016)

Determination of Natural and Synthetic Antioxidants in Palm Oil Using Fourier Transform Infrared Spectroscopy
by: Ammawath, Wanna
Published: (2006)

Designing a tracked prime mover for in-field collection and transportation of oil palm fresh fruit bunches on low bearing capacity peat terrain
by: Ghassemi, Mohammad Hadi
Published: (2011)

Oil Palm and Nipah Frond Silages and Their Utilization by Sheep
by: Abdalla, Sideig Adam
Published: (2001)

Trade competitiveness of palm oil downstream industry in Malaysia
by: Othman, Norashida
Published: (2019)