Sequence analysis of 16S rRNA gene and 16S–23S rRNA gene intergenic spacer region for differentiation of probiotics Lactobacillus strains isolated from the gastrointestinal tract of chicken
Twelve probiotic Lactobacillus strains which were previously identified with classical biochemical tests were re-identified using molecular methods. Comparative sequence analyses of the 16S rRNA gene and 16S–23S rRNA gene intergenic spacer region (ISR) were applied. Results of the study showed that...
| Main Authors: | Lee, Chin Mei, Sieo, Chin Chin, Wong, Clemente Michael Vui Ling, Abdullah, Norhani, Ho, Yin Wan |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Springer
2008
|
| Online Access: | http://psasir.upm.edu.my/id/eprint/16674/ http://psasir.upm.edu.my/id/eprint/16674/1/Sequence%20analysis%20of%2016S%20rRNA%20gene%20and%2016S%E2%80%9323S%20rRNA%20gene%20intergenic%20spacer%20region%20for%20differentiation%20of%20probiotics%20Lactobacillus%20strains%20isolated%20from%20the%20gastrointestinal%20tract%20of%20chicken.pdf |
Similar Items
Molecular characterization of ornamental fish
species (poeciliidae) using mitochondrial dna12s rRNA
anD 16S rRNA genes
by: Ghazali, Siti Norsywazni
Published: (2015)
by: Ghazali, Siti Norsywazni
Published: (2015)
16S rRNA gene sequencing for phylogenetic analysis of Malaysian sea anemones
by: Zulkipli, Farah Hanis, et al.
Published: (2014)
by: Zulkipli, Farah Hanis, et al.
Published: (2014)
Phylogenetic relationship of phosphate solubilizing bacteria according to 16S rRNA genes
by: Nobandegani, Mohammad Bagher Javadi, et al.
Published: (2014)
by: Nobandegani, Mohammad Bagher Javadi, et al.
Published: (2014)
Diversity of bovine rumen methanogens in vitro in the presence of condensed tannins, as determined by sequence analysis of 16S rRNA gene library
by: Hui, Yin Tan, et al.
Published: (2011)
by: Hui, Yin Tan, et al.
Published: (2011)
Molecular approach to the identification and phylogenetic relationship among actinopterygii using mitochondrial DNA 12S rRNA, 16S rRNA and cytochrome B genes in Peninsular Malaysia
by: Samrah, Siti Farah Quraishia
Published: (2018)
by: Samrah, Siti Farah Quraishia
Published: (2018)
Detection of Leptospira species in environmental samples by amplification of 16S rRNA and rpoβ genes
by: Nurul Farhana Zulkifli,, et al.
Published: (2018)
by: Nurul Farhana Zulkifli,, et al.
Published: (2018)
Phylogenetics of Malaysian Betta bubblenest brooders based on 16S rRNA
by: Jamaluddin, Jamsari Amirul Firdaus, et al.
Published: (2009)
by: Jamaluddin, Jamsari Amirul Firdaus, et al.
Published: (2009)
Chicken gut microbial communities study based on high-throughput 16S rRNA metagenomics analysis
by: Mohd Asrore, Mohd Shaufi, et al.
Published: (2015)
by: Mohd Asrore, Mohd Shaufi, et al.
Published: (2015)
Deciphering chicken gut microbial dynamics based on high-throughput 16S rRNA metagenomics analyses
by: Mohd Asrore, Mohd Shaufi, et al.
Published: (2015)
by: Mohd Asrore, Mohd Shaufi, et al.
Published: (2015)
Phylogenetic relationships within the genus Holothuria inferred from 16S mitochondrial rRNA gene sequences
by: Kamarudin, Kamarul Rahim, et al.
Published: (2016)
by: Kamarudin, Kamarul Rahim, et al.
Published: (2016)
Phylogeny of sea cucumber (Echinodermata: Holothuroidea)
as inferred from 16S mitochondrial rRNA gene sequences
by: Kamarudin, Kamarul Rahim, et al.
Published: (2010)
by: Kamarudin, Kamarul Rahim, et al.
Published: (2010)
Phylogeny of sea cucumber (Echinodermata: Holothuroidea) as inferred from 16S Mitochondrial rRNA gene sequences
by: Kamarudin, Kamarul Rahim
Published: (2011)
by: Kamarudin, Kamarul Rahim
Published: (2011)
Paraphyly of the Genus Holothuria (Aspidochirotida: Holothuriidae) as Inferred from 16S Mitochondrial rRNA Gene Sequences
by: Kamarudin, Kamarul Rahim, et al.
Published: (2006)
by: Kamarudin, Kamarul Rahim, et al.
Published: (2006)
Phylogenetic relationships within the Genus Holothuria inferred from 16S Mitochondiral rRNA Gene Sequences
by: Kamarul Rahim Kamarudin,, et al.
Published: (2016)
by: Kamarul Rahim Kamarudin,, et al.
Published: (2016)
Phylogeny of sea cucumber (echinodermata: holothuroidea) as inferred from 16s mitochondrial rRNA gene sequences
by: Kamarul Rahim Kamarudin,, et al.
Published: (2010)
by: Kamarul Rahim Kamarudin,, et al.
Published: (2010)
Phylogenetic relationships within the genus holothuria inferred from 16s mitochondiral rRNA gene sequences
by: Kamarudin, Kamarul Rahim, et al.
Published: (2016)
by: Kamarudin, Kamarul Rahim, et al.
Published: (2016)
Phylogeny of sea cucumber (echinodermata: holothuroidea) as inferred from 16s mitochondrial rRNa gene sequences
by: Kamarudin, Kamarul Rahim, et al.
Published: (2010)
by: Kamarudin, Kamarul Rahim, et al.
Published: (2010)
Estimation of 16S RNA gene copy number in several probiotic Lactobacillus strains isolated from the gastrointestinal tract of chicken.
by: Chin, Mei Lee, et al.
Published: (2008)
by: Chin, Mei Lee, et al.
Published: (2008)
16S rRNA metagenomics data on the bacterial communities in Poring Hot Spring, Sabah, Malaysia
by: Fazal, Bak Zaibah, et al.
Published: (2024)
by: Fazal, Bak Zaibah, et al.
Published: (2024)
Characterization of 16S rRNA and internal transcribed spacer (ITS) region gene sequencing of the Aeromonas species isolated from cultured freshwater fishes
by: Khairul Parman, Diyana Nadhirah
Published: (2013)
by: Khairul Parman, Diyana Nadhirah
Published: (2013)
Effect of condensed tannins on bovine rumen protist diversity based on 18S rRNA gene sequences
by: Tan, Hui Yin, et al.
Published: (2013)
by: Tan, Hui Yin, et al.
Published: (2013)
Overestimation of the abundance of sulfate-reducing bacteria in human feces by quantitative PCR targeting the Desulfovibrio 16S rRNA gene
by: Christophersen, Claus, et al.
Published: (2011)
by: Christophersen, Claus, et al.
Published: (2011)
Genetic Variation among Sea Cucumbers (Echinodermata: Holothuroidea) in Malaysia as inferred from 16S Mitochondrial rRNA Gene
by: Kamarul Zaman, Nur Hazami, et al.
Published: (2006)
by: Kamarul Zaman, Nur Hazami, et al.
Published: (2006)
Identification of prawn pathogen bacteria Vibrio spp. Using biochemical test and 16S rRNA gene sequence analysis
by: Siti Rokhaiya, Binti Hj.Biollah
Published: (2012)
by: Siti Rokhaiya, Binti Hj.Biollah
Published: (2012)
Phylogeny Of Sarawak Green Sea Turtle (Chelonia Mydas) Using The "D-Loop" Region And 16s rRNA Gene
by: Nurhartini Kamalia, Binti Yahya
Published: (2009)
by: Nurhartini Kamalia, Binti Yahya
Published: (2009)
Molecular systematic of bornean fanged frogs (Genus limnonectes) using mitochondrial DNA subunit 16S rRNA gene
by: Mohammad Rufino Baipura, b Muhammad.
Published: (2005)
by: Mohammad Rufino Baipura, b Muhammad.
Published: (2005)
Genotypic identification of oral bacteria using 16s rRNA gene in children with and without early childhood caries in Kelantan
by: Al-Hudhairy, Salahddin Abdulqader Othman
Published: (2016)
by: Al-Hudhairy, Salahddin Abdulqader Othman
Published: (2016)
Molecular identification of Lactobacillus spp. isolated from the honey comb of the honey bee (Apis dorsata) by 16S rRNA gene sequencing
by: Tajabadi, Naser, et al.
Published: (2013)
by: Tajabadi, Naser, et al.
Published: (2013)
Evidence of bacteriophage-mediated horizontal transfer of bacterial 16S rRNA genes in the viral metagenome of the marine sponge Hymeniacidon perlevis
by: Harrington, C., et al.
Published: (2012)
by: Harrington, C., et al.
Published: (2012)
Polymerase chain reaction - restriction fragment length polymorphisms (PCR-RFLP) analysis of 16s rRNA gene in myotis ridley
by: Liew, Pei Sing.
Published: (2005)
by: Liew, Pei Sing.
Published: (2005)
Species identification of potential probiotic lactic acid bacteria isolated from Malaysian fermented food based on 16S ribosomal RNA (16S rRNA) and internal transcribed spacer (ITS) sequences
by: Yaacob Ilyanie,, et al.
Published: (2023)
by: Yaacob Ilyanie,, et al.
Published: (2023)
Phylogenetic Analysis of Mystus species using 16S rRNA in Batang Kerang, Balai Ringin, Sarawak
by: Goh, Pei Tian
Published: (2015)
by: Goh, Pei Tian
Published: (2015)
Rapid detection and identification of pathogens in patients with continuous ambulatory peritoneal dialysis (CAPD) associated peritonitis by 16s rRNA gene sequencing
by: Ahmadi, S. H., et al.
Published: (2013)
by: Ahmadi, S. H., et al.
Published: (2013)
Characterisation of gut microbiota in Malaysian cancer patients using V3-V4 region of 16S rRNA gene sequencing
by: Sidi Omar, Siti Farah Norasyikeen, et al.
Published: (2025)
by: Sidi Omar, Siti Farah Norasyikeen, et al.
Published: (2025)
Detection of Leptospira species targeting 16S rRNA, rpoB, and lipL32 gene from clinical and environmental sources
by: Zulkifli, Nurul Farhana
Published: (2019)
by: Zulkifli, Nurul Farhana
Published: (2019)
Molecular characterization of 16S rRNA and internal transcribed spacer (ITS) regions of Aeromonas spp. isolated from cultured freshwater fishes in Malaysia
by: K.P., Diyana Nadhirah, et al.
Published: (2016)
by: K.P., Diyana Nadhirah, et al.
Published: (2016)
Phylogeny and Phylogeography of Aethalops from Sundaland using Mitochondrial 12S rRNA Gene
by: Tingga,, R. C. T., et al.
Published: (2012)
by: Tingga,, R. C. T., et al.
Published: (2012)
Performance and caecal microbial community determined using qPCR and V3 region of 16S rRNA gene sequencing in laying hens fed prebiotic, probiotic and synbiotic diets
by: Tang, Shirley Gee Hoon, et al.
Published: (2014)
by: Tang, Shirley Gee Hoon, et al.
Published: (2014)
Inhibition of the endosymbiont “Candidatus Midichloria mitochondrii” during 16S rRNA gene profiling reveals potential pathogens in Ixodes ticks from Australia
by: Gofton, A., et al.
Published: (2015)
by: Gofton, A., et al.
Published: (2015)
Polyphyly of Tomopterna (Amphibia: Ranidae) based on sequences of the mitochondrial 16S and 12S rRNA genes, and ecological biogeography of Malagasy relict amphibian groups
by: Vences, Miguel, et al.
Published: (2000)
by: Vences, Miguel, et al.
Published: (2000)
Similar Items
-
Molecular characterization of ornamental fish
species (poeciliidae) using mitochondrial dna12s rRNA
anD 16S rRNA genes
by: Ghazali, Siti Norsywazni
Published: (2015) -
16S rRNA gene sequencing for phylogenetic analysis of Malaysian sea anemones
by: Zulkipli, Farah Hanis, et al.
Published: (2014) -
Phylogenetic relationship of phosphate solubilizing bacteria according to 16S rRNA genes
by: Nobandegani, Mohammad Bagher Javadi, et al.
Published: (2014) -
Diversity of bovine rumen methanogens in vitro in the presence of condensed tannins, as determined by sequence analysis of 16S rRNA gene library
by: Hui, Yin Tan, et al.
Published: (2011) -
Molecular approach to the identification and phylogenetic relationship among actinopterygii using mitochondrial DNA 12S rRNA, 16S rRNA and cytochrome B genes in Peninsular Malaysia
by: Samrah, Siti Farah Quraishia
Published: (2018)