Molecular dynamics study of the structure, flexibility and dynamics of thermostable L1 lipase at high temperatures.
Molecular Dynamics (MD) simulations have been used to understand how protein structure, dynamics, and flexibility are affected by adaptation to high temperature for several years. We report here the results of the high temperature MD simulations of Bacillus stearothermophilus L1 (L1 lipase). We foun...
| Main Authors: | Abedi Karjiban, Roghayeh, Abdul Rahman, Mohd Basyaruddin, Basri, Mahiran, Salleh, Abu Bakar, Jacobs, Donald, Abdul Wahab, Habibah |
|---|---|
| Format: | Article |
| Language: | English English |
| Published: |
Springer
2009
|
| Subjects: | |
| Online Access: | http://psasir.upm.edu.my/id/eprint/15706/ http://psasir.upm.edu.my/id/eprint/15706/1/Molecular%20dynamics%20study%20of%20the%20structure.pdf |
Similar Items
Thermodynamic evaluation and molecular dynamic simulation of thermostable lipase from ; Bacillus stearothermophilus PI, Bacillus stearothermophilus LI and Geobacillus stearothermophilus Strain TI
by: Abdul Rahman, Mohd Basyaruddin, et al.
Published: (2007)
by: Abdul Rahman, Mohd Basyaruddin, et al.
Published: (2007)
Molecular Dynamics of Thermoalkalophilic Lipases Unfolding At High Temperatures
by: Karjiban, Roghayeh Abedi
Published: (2008)
by: Karjiban, Roghayeh Abedi
Published: (2008)
Thermal behavioral analysis of bacillus stearothermophilus L1 lipase at elevated temperature by molecular dynamics simulation method
by: Abdul Rahman, Mohd Basyaruddin, et al.
Published: (2007)
by: Abdul Rahman, Mohd Basyaruddin, et al.
Published: (2007)
Effect of transition metal ion substitution on thermostable T1 lipase activity
by: Harun, Harmiza
Published: (2013)
by: Harun, Harmiza
Published: (2013)
Thermostability of the Recombinant Haemagglutinin-Neuraminidase Glycoproteins of Newcastle Disease Virus
by: Tang, Yik Kiong
Published: (2003)
by: Tang, Yik Kiong
Published: (2003)
Deciphering the flexibility and dynamics of Geobacillus zalihae strain T1 lipase at high temperatures by molecular dynamics simulation
by: Abdul Rahman, Mohd Basyaruddin, et al.
Published: (2009)
by: Abdul Rahman, Mohd Basyaruddin, et al.
Published: (2009)
Characterization Of A Thermostable Lipase From Aneurinibacillus Thermoaerophilus Strain Hz
by: Masomian, Malihe
Published: (2007)
by: Masomian, Malihe
Published: (2007)
Development of yeast expression systems for producing thermostable T1 lipase
by: Oslan, Siti Nurbaya
Published: (2012)
by: Oslan, Siti Nurbaya
Published: (2012)
Structural Studies Of A Chemically Modified Thermostable Lipase From Geobacillus Sp. Strain T1
by: Cheong, Kok Whye
Published: (2007)
by: Cheong, Kok Whye
Published: (2007)
Lipase-catalyzed preparation of galactose oleate ester in ionic liquid
by: Mohd Saupi, Hanim Salami
Published: (2012)
by: Mohd Saupi, Hanim Salami
Published: (2012)
Regiospecificity modification of Geobacillus zalihae T1 lipase via molecular engineering approaches
by: Albayati, Samah Hashim Khaleel
Published: (2022)
by: Albayati, Samah Hashim Khaleel
Published: (2022)
On the importance of the small domain in the thermostability of thermoalkalophilic lipases from L1 and T1: insights from molecular dynamics simulation
by: Karjiban, Roghayeh Abedi, et al.
Published: (2010)
by: Karjiban, Roghayeh Abedi, et al.
Published: (2010)
Expression And Characterization Of Recombinant Thermostable L2 Lipase In Pichia Pastoris
by: Sabri, Suriana
Published: (2007)
by: Sabri, Suriana
Published: (2007)
Production of thermostable L2 lipase using recombinant Pichia pastoris
by: Shahidan, Noor Hidayah
Published: (2012)
by: Shahidan, Noor Hidayah
Published: (2012)
Gene cloning and recombinant protein expression of lipase from marine bacterium
by: Noh, Laila
Published: (2014)
by: Noh, Laila
Published: (2014)
Production, Purification And Characterization Of Thermostable Lipase From An Extremophilic Bacillus Subtilis Ns 8
by: Olusesan, Akanbi Taiwo
Published: (2010)
by: Olusesan, Akanbi Taiwo
Published: (2010)
Structural elucidation of thermostable L2 lipase based on ground and microgravity grown crystals
by: Mohd Shariff, Fairolniza
Published: (2012)
by: Mohd Shariff, Fairolniza
Published: (2012)
Effects of Fermentation Conditions on the Production of Thermostable Lipase by Recombinant E. Coli
by: Ismail, Fadzlirahimi
Published: (2006)
by: Ismail, Fadzlirahimi
Published: (2006)
Structure elucidation of a thermostable organic solvent-tolerant recombinant HZ lipase and determination of its thermostability
by: Masomian, Malihe
Published: (2013)
by: Masomian, Malihe
Published: (2013)
Development of protease deficient Meyerozyma guilliermondii strain so for overexpression of thermostable T1 lipase
by: Lorrine, Okojie Eseoghene
Published: (2022)
by: Lorrine, Okojie Eseoghene
Published: (2022)
Biomanufacturing of an organic solvent tolerant and thermostable lipase by recombinant E. coli
by: Nelofer, Rubina
Published: (2012)
by: Nelofer, Rubina
Published: (2012)
Molecular dynamics of thermoenzymes at high temperature and pressure: a review
by: Karjiban, Roghayeh Abedi, et al.
Published: (2014)
by: Karjiban, Roghayeh Abedi, et al.
Published: (2014)
Molecular dynamics simulation of palmitate ester self-assembly with diclofenac
by: Karjiban, Roghayeh Abedi, et al.
Published: (2012)
by: Karjiban, Roghayeh Abedi, et al.
Published: (2012)
Isolation, Production and Characterization of Thermostable Lipase from Bacillus Sp. Strain L2
by: Mohammed Mukred, Abdul Daim
Published: (2004)
by: Mohammed Mukred, Abdul Daim
Published: (2004)
Kinetics, crystallization, and structural elucidation of thermostable D311E T1 lipase variant from Geobacillus zalihae
by: Ruslan, Rudzanna
Published: (2013)
by: Ruslan, Rudzanna
Published: (2013)
Rational design of ARM lipase stabilization
by: Abd Rahim, Arilla Sri Masayu
Published: (2012)
by: Abd Rahim, Arilla Sri Masayu
Published: (2012)
Pressure-induced unfolding of L1 lipase using molecular dynamics simulations and quantum mechanics calculations
by: Lim, Wui Zhuan
Published: (2016)
by: Lim, Wui Zhuan
Published: (2016)
Molecular dynamics simulations using graphics processing units
by: Baker, J.A., et al.
Published: (2011)
by: Baker, J.A., et al.
Published: (2011)
Structural properties of nonionic Tween80 micelle in water
elucidated by molecular dynamics simulation.
by: Karjiban, Roghayeh Abedi, et al.
Published: (2012)
by: Karjiban, Roghayeh Abedi, et al.
Published: (2012)
The effect of temperature and pressure on the self-assembly of dipalmitoylphosphatidylcholine using coarse-grained molecular dynamics
by: Shaari, Nurul Syahidah, et al.
Published: (2014)
by: Shaari, Nurul Syahidah, et al.
Published: (2014)
Structure and dynamics of Candida rugosa lipase: the role of organic solvent
by: Tejo, Bimo Ario, et al.
Published: (2004)
by: Tejo, Bimo Ario, et al.
Published: (2004)
Molecular docking and molecular dynamic simulation of 1,3-Benzoxazine derivatives against penicillin binding protein 2A of methicillin-resistant Staphlyococcus aureus
by: Alharbi, Nourah Jamaan H
Published: (2023)
by: Alharbi, Nourah Jamaan H
Published: (2023)
Identification of lipase inhibitor from orthosiphon stamineus benth and analysis of lipase-inhibitor complex interaction
by: Alias, Norsyuhada
Published: (2016)
by: Alias, Norsyuhada
Published: (2016)
Direct purification of Burkholderia Pseudomallei lipase from fermentation broth using aqueous two-phase systems.
by: Ooi, Chien Wei, et al.
Published: (2009)
by: Ooi, Chien Wei, et al.
Published: (2009)
Extraction, purification, microencapsulation and characterization of lipase from pumpkin (Cucurbita moschata Duchesne ex Poir.) seed
by: Mohd Hussin, Muhaini
Published: (2016)
by: Mohd Hussin, Muhaini
Published: (2016)
Identification of lipases with activity towards monoacylglycerol by criterion of conserved cap architectures
by: Riegler-Berket, Lina, et al.
Published: (2018)
by: Riegler-Berket, Lina, et al.
Published: (2018)
Production, Expression And Characterization Of A Heat-Stable Organic Solvent Tolerant Lipase From Bacillus Sp, Strain 42
by: Eltaweel, Mohamed Abdallah
Published: (2005)
by: Eltaweel, Mohamed Abdallah
Published: (2005)
Enhancement of enzymatic properties of T1 lipase by saturation mutagenesis at glutamine 114
by: Ab. Wahab, Roswanira
Published: (2012)
by: Ab. Wahab, Roswanira
Published: (2012)
Structural and functional cold adaptation of AMS8 lipase through in-silico, physicochemical and biophysical approaches
by: Mohd Fuzi, Siti Farhanie
Published: (2017)
by: Mohd Fuzi, Siti Farhanie
Published: (2017)
Molecular dynamics simulation of the phosphorylation-induced conformational changes of a tau peptide fragment
by: Lyons, Albert, et al.
Published: (2014)
by: Lyons, Albert, et al.
Published: (2014)
Similar Items
-
Thermodynamic evaluation and molecular dynamic simulation of thermostable lipase from ; Bacillus stearothermophilus PI, Bacillus stearothermophilus LI and Geobacillus stearothermophilus Strain TI
by: Abdul Rahman, Mohd Basyaruddin, et al.
Published: (2007) -
Molecular Dynamics of Thermoalkalophilic Lipases Unfolding At High Temperatures
by: Karjiban, Roghayeh Abedi
Published: (2008) -
Thermal behavioral analysis of bacillus stearothermophilus L1 lipase at elevated temperature by molecular dynamics simulation method
by: Abdul Rahman, Mohd Basyaruddin, et al.
Published: (2007) -
Effect of transition metal ion substitution on thermostable T1 lipase activity
by: Harun, Harmiza
Published: (2013) -
Thermostability of the Recombinant Haemagglutinin-Neuraminidase Glycoproteins of Newcastle Disease Virus
by: Tang, Yik Kiong
Published: (2003)