Association Genetics of the Cirmamyl Alcohol Dehydrogenase (CAD) and Cirmamate 4-hydroxylase (C4H) Genes with Basic Wood Density in Neolamarckia cadamba
Association genetics study is a powerful approach to detect the potential genetic variants (ie, SNPs) underlying the common and complex adaptive traits. Once the quantitative trait nucleotides are identified, such powerful approach provides significant advantages to the forest industry. Hence, attem...
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| Format: | Article |
| Language: | English |
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Asian Network for Scientific Information
2012
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| Online Access: | http://ir.unimas.my/id/eprint/7141/ http://ir.unimas.my/id/eprint/7141/1/Association%20Genetics%20of%20the%20Cirmamyl.pdf |
| _version_ | 1848836065256800256 |
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| author | SL, Pang J, Ismail BL, Tchin WS, Ho |
| author_facet | SL, Pang J, Ismail BL, Tchin WS, Ho |
| author_sort | SL, Pang |
| building | UNIMAS Institutional Repository |
| collection | Online Access |
| description | Association genetics study is a powerful approach to detect the potential genetic variants (ie, SNPs) underlying the common and complex adaptive traits. Once the quantitative trait nucleotides are identified, such powerful approach provides significant advantages to the forest industry. Hence, attempts were made to discover SNPs from Neolamarclcia cadamba partial C4H (3,538 bp) and CAD (2,354 bp) DNA sequences and further associate those SNPs with basic wood density. Overlapping primers were designed in flanking the partial C4H and CAD DNA frim 12 N.cadamba trees. The amplified DNA fragments were sequenced and the basic wood density measurements were determined for each tree. The sequence variation analyses revealed that there were 60 and 32 SNPs detected in the partial C4H and CAD DNA sequences, respectively. Those SNPs were distributed throughout the exon, intron, 5'-UTR and 3'-UTR regions. |
| first_indexed | 2025-11-15T06:17:50Z |
| format | Article |
| id | unimas-7141 |
| institution | Universiti Malaysia Sarawak |
| institution_category | Local University |
| language | English |
| last_indexed | 2025-11-15T06:17:50Z |
| publishDate | 2012 |
| publisher | Asian Network for Scientific Information |
| recordtype | eprints |
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| spelling | unimas-71412015-05-13T01:55:07Z http://ir.unimas.my/id/eprint/7141/ Association Genetics of the Cirmamyl Alcohol Dehydrogenase (CAD) and Cirmamate 4-hydroxylase (C4H) Genes with Basic Wood Density in Neolamarckia cadamba SL, Pang J, Ismail BL, Tchin WS, Ho QE Geology S Agriculture (General) SB Plant culture SD Forestry Association genetics study is a powerful approach to detect the potential genetic variants (ie, SNPs) underlying the common and complex adaptive traits. Once the quantitative trait nucleotides are identified, such powerful approach provides significant advantages to the forest industry. Hence, attempts were made to discover SNPs from Neolamarclcia cadamba partial C4H (3,538 bp) and CAD (2,354 bp) DNA sequences and further associate those SNPs with basic wood density. Overlapping primers were designed in flanking the partial C4H and CAD DNA frim 12 N.cadamba trees. The amplified DNA fragments were sequenced and the basic wood density measurements were determined for each tree. The sequence variation analyses revealed that there were 60 and 32 SNPs detected in the partial C4H and CAD DNA sequences, respectively. Those SNPs were distributed throughout the exon, intron, 5'-UTR and 3'-UTR regions. Asian Network for Scientific Information 2012 Article PeerReviewed text en http://ir.unimas.my/id/eprint/7141/1/Association%20Genetics%20of%20the%20Cirmamyl.pdf SL, Pang and J, Ismail and BL, Tchin and WS, Ho (2012) Association Genetics of the Cirmamyl Alcohol Dehydrogenase (CAD) and Cirmamate 4-hydroxylase (C4H) Genes with Basic Wood Density in Neolamarckia cadamba. Biotechnology, 11 (6). pp. 307-317. ISSN 1682-296X doi:10.3923/biotech.2012.307.317 |
| spellingShingle | QE Geology S Agriculture (General) SB Plant culture SD Forestry SL, Pang J, Ismail BL, Tchin WS, Ho Association Genetics of the Cirmamyl Alcohol Dehydrogenase (CAD) and Cirmamate 4-hydroxylase (C4H) Genes with Basic Wood Density in Neolamarckia cadamba |
| title | Association Genetics of the Cirmamyl Alcohol Dehydrogenase (CAD) and Cirmamate 4-hydroxylase (C4H) Genes with Basic Wood Density in Neolamarckia cadamba |
| title_full | Association Genetics of the Cirmamyl Alcohol Dehydrogenase (CAD) and Cirmamate 4-hydroxylase (C4H) Genes with Basic Wood Density in Neolamarckia cadamba |
| title_fullStr | Association Genetics of the Cirmamyl Alcohol Dehydrogenase (CAD) and Cirmamate 4-hydroxylase (C4H) Genes with Basic Wood Density in Neolamarckia cadamba |
| title_full_unstemmed | Association Genetics of the Cirmamyl Alcohol Dehydrogenase (CAD) and Cirmamate 4-hydroxylase (C4H) Genes with Basic Wood Density in Neolamarckia cadamba |
| title_short | Association Genetics of the Cirmamyl Alcohol Dehydrogenase (CAD) and Cirmamate 4-hydroxylase (C4H) Genes with Basic Wood Density in Neolamarckia cadamba |
| title_sort | association genetics of the cirmamyl alcohol dehydrogenase (cad) and cirmamate 4-hydroxylase (c4h) genes with basic wood density in neolamarckia cadamba |
| topic | QE Geology S Agriculture (General) SB Plant culture SD Forestry |
| url | http://ir.unimas.my/id/eprint/7141/ http://ir.unimas.my/id/eprint/7141/ http://ir.unimas.my/id/eprint/7141/1/Association%20Genetics%20of%20the%20Cirmamyl.pdf |