A Genus-and Species-Specific Nested Polymerase Chain Reaction Malaria Detection Assay For Epidemiologic Studies

A nested polymerase chain reaction (PCR) assay that uses Plasmodium genus-specific primers for the initial PCR (nest 1) amplification and either genus- or species-specific primers for the nest 2 amplifications was tested on laboratory and field samples. With in vitro cultured Plasmodium falciparum–...

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Main Authors: Balbir, Singh, Bobogare, Albino, Cox-Singh, J., Snounou, Georges, Mohammad Shukri, Abdullah, Hasan, Abdul Rahman
Format: Article
Language:English
Published: American Society of Tropical Medicine and Hygiene, American Society of Tropical Medicine and Hygiene 1999
Subjects:
Online Access:http://ir.unimas.my/id/eprint/15838/
http://ir.unimas.my/id/eprint/15838/1/A%20GENUS.pdf
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author Balbir, Singh
Bobogare, Albino
Cox-Singh, J.
Snounou, Georges
Mohammad Shukri, Abdullah
Hasan, Abdul Rahman
author_facet Balbir, Singh
Bobogare, Albino
Cox-Singh, J.
Snounou, Georges
Mohammad Shukri, Abdullah
Hasan, Abdul Rahman
author_sort Balbir, Singh
building UNIMAS Institutional Repository
collection Online Access
description A nested polymerase chain reaction (PCR) assay that uses Plasmodium genus-specific primers for the initial PCR (nest 1) amplification and either genus- or species-specific primers for the nest 2 amplifications was tested on laboratory and field samples. With in vitro cultured Plasmodium falciparum–infected blood samples, it was capable of detecting six parasites/ml of blood using DNA prepared from 25-ml blood spots on filter paper. The assay was evaluated on fingerprick blood samples collected on filter paper from 129 individuals living in a malaria-endemic area in Malaysia. Malaria prevalence by genus-specific nested PCR was 35.6% (46 of 129) compared with 28.7% (37 of 129) by microscopy. The nested PCR detected seven more malaria samples than microscopy in the first round of microscopic examination, malaria in three microscopically negative samples, six double infections identified as single infections by microscopy and one triple infection identified as a double infection by microscopy. The nested PCR assay described is a sensitive technique for collecting accurate malaria epidemiologic data. When coupled with simple blood spot sampling, it is particularly useful for screening communities in remote regions of the world.
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institution Universiti Malaysia Sarawak
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language English
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publishDate 1999
publisher American Society of Tropical Medicine and Hygiene, American Society of Tropical Medicine and Hygiene
recordtype eprints
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spelling unimas-158382022-01-19T01:22:47Z http://ir.unimas.my/id/eprint/15838/ A Genus-and Species-Specific Nested Polymerase Chain Reaction Malaria Detection Assay For Epidemiologic Studies Balbir, Singh Bobogare, Albino Cox-Singh, J. Snounou, Georges Mohammad Shukri, Abdullah Hasan, Abdul Rahman R Medicine (General) A nested polymerase chain reaction (PCR) assay that uses Plasmodium genus-specific primers for the initial PCR (nest 1) amplification and either genus- or species-specific primers for the nest 2 amplifications was tested on laboratory and field samples. With in vitro cultured Plasmodium falciparum–infected blood samples, it was capable of detecting six parasites/ml of blood using DNA prepared from 25-ml blood spots on filter paper. The assay was evaluated on fingerprick blood samples collected on filter paper from 129 individuals living in a malaria-endemic area in Malaysia. Malaria prevalence by genus-specific nested PCR was 35.6% (46 of 129) compared with 28.7% (37 of 129) by microscopy. The nested PCR detected seven more malaria samples than microscopy in the first round of microscopic examination, malaria in three microscopically negative samples, six double infections identified as single infections by microscopy and one triple infection identified as a double infection by microscopy. The nested PCR assay described is a sensitive technique for collecting accurate malaria epidemiologic data. When coupled with simple blood spot sampling, it is particularly useful for screening communities in remote regions of the world. American Society of Tropical Medicine and Hygiene, American Society of Tropical Medicine and Hygiene 1999 Article PeerReviewed text en http://ir.unimas.my/id/eprint/15838/1/A%20GENUS.pdf Balbir, Singh and Bobogare, Albino and Cox-Singh, J. and Snounou, Georges and Mohammad Shukri, Abdullah and Hasan, Abdul Rahman (1999) A Genus-and Species-Specific Nested Polymerase Chain Reaction Malaria Detection Assay For Epidemiologic Studies. The American journal of tropical medicine and hygiene, 60 (4). pp. 687-692. ISSN 0002-9637 https://www.researchgate.net/publication/12951123_A_Genus-_and_species-specific_nested_polymerase_chain_reaction_malaria_detection_assay_for_epidemiologic_studies
spellingShingle R Medicine (General)
Balbir, Singh
Bobogare, Albino
Cox-Singh, J.
Snounou, Georges
Mohammad Shukri, Abdullah
Hasan, Abdul Rahman
A Genus-and Species-Specific Nested Polymerase Chain Reaction Malaria Detection Assay For Epidemiologic Studies
title A Genus-and Species-Specific Nested Polymerase Chain Reaction Malaria Detection Assay For Epidemiologic Studies
title_full A Genus-and Species-Specific Nested Polymerase Chain Reaction Malaria Detection Assay For Epidemiologic Studies
title_fullStr A Genus-and Species-Specific Nested Polymerase Chain Reaction Malaria Detection Assay For Epidemiologic Studies
title_full_unstemmed A Genus-and Species-Specific Nested Polymerase Chain Reaction Malaria Detection Assay For Epidemiologic Studies
title_short A Genus-and Species-Specific Nested Polymerase Chain Reaction Malaria Detection Assay For Epidemiologic Studies
title_sort genus-and species-specific nested polymerase chain reaction malaria detection assay for epidemiologic studies
topic R Medicine (General)
url http://ir.unimas.my/id/eprint/15838/
http://ir.unimas.my/id/eprint/15838/
http://ir.unimas.my/id/eprint/15838/1/A%20GENUS.pdf