Molecular phylogeny of modern coxsackievirus A16
A phylogenetic analysis of VP1 and VP4 nucleotide sequences of 52 recent CVA16 strains demonstrated two distinct CVA16 genogroups, A and B, with the prototype strain being the only member of genogroup A. CVA16 G-10, the prototype strain, showed a nucleotide difference of 27.7–30.2% and 19.9–25...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Springer-Verlag
2007
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| Online Access: | http://ir.unimas.my/id/eprint/13623/ http://ir.unimas.my/id/eprint/13623/1/Molecular%20phylogeny%20of%20modern%20coxsackievirus%20A16%20%28abstract%29.pdf |
| _version_ | 1848837445862293504 |
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| author | David, Perera Yuwana, Podin Mong, How Ooi Ali, Zaki |
| author_facet | David, Perera Yuwana, Podin Mong, How Ooi Ali, Zaki |
| author_sort | David, Perera |
| building | UNIMAS Institutional Repository |
| collection | Online Access |
| description | A phylogenetic analysis of VP1 and VP4 nucleotide
sequences of 52 recent CVA16 strains demonstrated
two distinct CVA16 genogroups, A and B,
with the prototype strain being the only member
of genogroup A. CVA16 G-10, the prototype strain,
showed a nucleotide difference of 27.7–30.2% and
19.9–25.2% in VP1 and VP4, respectively, in relation
to other CVA16 strains, which formed two
separate lineages in genogroup B with nucleotide
variation of less than 13.4% and less than 16.3%
in VP1 and VP4, respectively. Lineage 1 strains
circulating before 2000 were later displaced by lineage
2 strains. |
| first_indexed | 2025-11-15T06:39:47Z |
| format | Article |
| id | unimas-13623 |
| institution | Universiti Malaysia Sarawak |
| institution_category | Local University |
| language | English |
| last_indexed | 2025-11-15T06:39:47Z |
| publishDate | 2007 |
| publisher | Springer-Verlag |
| recordtype | eprints |
| repository_type | Digital Repository |
| spelling | unimas-136232016-09-26T23:14:00Z http://ir.unimas.my/id/eprint/13623/ Molecular phylogeny of modern coxsackievirus A16 David, Perera Yuwana, Podin Mong, How Ooi Ali, Zaki RA0421 Public health. Hygiene. Preventive Medicine A phylogenetic analysis of VP1 and VP4 nucleotide sequences of 52 recent CVA16 strains demonstrated two distinct CVA16 genogroups, A and B, with the prototype strain being the only member of genogroup A. CVA16 G-10, the prototype strain, showed a nucleotide difference of 27.7–30.2% and 19.9–25.2% in VP1 and VP4, respectively, in relation to other CVA16 strains, which formed two separate lineages in genogroup B with nucleotide variation of less than 13.4% and less than 16.3% in VP1 and VP4, respectively. Lineage 1 strains circulating before 2000 were later displaced by lineage 2 strains. Springer-Verlag 2007 Article PeerReviewed text en http://ir.unimas.my/id/eprint/13623/1/Molecular%20phylogeny%20of%20modern%20coxsackievirus%20A16%20%28abstract%29.pdf David, Perera and Yuwana, Podin and Mong, How Ooi and Ali, Zaki (2007) Molecular phylogeny of modern coxsackievirus A16. Archives of Virology, 152 (6). pp. 1201-1208. ISSN 1432-8798 http://link.springer.com/article/10.1007/s00705-006-0934-5 doi:10.1007/s00705-006-0934-5 |
| spellingShingle | RA0421 Public health. Hygiene. Preventive Medicine David, Perera Yuwana, Podin Mong, How Ooi Ali, Zaki Molecular phylogeny of modern coxsackievirus A16 |
| title | Molecular phylogeny of modern coxsackievirus A16 |
| title_full | Molecular phylogeny of modern coxsackievirus A16 |
| title_fullStr | Molecular phylogeny of modern coxsackievirus A16 |
| title_full_unstemmed | Molecular phylogeny of modern coxsackievirus A16 |
| title_short | Molecular phylogeny of modern coxsackievirus A16 |
| title_sort | molecular phylogeny of modern coxsackievirus a16 |
| topic | RA0421 Public health. Hygiene. Preventive Medicine |
| url | http://ir.unimas.my/id/eprint/13623/ http://ir.unimas.my/id/eprint/13623/ http://ir.unimas.my/id/eprint/13623/ http://ir.unimas.my/id/eprint/13623/1/Molecular%20phylogeny%20of%20modern%20coxsackievirus%20A16%20%28abstract%29.pdf |