Spatial distribution of toxic Alexandrium tamiyavanichii (Dinophyceae) in the southeastern South China Sea-Sulu Sea: A molecular-based assessment using real-time quantitative PCR (qPCR) assay

QR Code

Spatial distribution of toxic Alexandrium tamiyavanichii (Dinophyceae) in the southeastern South China Sea-Sulu Sea: A molecular-based assessment using real-time quantitative PCR (qPCR) assay

In this study, a quantitative real-time PCR (qPCR) assay targeting the second internal transcribed spacer (ITS2) of the nuclear-encoded ribosomal RNA gene (rDNA) was developed for Alexandrium tamiyavanichii, a harmful tropical marine dinoflagellate. This species is of concern because it produces tox...

Full description

Bibliographic Details
Main Authors:	Nyuk, Fong Kon, Sing, Tung Teng, Kieng, Soon Hii, Leh, Hie Yek, Aazani, Mujahid
Format:	Article
Language:	English
Published:	Elsevier Ltd. 2015
Subjects:	SH Aquaculture. Fisheries. Angling
Online Access:	http://ir.unimas.my/id/eprint/10734/ http://ir.unimas.my/id/eprint/10734/1/NO%20116%20Spatial%20distribution%20of%20toxic%20Alexandrium%20tamiyavanichii%20%28Dinophyceae%29%20in%20the%20southeastern%20South%20China%20Sea-Sulu%20Sea%20%28abstract%29.pdf

Similar Items

First Record of Marine Dinoflagellate, Alexandrium Tamutum (Dinophyceae) from Malaysia
by: Kon, Nyuk Fong, et al.
Published: (2013)

Solving the phylogeny of toxic dinoflagellates, alexandrium halim (Dinophyceae)
by: Hii, Kieng Soon.
Published: (2010)

Rapid detection of toxic dinoflagellate, alexandrium minutum (dinophyceae) using whole-cell fluorescence in situ hybridization (fish)
by: Yek, Leh Hie
Published: (2012)

Phylogenetic relationship of Alexandrium tamiyavanichii (Dinophyceae) to other Alexandrium species based on ribosomal RNA gene sequences
by: Usup, G., et al.
Published: (2002)

Characterization of the Saxitoxin Biosynthetic Starting Gene, sxta in the Toxic Dinoflagellate Alexandrium tamiyavanichii
by: Kieng, Soon Hii, et al.
Published: (2012)

Effects of light and temperature on growth, nitrate uptake, and Toxin production of two tropical dinoflagellates: alexandrium Tamiyavanichii and alexandrium minutum (dinophyceae)
by: Po, T.L, et al.
Published: (2006)

qPCR analysis of quorum sensing genes of pseudomonas aeruginosa: Primer design and qPCR efficiency
by: Saiedatul Akmal, Mohamed Sedek, et al.
Published: (2023)

The life cycle of two paralytic shellfish toxin producing dinoflagellates, Alexandrium minutum and Alexandrium tamiyavanichii (Dinophyceae) in Malaysia / Liow Guat Ru
by: Liow , Guat Ru
Published: (2017)

Molecular characterization of the its2 transcript and saxitoxin biosynthetic genes in two toxic dinoflagellates, alexandrium (dinophyceae) from Malaysia
by: Hii, Kieng Soon
Published: (2012)

On-site rapid detection of toxic Alexandrium tamiyavanichii: integrating the species-specific hydrolysis probe in insulated isothermal polymerase chain reaction (iiPCR)
by: Nyuk, Fong Kon, et al.
Published: (2016)

Quantitative real-time PCR detection of a harmful unarmoured dinoflagellate, Karlodinium australe (Dinophyceae)
by: Nyuk, Fong Kon, et al.
Published: (2017)

Toxicity profiles between strains of Alexandrium Tamiyavanichii
by: Muhamad Bunnori, Noraslinda, et al.
Published: (2018)

Toxicity profiles between strains of Alexandrium tamiyavanichii
by: Hamdan, Nurul Ashima, et al.
Published: (2016)

Mitigation of toxic alexandrium tamiyavanichii using chitosan-silica composite = Mitigasi alexandrium tamiyavanichii bertoksik menggunakan komposit kitosan-silika
by: Iqbal, Anwar, et al.
Published: (2019)

Alexandrium (Dinophyceae) species in Malaysian waters
by: Usup, G., et al.
Published: (2002)

First report of Alexandrium taylori and Alexandrium peruvianum (Dinophyceae) in Malaysia waters
by: Po, T.L, et al.
Published: (2005)

Salinity effect on growth of three dinoflagelltaes, protoceratium reticulatum, alexandrium tamiyavanichii and alexandrium tamutum
by: Nurul Zainab, Binti Along
Published: (2012)

Abundance of Alexandrium spesies (dinophyceae) in Kuching Estuaries
by: Tuan Zuraida, binti Tuan Hussin
Published: (2012)

Proteomics profiling of crassostrea iredalei exposed to toxic alexandrium tamiyavanichii and non-toxic alexandrium leei
by: Hamdan, Nurul Ashima, et al.
Published: (2017)

Design and development of multiplex real-time pcr (qPCR) for detection of streptococcus pneumoniae, klebsiella pneumoniae and haemophilus influenzae
by: Zahari, Nurul Izzaty Najwa
Published: (2024)

Phytoplankton community changes in Kuantan Port (Malaysia), with emphasis on the paralytic-shellfish toxin-producing dinoflagellate Alexandrium tamiyavanichii
by: Liow, Guat R., et al.
Published: (2019)

Isolation and selection of reference genes for Ganoderma boninense gene expression study using quantitative real-time PCR (qPCR)
by: Lim, Fook Hwa, et al.
Published: (2014)

Occurrence Of Three Alexandrium Species, A. Affine, A. Tamutum And A. Tamiyavanichii In Kuching Waters
by: Hii, KS, et al.
Published: (2012)

Optimization of qPCR assay of chicken cytokine genes using sybr green method
by: Chan, Jia Hui
Published: (2015)

Development of thermostable multiplex qPCR for simultaneous detection of pathogens associated with febrile illnesses
by: Ali, Mohammad Ridhuan Mohd
Published: (2018)

Identification of Alexandrium Halim (Dinophyceae) using EPI-fluorescence microscopy
by: Po, T.L, et al.
Published: (2003)

Biological control of Leptosphaeria maculans on Brassica napus and quantification of the microbes in planta using qPCR
by: Cholerton, Linda Jane
Published: (2015)

A bloom of Karlodinium australe (Gymnodiniales, Dinophyceae) associated with mass mortality of cage-cultured fishes in West Johor Strait, Malaysia
by: Hong, Chang Lim, et al.
Published: (2014)

Distribution of recent ostracoda in offshore Sediment of selected stations in the Sulu Sea, Sabah
by: Noraswana, N.F., et al.
Published: (2014)

DNA-Based Faecal Dietary Analysis: A Comparison of qPCR and High Throughput Sequencing Approaches
by: Murray, D., et al.
Published: (2011)

Detection of tuberculosis (TB) using gold standard method, direct sputum smears microscopy, PCR, qPCR and electrochemical DNA sensor: a mini review
by: Che-Engku-Chik, Che Engku Noramalina, et al.
Published: (2016)

Application of soil flocculation in removal of toxic alexandrium minutum and protoceratium reticulatum (Dinophyceae)
by: Tang, Clare Siing Nga
Published: (2011)

Salinity effect on growth and toxin production of four tropical Alexandrium species (Dinophyceae)
by: Lim, Po Teen, et al.
Published: (2005)

The potential of dried and fresh extracts of Sansevieria trifasciata to mitigate Alexandrium tamiyavanichii, a toxic dinoflagellate
by: Mohammad Noor, Normawaty, et al.
Published: (2018)

Responses of intertidal invertebrates to rising sea surface temperatures in the southeastern Indian Ocean
by: Wells, Fred, et al.
Published: (2023)

Mitigation of Alexandrium tamiyavanichii using active fractions from ethanol extract of ornamental plant, Sansevieria trifasciata
by: Mohammad Noor, Normawaty, et al.
Published: (2020)

Identification of oil palm root-specific genes through mining of RNA-Seq data and RT-qPCR analysis
by: Subhi, Siti Masura, et al.
Published: (2021)

Expression analysis using reverse transcription quantitative Real-Time PCR (RT-qPCR) suggests different strategies in Parageobacillus caldoxylosilyticus ER4B under exposure to cold shock
by: Ching, Xin Jie, et al.
Published: (2022)

Expression analysis using reverse transcription quantitative Real-Time PCR (RT-qPCR) suggests different strategies in Parageobacillus caldoxylosilyticus ER4B under exposure to cold shock
by: Jie, Ching Xin, et al.
Published: (2022)

Distributions of extractable organic compounds in airborne paraticulate matter over the straits of Malacca, South China Sea and Sulu-sulawesi Seas / Aliaa Diyana Azizuddin
by: Aliaa Diyana, Azizuddin
Published: (2011)