A hybrid of Cuckoo Search and Minimization of Metabolic Adjustment to optimize metabolites production in genome-scale models
Metabolic engineering involves the modification and alteration of metabolic pathways to improve the production of desired substance. The modification can be made using in silicogene knockout simulation that is able to predict and analyse the disrupted genes which may enhance the metabolites producti...
| Main Authors: | Muhammad Azharuddin, Arif, Mohd Saberi, Mohamad, Muhammad Shafie, Abd Latif, Safaai, Deris, Muhammad Akmal, Remli, Kauthar, Mohd Daud, Zuwairie, Ibrahim, Omatu, Sigeru, Corchado, Juan Manuel |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Elsevier Ltd
2018
|
| Subjects: | |
| Online Access: | http://umpir.ump.edu.my/id/eprint/22302/ http://umpir.ump.edu.my/id/eprint/22302/1/A%20hybrid%20of%20Cuckoo%20Search%20and%20Minimization%20of%20Metabolic%20Adjustment%20to%20optimize%20metabolites%20production%20in%20genome.pdf |
Similar Items
A Hybrid of Harmony Search and Minimization of Metabolic Adjustment for Optimization of Succinic Acid Production
by: Nor Syahirah, Abdul Wahid, et al.
Published: (2016)
by: Nor Syahirah, Abdul Wahid, et al.
Published: (2016)
Cooperative enhanced scatter search with opposition-based learning schemes for parameter estimation in high dimensional kinetic models of biological systems
by: Muhammad Akmal, Remli, et al.
Published: (2019)
by: Muhammad Akmal, Remli, et al.
Published: (2019)
An Improved gSVM-SCADL2 with Firefly Algorithm for Identification of Informative Genes and Pathways
by: Chan, Weng Howe, et al.
Published: (2016)
by: Chan, Weng Howe, et al.
Published: (2016)
Parameter estimation of essential amino acids in Arabidopsis thaliana using hybrid of bees algorithm and harmony search
by: Aw, Mei Yee, et al.
Published: (2019)
by: Aw, Mei Yee, et al.
Published: (2019)
A hybrid of particle swarm optimization and minimization of metabolic adjustment for ethanol production of escherichia coli
by: Lee, Mee K., et al.
Published: (2020)
by: Lee, Mee K., et al.
Published: (2020)
Gene subset selection for lung cancer classification using a multi-objective strategy
by: Mohamad, Mohd. Saberi, et al.
Published: (2008)
by: Mohamad, Mohd. Saberi, et al.
Published: (2008)
Selecting informative genes of lung cancers by a combination of hybrid methods
by: Mohamad, Mohd. Saberi, et al.
Published: (2008)
by: Mohamad, Mohd. Saberi, et al.
Published: (2008)
A two-stage method for identifying a smaller subset of genes in microarray data
by: Mohamad, Mohd. Saberi, et al.
Published: (2008)
by: Mohamad, Mohd. Saberi, et al.
Published: (2008)
An enhancement of binary particle swarm optimization for gene selection in classifying cancer classes
by: Mohd Saberi, Mohamad, et al.
Published: (2013)
by: Mohd Saberi, Mohamad, et al.
Published: (2013)
In silico gene knockout prediction using a hybrid of Bat algorithm and minimization of metabolic adjustment
by: Man, Mei Yen, et al.
Published: (2021)
by: Man, Mei Yen, et al.
Published: (2021)
Selecting a smaller subset of informative genes from microarray data via a three-stage method
by: Mohamad, Mohd. Saberi, et al.
Published: (2008)
by: Mohamad, Mohd. Saberi, et al.
Published: (2008)
Exploring the High Performance Computing-Enablement of a Suite of Gene-Knockout Based Genetic Engineering Applications
by: Li, Zhenya, et al.
Published: (2016)
by: Li, Zhenya, et al.
Published: (2016)
A model for gene selection and classification of gene expression data
by: Mohamad, Mohd Saberi, et al.
Published: (2007)
by: Mohamad, Mohd Saberi, et al.
Published: (2007)
A new binary particle swarm optimizer to select a smaller subset of genes for leukaemia cancer classification
by: Mohamad, Mohd. Saberi, et al.
Published: (2008)
by: Mohamad, Mohd. Saberi, et al.
Published: (2008)
A hybrid of Simple Constrained artificial bee colony algorithm and flux balance analysis for enhancing Lactate and Succinate in Escherichia Coli
by: Hon, Mei Kie, et al.
Published: (2018)
by: Hon, Mei Kie, et al.
Published: (2018)
Optimising the production of succinate and lactate in Escherichia coli using a hybrid of artificial bee colony algorithm and minimisation of metabolic adjustment
by: Tang, Phooi Wah, et al.
Published: (2015)
by: Tang, Phooi Wah, et al.
Published: (2015)
Identifying a Gene Knockout Strategy Using a Hybrid of Simple Constrained Artificial Bee Colony Algorithm and Flux Balance Analysis to Enhance the Production of Succinate and Lactate in Escherichia Coli
by: Mei, Kie Hon, et al.
Published: (2019)
by: Mei, Kie Hon, et al.
Published: (2019)
A Review on Metabolic Pathway Analysis in Biological Production
by: Lim, Sim Yi, et al.
Published: (2015)
by: Lim, Sim Yi, et al.
Published: (2015)
A Newton Cooperative Genetic Algorithm Method for In Silico Optimization of Metabolic Pathway Production
by: Mohd Arfian, Ismail, et al.
Published: (2015)
by: Mohd Arfian, Ismail, et al.
Published: (2015)
Normalization of metabolites in heterogenous systems using genomics
by: Solomon, P., et al.
Published: (2006)
by: Solomon, P., et al.
Published: (2006)
An improved scatter search algorithm for parameter estimation in large-scale kinetic models of biochemical systems
by: Remli, Muhammad Akmal, et al.
Published: (2019)
by: Remli, Muhammad Akmal, et al.
Published: (2019)
A review of computational methods for clustering genes with similar biological functions
by: Nies, Hui Wen, et al.
Published: (2019)
by: Nies, Hui Wen, et al.
Published: (2019)
An Improved Scatter Search Algorithm for Parameter Estimation in Large-Scale Kinetic Models of Biochemical Systems
by: Muhammad Akmal, Remli, et al.
Published: (2019)
by: Muhammad Akmal, Remli, et al.
Published: (2019)
Comparison of optimization-modelling methods for metabolites production in escherichia coli
by: Lee, M. K., et al.
Published: (2020)
by: Lee, M. K., et al.
Published: (2020)
Enhancing the cuckoo search with levy flight through population estimation
by: Mohd Nawi, Nazri, et al.
Published: (2016)
by: Mohd Nawi, Nazri, et al.
Published: (2016)
Metaheuristic optimization for parameter estimation in kinetic models of biological systems - recent development and future direction
by: Remli, Muhammad Akmal, et al.
Published: (2017)
by: Remli, Muhammad Akmal, et al.
Published: (2017)
Investigation of the Effects of Imputation Methods for Gene Regulatory Networks Modelling Using Dynamic Bayesian Networks
by: Sin, Yi Lim, et al.
Published: (2016)
by: Sin, Yi Lim, et al.
Published: (2016)
Neural networks for web news classification based on augmented PCA
by: Selamat, Ali, et al.
Published: (2003)
by: Selamat, Ali, et al.
Published: (2003)
Fuzzy logic control
by: Khalid, Marzuki, et al.
Published: (1993)
by: Khalid, Marzuki, et al.
Published: (1993)
Genomic study of Photobacterium marinum strain J15 and development of genome scale metabolic model for cellular metabolism identification
by: Roslan, Noordiyanah Nadhirah
Published: (2017)
by: Roslan, Noordiyanah Nadhirah
Published: (2017)
Genome-scale metabolic modelling of Clostridium autoethanogenum
by: Norman, Rupert O.J.
Published: (2019)
by: Norman, Rupert O.J.
Published: (2019)
A Hybrid of Particle Swarm Optimization and Harmony Search to Estimate Kinetic Parameters in Arabidopsis thaliana
by: Mohamad Saufie, Rosle, et al.
Published: (2020)
by: Mohamad Saufie, Rosle, et al.
Published: (2020)
Power distribution loss reduction using Cuckoo search
by: Ahmad Fuad, Nursyaza Afida, et al.
Published: (2018)
by: Ahmad Fuad, Nursyaza Afida, et al.
Published: (2018)
Improved cuckoo search for loss allocation in transmission line
by: Abdul Rahman, Nur Atiqah, et al.
Published: (2017)
by: Abdul Rahman, Nur Atiqah, et al.
Published: (2017)
Tuning of Cuckoo Search Based Strategy for T-Way Testing
by: Abdullah, Nasser, et al.
Published: (2015)
by: Abdullah, Nasser, et al.
Published: (2015)
Loss Minimisation by Optimal Reactive Power Dispatch Using
Cuckoo Search Algorithm
by: M. H., Sulaiman, et al.
Published: (2014)
by: M. H., Sulaiman, et al.
Published: (2014)
An Application of Cuckoo Search Algorithm for Solving Optimal Chiller Loading Problem for Energy Conservation
by: M. H., Sulaiman, et al.
Published: (2014)
by: M. H., Sulaiman, et al.
Published: (2014)
Optimization of neural network using cuckoo search for the classification of diabetes
by: Abubakar, Adamu, et al.
Published: (2015)
by: Abubakar, Adamu, et al.
Published: (2015)
Implementation evaluation of Cuckoo search for the benchmark Rosenbrock test function
by: Odili, Julius Beneoluchi, et al.
Published: (2017)
by: Odili, Julius Beneoluchi, et al.
Published: (2017)
Solving Economic Dispatch Problems Utilizing Cuckoo Search Algorithm
by: M. H., Sulaiman, et al.
Published: (2014)
by: M. H., Sulaiman, et al.
Published: (2014)
Similar Items
-
A Hybrid of Harmony Search and Minimization of Metabolic Adjustment for Optimization of Succinic Acid Production
by: Nor Syahirah, Abdul Wahid, et al.
Published: (2016) -
Cooperative enhanced scatter search with opposition-based learning schemes for parameter estimation in high dimensional kinetic models of biological systems
by: Muhammad Akmal, Remli, et al.
Published: (2019) -
An Improved gSVM-SCADL2 with Firefly Algorithm for Identification of Informative Genes and Pathways
by: Chan, Weng Howe, et al.
Published: (2016) -
Parameter estimation of essential amino acids in Arabidopsis thaliana using hybrid of bees algorithm and harmony search
by: Aw, Mei Yee, et al.
Published: (2019) -
A hybrid of particle swarm optimization and minimization of metabolic adjustment for ethanol production of escherichia coli
by: Lee, Mee K., et al.
Published: (2020)