Copy Number Variation of FCGR3B on Negrito-Mendriq / Mohd Helmy Yusof, Umi Shakina Haridan and Muhamad Rahimi Che Hassan

Fc Gamma Receptor 3B (FcγRIIIB, encoded by the gene FCGR3B) plays a crucial role in immunity response activated by cellular effectors and regulatory functions. Copy number variation (CNV) of this gene has been previously reported to affect susceptibility to several diseases such as autoimmune disea...

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Main Authors: Yusof, Mohd Helmy, Haridan, Umi Shakina, Che Hassan, Muhamad Rahimi
Format: Article
Language:English
Published: Universiti Teknologi MARA, Negeri Sembilan 2019
Subjects:
Online Access:https://ir.uitm.edu.my/id/eprint/30590/
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author Yusof, Mohd Helmy
Haridan, Umi Shakina
Che Hassan, Muhamad Rahimi
author_facet Yusof, Mohd Helmy
Haridan, Umi Shakina
Che Hassan, Muhamad Rahimi
author_sort Yusof, Mohd Helmy
building UiTM Institutional Repository
collection Online Access
description Fc Gamma Receptor 3B (FcγRIIIB, encoded by the gene FCGR3B) plays a crucial role in immunity response activated by cellular effectors and regulatory functions. Copy number variation (CNV) of this gene has been previously reported to affect susceptibility to several diseases such as autoimmune diseases and chronic inflammatory response. One of the rarest and smallest tribes of Orang Asli which is Negrito-Mendriq sample was used as a subject in this study. Twenty-two (22) Lymphoblastoid cell lines (LCLs) of Negrito-Mendriq was obtained from the deposited cell archive, Institute Medical Molecular Biotechnology, IMMB (UiTM Sg Buloh, Selangor, Malaysia) and the LCLs were revived. The DNA was extracted from the LCL and finally PRT – REDVR assay was carried for FCGR3B copy number genotyping. Analysis revealed that copy number 2 demonstrated the highest distribution for FCGR3B (90.9%); whilst no copy number loss was found for FCGR3B. For high copy number (>2), 9.1% was obtained. Copy number greater than 3 (>3) was not found in this study. Finally, it was concluded that no significant difference of CNV of FCGR3B for Orang Asli Negrito-Mendriq when compared with the reported studies. CNV of FCGR3B genes of Negrito-Mendriq was found normal in this study, where the pattern of copy number distribution was almost similar with previously reported studies.
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spelling uitm-305902020-06-01T01:59:34Z https://ir.uitm.edu.my/id/eprint/30590/ Copy Number Variation of FCGR3B on Negrito-Mendriq / Mohd Helmy Yusof, Umi Shakina Haridan and Muhamad Rahimi Che Hassan joa Yusof, Mohd Helmy Haridan, Umi Shakina Che Hassan, Muhamad Rahimi Genetics Human genetics Fc Gamma Receptor 3B (FcγRIIIB, encoded by the gene FCGR3B) plays a crucial role in immunity response activated by cellular effectors and regulatory functions. Copy number variation (CNV) of this gene has been previously reported to affect susceptibility to several diseases such as autoimmune diseases and chronic inflammatory response. One of the rarest and smallest tribes of Orang Asli which is Negrito-Mendriq sample was used as a subject in this study. Twenty-two (22) Lymphoblastoid cell lines (LCLs) of Negrito-Mendriq was obtained from the deposited cell archive, Institute Medical Molecular Biotechnology, IMMB (UiTM Sg Buloh, Selangor, Malaysia) and the LCLs were revived. The DNA was extracted from the LCL and finally PRT – REDVR assay was carried for FCGR3B copy number genotyping. Analysis revealed that copy number 2 demonstrated the highest distribution for FCGR3B (90.9%); whilst no copy number loss was found for FCGR3B. For high copy number (>2), 9.1% was obtained. Copy number greater than 3 (>3) was not found in this study. Finally, it was concluded that no significant difference of CNV of FCGR3B for Orang Asli Negrito-Mendriq when compared with the reported studies. CNV of FCGR3B genes of Negrito-Mendriq was found normal in this study, where the pattern of copy number distribution was almost similar with previously reported studies. Universiti Teknologi MARA, Negeri Sembilan 2019 Article PeerReviewed text en https://ir.uitm.edu.my/id/eprint/30590/1/30590.pdf Yusof, Mohd Helmy and Haridan, Umi Shakina and Che Hassan, Muhamad Rahimi (2019) Copy Number Variation of FCGR3B on Negrito-Mendriq / Mohd Helmy Yusof, Umi Shakina Haridan and Muhamad Rahimi Che Hassan. (2019) Journal of Academia <https://ir.uitm.edu.my/view/publication/Journal_of_Academia.html>, 7 (2). pp. 67-75. ISSN 2289-6368 https://nsembilan.uitm.edu.my/joacns/
spellingShingle Genetics
Human genetics
Yusof, Mohd Helmy
Haridan, Umi Shakina
Che Hassan, Muhamad Rahimi
Copy Number Variation of FCGR3B on Negrito-Mendriq / Mohd Helmy Yusof, Umi Shakina Haridan and Muhamad Rahimi Che Hassan
title Copy Number Variation of FCGR3B on Negrito-Mendriq / Mohd Helmy Yusof, Umi Shakina Haridan and Muhamad Rahimi Che Hassan
title_full Copy Number Variation of FCGR3B on Negrito-Mendriq / Mohd Helmy Yusof, Umi Shakina Haridan and Muhamad Rahimi Che Hassan
title_fullStr Copy Number Variation of FCGR3B on Negrito-Mendriq / Mohd Helmy Yusof, Umi Shakina Haridan and Muhamad Rahimi Che Hassan
title_full_unstemmed Copy Number Variation of FCGR3B on Negrito-Mendriq / Mohd Helmy Yusof, Umi Shakina Haridan and Muhamad Rahimi Che Hassan
title_short Copy Number Variation of FCGR3B on Negrito-Mendriq / Mohd Helmy Yusof, Umi Shakina Haridan and Muhamad Rahimi Che Hassan
title_sort copy number variation of fcgr3b on negrito-mendriq / mohd helmy yusof, umi shakina haridan and muhamad rahimi che hassan
topic Genetics
Human genetics
url https://ir.uitm.edu.my/id/eprint/30590/
https://ir.uitm.edu.my/id/eprint/30590/