Molecular docking unveils prospective inhibitors for the SARS-COV-2 main protease

The recent emergence of a novel coronavirus strain (SARS-CoV-2) has stimulated global efforts to identify potential drugs that target proteins expressed by this novel coronavirus. Among these, the main protease of SARS-CoV-2 (3CL-protease (3CLPro), also known as (MPro) is one of the best choices f...

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Main Authors: Ahmad, Fawad, Ikram, Saima, Ahmad, Jamshaid, ur Rehman, Irshad, Khattak, Saeed Ullah, Butt, Sadia, Mushtaq, Maryam
Format: Article
Language:English
Published: Penerbit Universiti Kebangsaan Malaysia 2021
Online Access:http://journalarticle.ukm.my/17423/
http://journalarticle.ukm.my/17423/1/26.pdf
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author Ahmad, Fawad
Ikram, Saima
Ahmad, Jamshaid
ur Rehman, Irshad
Khattak, Saeed Ullah
Butt, Sadia
Mushtaq, Maryam
author_facet Ahmad, Fawad
Ikram, Saima
Ahmad, Jamshaid
ur Rehman, Irshad
Khattak, Saeed Ullah
Butt, Sadia
Mushtaq, Maryam
author_sort Ahmad, Fawad
building UKM Institutional Repository
collection Online Access
description The recent emergence of a novel coronavirus strain (SARS-CoV-2) has stimulated global efforts to identify potential drugs that target proteins expressed by this novel coronavirus. Among these, the main protease of SARS-CoV-2 (3CL-protease (3CLPro), also known as (MPro) is one of the best choices for the scientists to target. 3CLPro is involved in the processing of polyproteins into mature non-structural viral proteins. An X-ray crystallographic structure (PDB ID 6LU7) of this protein was obtained from the PDB database. ChemDiv libraries of ~80,000 antiviral and ~13,000 coronavirus-targeting molecules were screened against the 3D structure of 3CLPro of SARS-CoV-2. We have identified a panel of molecules that showed an activity and potentially block the active site of the SARS-CoV-2 main protease. These molecules can be investigated further to develop effective virus-inhibiting molecules to treat this highly distressing disease, causing extreme unrest across the globe.
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spelling oai:generic.eprints.org:174232021-09-14T03:17:07Z http://journalarticle.ukm.my/17423/ Molecular docking unveils prospective inhibitors for the SARS-COV-2 main protease Ahmad, Fawad Ikram, Saima Ahmad, Jamshaid ur Rehman, Irshad Khattak, Saeed Ullah Butt, Sadia Mushtaq, Maryam The recent emergence of a novel coronavirus strain (SARS-CoV-2) has stimulated global efforts to identify potential drugs that target proteins expressed by this novel coronavirus. Among these, the main protease of SARS-CoV-2 (3CL-protease (3CLPro), also known as (MPro) is one of the best choices for the scientists to target. 3CLPro is involved in the processing of polyproteins into mature non-structural viral proteins. An X-ray crystallographic structure (PDB ID 6LU7) of this protein was obtained from the PDB database. ChemDiv libraries of ~80,000 antiviral and ~13,000 coronavirus-targeting molecules were screened against the 3D structure of 3CLPro of SARS-CoV-2. We have identified a panel of molecules that showed an activity and potentially block the active site of the SARS-CoV-2 main protease. These molecules can be investigated further to develop effective virus-inhibiting molecules to treat this highly distressing disease, causing extreme unrest across the globe. Penerbit Universiti Kebangsaan Malaysia 2021-05 Article PeerReviewed application/pdf en http://journalarticle.ukm.my/17423/1/26.pdf Ahmad, Fawad and Ikram, Saima and Ahmad, Jamshaid and ur Rehman, Irshad and Khattak, Saeed Ullah and Butt, Sadia and Mushtaq, Maryam (2021) Molecular docking unveils prospective inhibitors for the SARS-COV-2 main protease. Sains Malaysiana, 50 (5). pp. 1473-1484. ISSN 0126-6039 https://www.ukm.my/jsm/malay_journals/jilid50bil5_2021/KandunganJilid50Bil5_2021.html
spellingShingle Ahmad, Fawad
Ikram, Saima
Ahmad, Jamshaid
ur Rehman, Irshad
Khattak, Saeed Ullah
Butt, Sadia
Mushtaq, Maryam
Molecular docking unveils prospective inhibitors for the SARS-COV-2 main protease
title Molecular docking unveils prospective inhibitors for the SARS-COV-2 main protease
title_full Molecular docking unveils prospective inhibitors for the SARS-COV-2 main protease
title_fullStr Molecular docking unveils prospective inhibitors for the SARS-COV-2 main protease
title_full_unstemmed Molecular docking unveils prospective inhibitors for the SARS-COV-2 main protease
title_short Molecular docking unveils prospective inhibitors for the SARS-COV-2 main protease
title_sort molecular docking unveils prospective inhibitors for the sars-cov-2 main protease
url http://journalarticle.ukm.my/17423/
http://journalarticle.ukm.my/17423/
http://journalarticle.ukm.my/17423/1/26.pdf