Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit

Background: The clinical manifestations of Group A streptococcus (GAS) – (Streptococcus pyogenes) are diverse, ranging from asymptomatic colonisation to devastating invasive disease. Maternity related clusters of invasive Group A streptococcus (iGAS) infection are complex to investigate and control...

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Main Authors: Dickinson, Harriet, Reacher, Mark, Nazareth, Bernadette, Eagle, Heidi, Fowler, Deirdre, Underwood, Anthony, Chand, Meera, Chalker, Victoria, Coelho, Juliana, Daniel, Roger, Kapatai, Georgia, Al-Shabib, Ali, Puleston, Richard
Format: Article
Language:English
Published: Elsevier 2018
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Online Access:https://eprints.nottingham.ac.uk/51180/
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author Dickinson, Harriet
Reacher, Mark
Nazareth, Bernadette
Eagle, Heidi
Fowler, Deirdre
Underwood, Anthony
Chand, Meera
Chalker, Victoria
Coelho, Juliana
Daniel, Roger
Kapatai, Georgia
Al-Shabib, Ali
Puleston, Richard
author_facet Dickinson, Harriet
Reacher, Mark
Nazareth, Bernadette
Eagle, Heidi
Fowler, Deirdre
Underwood, Anthony
Chand, Meera
Chalker, Victoria
Coelho, Juliana
Daniel, Roger
Kapatai, Georgia
Al-Shabib, Ali
Puleston, Richard
author_sort Dickinson, Harriet
building Nottingham Research Data Repository
collection Online Access
description Background: The clinical manifestations of Group A streptococcus (GAS) – (Streptococcus pyogenes) are diverse, ranging from asymptomatic colonisation to devastating invasive disease. Maternity related clusters of invasive Group A streptococcus (iGAS) infection are complex to investigate and control, especially if recurrent. Aim: We report on the investigation into three episodes of emm 75 GAS/iGAS infection in maternity patients at one hospital site over a 4 year period, two with monophyletic ancestry. Methods: The episodes are described, together with whole genome sequence isolate analyses. Single nucleotide polymorphism differences were compared with contemporaneous emm 75 genomes. Findings: Seven mothers had GAS/iGAS in over a 4 year period, emm 75, S.pyogenes and one had iGAS (in year 4) emm 3, S.pyogenes (subsequently discounted as linked). Three (clinical/screening samples) of the seven babies of emm 75 positive mothers and 3 screened healthcare workers were positive for GAS emm 75. Whole genome sequence similarity suggests a shared ancestral lineage and suggested a common source transmission but directionality of transmission cannot be inferred. However the findings indicate that persistence of a particular clone in a given setting may be long-term. Conclusions: Occupational health procedures were enhanced, staff were screened and antibiotic therapy provided to GAS positive staff and patients. The definitive source of infection could not be identified, although staff/patient transmission is the most likely route. The pattern of clonal GAS transmission over 4 years suggests long-term persistence of GAS may have occurred.
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spelling nottingham-511802019-03-22T04:30:18Z https://eprints.nottingham.ac.uk/51180/ Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit Dickinson, Harriet Reacher, Mark Nazareth, Bernadette Eagle, Heidi Fowler, Deirdre Underwood, Anthony Chand, Meera Chalker, Victoria Coelho, Juliana Daniel, Roger Kapatai, Georgia Al-Shabib, Ali Puleston, Richard Background: The clinical manifestations of Group A streptococcus (GAS) – (Streptococcus pyogenes) are diverse, ranging from asymptomatic colonisation to devastating invasive disease. Maternity related clusters of invasive Group A streptococcus (iGAS) infection are complex to investigate and control, especially if recurrent. Aim: We report on the investigation into three episodes of emm 75 GAS/iGAS infection in maternity patients at one hospital site over a 4 year period, two with monophyletic ancestry. Methods: The episodes are described, together with whole genome sequence isolate analyses. Single nucleotide polymorphism differences were compared with contemporaneous emm 75 genomes. Findings: Seven mothers had GAS/iGAS in over a 4 year period, emm 75, S.pyogenes and one had iGAS (in year 4) emm 3, S.pyogenes (subsequently discounted as linked). Three (clinical/screening samples) of the seven babies of emm 75 positive mothers and 3 screened healthcare workers were positive for GAS emm 75. Whole genome sequence similarity suggests a shared ancestral lineage and suggested a common source transmission but directionality of transmission cannot be inferred. However the findings indicate that persistence of a particular clone in a given setting may be long-term. Conclusions: Occupational health procedures were enhanced, staff were screened and antibiotic therapy provided to GAS positive staff and patients. The definitive source of infection could not be identified, although staff/patient transmission is the most likely route. The pattern of clonal GAS transmission over 4 years suggests long-term persistence of GAS may have occurred. Elsevier 2018-03-22 Article PeerReviewed application/pdf en cc_by_nc_nd https://eprints.nottingham.ac.uk/51180/1/20180307RecurrentiGASMaternityUnitRevision1.0%20%28002%29.pdf Dickinson, Harriet, Reacher, Mark, Nazareth, Bernadette, Eagle, Heidi, Fowler, Deirdre, Underwood, Anthony, Chand, Meera, Chalker, Victoria, Coelho, Juliana, Daniel, Roger, Kapatai, Georgia, Al-Shabib, Ali and Puleston, Richard (2018) Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit. Journal of Hospital Infection . ISSN 1532-2939 (In Press) iGAS Streptococcus maternity whole genome sequencing https://www.sciencedirect.com/science/article/pii/S0195670118301695 doi:10.1016/j.jhin.2018.03.018 doi:10.1016/j.jhin.2018.03.018
spellingShingle iGAS
Streptococcus
maternity
whole genome sequencing
Dickinson, Harriet
Reacher, Mark
Nazareth, Bernadette
Eagle, Heidi
Fowler, Deirdre
Underwood, Anthony
Chand, Meera
Chalker, Victoria
Coelho, Juliana
Daniel, Roger
Kapatai, Georgia
Al-Shabib, Ali
Puleston, Richard
Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit
title Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit
title_full Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit
title_fullStr Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit
title_full_unstemmed Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit
title_short Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit
title_sort whole genome sequencing in the investigation of recurrent invasive group a streptococcus outbreaks in a maternity unit
topic iGAS
Streptococcus
maternity
whole genome sequencing
url https://eprints.nottingham.ac.uk/51180/
https://eprints.nottingham.ac.uk/51180/
https://eprints.nottingham.ac.uk/51180/