Flux balance techniques for modelling metabolic networks and comparison with kinetic models
A variety of techniques used to model metabolic networks are examined, both kinetic (ODE) models and flux balance (FB) models. These models are applied to a case study network describing CO and CO2 metabolism in Clostridium autoethanogenum, bacteria which can produce both ethanol and butanediol from...
| Main Author: | Coleman, Matthew |
|---|---|
| Format: | Thesis (University of Nottingham only) |
| Language: | English |
| Published: |
2018
|
| Subjects: | |
| Online Access: | https://eprints.nottingham.ac.uk/50999/ |
Similar Items
From bacteria to cancer exploiting metabolic networks for industrial and therapeutic purposes
by: Tomi Andrino, Claudio
Published: (2023)
by: Tomi Andrino, Claudio
Published: (2023)
Reduced adiposity attenuates FGF21 mediated metabolic improvements in the Siberian hamster
by: Lewis, Jo E., et al.
Published: (2017)
by: Lewis, Jo E., et al.
Published: (2017)
Multi-timescale analysis of a metabolic network in synthetic biology: a kinetic model for 3-hydroxypropionic acid production via beta-alanine
by: Dalwadi, Mohit P., et al.
Published: (2017)
by: Dalwadi, Mohit P., et al.
Published: (2017)
The heterogeneity of the functional, metabolic, and molecular responses of skeletal muscle and clinical adaptations to exercise training in pre-clinical and human models
by: Farrash, Wesam
Published: (2020)
by: Farrash, Wesam
Published: (2020)
Genome-scale metabolic modelling of Clostridium autoethanogenum
by: Norman, Rupert O.J.
Published: (2019)
by: Norman, Rupert O.J.
Published: (2019)
Changes in the rate of nicotine metabolism across pregnancy: a longitudinal study
by: Bowker, Katharine, et al.
Published: (2015)
by: Bowker, Katharine, et al.
Published: (2015)
Investigation of molecular mechanisms regulating palmitate-induced metabolic inflexibility in a cell-based skeletal muscle model: physiological and pharmacological interventions.
by: Chien, Hung-Che
Published: (2020)
by: Chien, Hung-Che
Published: (2020)
Prevalence of metabolic syndrome and associated factors in Yobe state provence of Nigeria
by: Likita, Musa Audu
Published: (2014)
by: Likita, Musa Audu
Published: (2014)
Using the caffeine breath test to study drug metabolism in protein-energy malnourished children
by: Oshikoya, Kazeem Adeola
Published: (2014)
by: Oshikoya, Kazeem Adeola
Published: (2014)
Applying asymptotic methods to synthetic biology: modelling the reaction kinetics of the mevalonate pathway
by: Dalwadi, Mohit P., et al.
Published: (2018)
by: Dalwadi, Mohit P., et al.
Published: (2018)
13C-assisted metabolic flux analysis to investigate heterotrophic and mixotrophic metabolism in Cupriavidus necator H16
by: Alagesan, Swathi, et al.
Published: (2018)
by: Alagesan, Swathi, et al.
Published: (2018)
Dynamic measures of human protein metabolism with stable isotopes and mass spectrometry
by: Jaconelli, Matthew
Published: (2024)
by: Jaconelli, Matthew
Published: (2024)
An investigation into the metabolic and cardiovascular effects of phytocannabinoids using in vivo and in vitro techniques
by: Jadoon, K.A.
Published: (2016)
by: Jadoon, K.A.
Published: (2016)
Metabolic engineering of Clostridium autoethanogenum
by: Liew, Fung Min
Published: (2016)
by: Liew, Fung Min
Published: (2016)
Characterization And Growth Kinetics Of Local N2-Fixing Bacterium, Bacillus Sp. Upmb10
by: Ooi, Tze Chean
Published: (2002)
by: Ooi, Tze Chean
Published: (2002)
Metabolic engineering for butanol yield enhancement in Clostridium acetobutylicum
by: Hope, Ryan
Published: (2022)
by: Hope, Ryan
Published: (2022)
Study of ischemia-reperfusion induced metabolite changes in porcine kidney model and their potential role in acute kidney injury
by: POLISETTY, RAVINDRA VARMA
Published: (2017)
by: POLISETTY, RAVINDRA VARMA
Published: (2017)
Mathematical modelling of rod photoreceptor metabolism
by: Kunpasuruang, Wannapa
Published: (2009)
by: Kunpasuruang, Wannapa
Published: (2009)
Metabolic disorder index as predictor of performance in endurance horses
by: Mohd Rajdi, Nur Zul Izzati
Published: (2017)
by: Mohd Rajdi, Nur Zul Izzati
Published: (2017)
PEDF-induced alteration of metabolism leading to insulin resistance
by: Carnagarin, Revathy, et al.
Published: (2015)
by: Carnagarin, Revathy, et al.
Published: (2015)
Mathematical modelling of clostridial acetone-butanol-ethanol fermentation
by: Millat, Thomas, et al.
Published: (2017)
by: Millat, Thomas, et al.
Published: (2017)
The role of the pyruvate dehydrogenase complex in the regulation of human skeletal muscle fuel metabolism
by: Laithwaite, David
Published: (2009)
by: Laithwaite, David
Published: (2009)
The link between central carbon metabolism
and replication in bacillus subtilis
by: Pitoulias, Matthaios G.
Published: (2020)
by: Pitoulias, Matthaios G.
Published: (2020)
Increasing cardiac pyruvate dehydrogenase flux during chronic hypoxia improves acute hypoxic tolerance
by: Handzlik, Michal, et al.
Published: (2018)
by: Handzlik, Michal, et al.
Published: (2018)
Pain behaviour, locomotor activity, inflammation and muscle metabolic dysregulation in pre-clinical animal models of OA and RA and the impact of PPARɣ agonism intervention
by: Casanova, Nuria
Published: (2019)
by: Casanova, Nuria
Published: (2019)
Perinatal programming of appetite regulation and metabolic health
by: Dellschaft, Neele S.
Published: (2012)
by: Dellschaft, Neele S.
Published: (2012)
Antidepressant effect of Centella asiatica (L.) Urb. extract on reserpine-induced depression-like zebrafish [Danio rerio (F. Hamilton, 1822)] model via ¹H NMR metabolomics approach
by: Zakaria, Fauziahanim
Published: (2018)
by: Zakaria, Fauziahanim
Published: (2018)
Dietary and Lifestyle Factors Associated With Metabolic Syndrome in Urban Middle-Aged Women of Babol City, Mazandaran Province, Iran
by: Delavar, Mouloud Agajani
Published: (2009)
by: Delavar, Mouloud Agajani
Published: (2009)
Segment Particle Swarm Optimization Adoption for Large-Scale Kinetic Parameter Identification of Metabolic Network Model
by: Azrag, M. A. K., et al.
Published: (2018)
by: Azrag, M. A. K., et al.
Published: (2018)
Dietary and genetic regulation of B12 metabolism in sheep
by: Brassington, Amey H.
Published: (2019)
by: Brassington, Amey H.
Published: (2019)
Effect of Diet, Insulin and Exercise on the Regulation of Carbohydrate Metabolism in Health and Type 1 Diabetes
by: Chokkalingam, Kamalakkannan
Published: (2007)
by: Chokkalingam, Kamalakkannan
Published: (2007)
Potential of elateriospermum tapos blume in ameliorating maternal metabolic syndrome on female offspring of sprague dawley rats through the hypothalamic feeding circuitry
by: Balan, Santhra Segaran
Published: (2022)
by: Balan, Santhra Segaran
Published: (2022)
Bioaccumulation and metabolic impact of environmental PFAS residue on wild-caught urban wetland tiger snakes (Notechis scutatus)
by: Lettoof, Damian, et al.
Published: (2023)
by: Lettoof, Damian, et al.
Published: (2023)
The role of the vitamin D receptor in skeletal muscle protein metabolism
by: Bass, Joseph
Published: (2017)
by: Bass, Joseph
Published: (2017)
Analysis of molecular links between epigenetic regulations and energy metabolism
by: Miezaniec, Agata
Published: (2020)
by: Miezaniec, Agata
Published: (2020)
Application of network traffic flow model to road maintenance
by: Yang, Chao, et al.
Published: (2015)
by: Yang, Chao, et al.
Published: (2015)
Biohydrogen production by bacteria using sago waste and its metabolic flux balancing
by: Mohamad Puad, Noor Illi, et al.
Published: (2015)
by: Mohamad Puad, Noor Illi, et al.
Published: (2015)
Metabolic flux balance analysis of the growth of arabidopsis thaliana cell suspension cultures
by: Mohamad Puad, Noor Illi, et al.
Published: (2015)
by: Mohamad Puad, Noor Illi, et al.
Published: (2015)
The Impact of Inflammation on Pancreatic ß-Cell Metabolism, Function and Failure in T1DM and T2DM: Commonalities and Differences
by: Newsholme, Philip, et al.
Published: (2013)
by: Newsholme, Philip, et al.
Published: (2013)
Metabolic phenotyping in cells and tissues using pyruvate metabolism and nuclear magnetic resonance spectroscopy
by: Silickas, Marius
Published: (2021)
by: Silickas, Marius
Published: (2021)
Similar Items
-
From bacteria to cancer exploiting metabolic networks for industrial and therapeutic purposes
by: Tomi Andrino, Claudio
Published: (2023) -
Reduced adiposity attenuates FGF21 mediated metabolic improvements in the Siberian hamster
by: Lewis, Jo E., et al.
Published: (2017) -
Multi-timescale analysis of a metabolic network in synthetic biology: a kinetic model for 3-hydroxypropionic acid production via beta-alanine
by: Dalwadi, Mohit P., et al.
Published: (2017) -
The heterogeneity of the functional, metabolic, and molecular responses of skeletal muscle and clinical adaptations to exercise training in pre-clinical and human models
by: Farrash, Wesam
Published: (2020) -
Genome-scale metabolic modelling of Clostridium autoethanogenum
by: Norman, Rupert O.J.
Published: (2019)