Spheroid arrays for high-throughput single-cell analysis of spatial patterns and biomarker expression in 3D
We describe and share a device, methodology and image analysis algorithms, which allow up to 66 spheroids to be arranged into a gel-based array directly from a culture plate for downstream processing and analysis. Compared to processing individual samples, the technique uses 11-fold less reagents, s...
| Main Authors: | Ivanov, Delyan P., Grabowska, Anna M. |
|---|---|
| Format: | Article |
| Published: |
Nature Publishing Group
2017
|
| Online Access: | https://eprints.nottingham.ac.uk/39907/ |
Similar Items
High-throughput spheroid screens using volume, resazurin reduction and acid phosphatase activity
by: Ivanov, Delyan Pavlov, et al.
Published: (2017)
by: Ivanov, Delyan Pavlov, et al.
Published: (2017)
In vitro tissue microarrays for quick and efficient spheroid characterisation
by: Ivanov, Delyan Pavlov, et al.
Published: (2018)
by: Ivanov, Delyan Pavlov, et al.
Published: (2018)
Observability of the virialization phase of spheroidal galaxies with radio arrays
by: Massardi, M., et al.
Published: (2008)
by: Massardi, M., et al.
Published: (2008)
Assessment of drug-loaded nanoparticles in a 3D in vitro brain tumour model
by: Ivanov, Delyan Pavlov
Published: (2015)
by: Ivanov, Delyan Pavlov
Published: (2015)
Separating chemotherapy-related developmental neurotoxicity from cytotoxicity in monolayer and neurosphere cultures of human fetal brain cells
by: Ivanov, Delyan P., et al.
Published: (2016)
by: Ivanov, Delyan P., et al.
Published: (2016)
In vitro models of medulloblastoma: choosing the right tool for the job
by: Ivanov, Delyan P., et al.
Published: (2016)
by: Ivanov, Delyan P., et al.
Published: (2016)
Enrichment of Colorectal Cancer Stem Cells by Spheroidal Culture and Gene Expression Analysis of Selected ABC Transporters
by: Vimalan, Rengganaten
Published: (2016)
by: Vimalan, Rengganaten
Published: (2016)
3D spheroid models for in vitro evaluation of nanoparticles for cancer therapy
by: Tchoryk, Aleksandra
Published: (2018)
by: Tchoryk, Aleksandra
Published: (2018)
Citral induced apoptosis in MDA-MB-231 spheroid cells
by: Rosli, Rozita, et al.
Published: (2018)
by: Rosli, Rozita, et al.
Published: (2018)
Characterization of periodontal fibroblast
spheroids in vitro, interaction with 3d
membranes and potential for tissue
regeneration
by: Berahim, Zurairah
Published: (2012)
by: Berahim, Zurairah
Published: (2012)
Establishment, Characterisation And Mirna Transcriptome Profiling Of Spheroid-Enriched Cells With Breast Cancer Stem Cell Properties
by: Boo, Lily
Published: (2020)
by: Boo, Lily
Published: (2020)
Developing analytical data-informed statistical models for predicting the physical stability of drug-polymer solid dispersions using high-throughput 2D printed arrays
by: Ghazi, Noha
Published: (2024)
by: Ghazi, Noha
Published: (2024)
Enabling a high throughput real time data pipeline for a large radio telescope array with GPUs
by: Edgar, R., et al.
Published: (2010)
by: Edgar, R., et al.
Published: (2010)
Combinatorial Biomolecular Nanopatterning for High-Throughput Screening of Stem-Cell Behavior
by: Amin, Yacoub Y. I., et al.
Published: (2016)
by: Amin, Yacoub Y. I., et al.
Published: (2016)
High throughput screening for discovery of materials that control stem cell fate
by: Patel, Asha K., et al.
Published: (2016)
by: Patel, Asha K., et al.
Published: (2016)
Spheroidal forward modelling of the gravitational fields of 1-Ceres and the Moon
by: Sprlak, M., et al.
Published: (2019)
by: Sprlak, M., et al.
Published: (2019)
Routes to Spheroidal Starting Material for Semi-Solid Metal Processing
by: Asnul Hadi, Ahmad, et al.
Published: (2014)
by: Asnul Hadi, Ahmad, et al.
Published: (2014)
Truncated and Spheroidal Ag Nanoparticles: A Matter of Size Transformation
by: Nurul Akmal, Che Lah, et al.
Published: (2017)
by: Nurul Akmal, Che Lah, et al.
Published: (2017)
MiRNA transcriptome profiling of spheroid-enriched cells with cancer stem cell properties in human breast MCF-7 cell line
by: Boo, Lily, et al.
Published: (2016)
by: Boo, Lily, et al.
Published: (2016)
Development of high-throughput electron tomography for 3D morphological characterisation of soot nanoparticles
by: Haffner-Staton, Ephraim
Published: (2020)
by: Haffner-Staton, Ephraim
Published: (2020)
Use of humanised reporter cell lines for high-throughput detection of allergic sensitization
by: Kalli, Marina
Published: (2021)
by: Kalli, Marina
Published: (2021)
PERSONALIZED CELL CULTURE MODEL FOR HIGH-THROUGHPUT SCREENING FOLLOWING CFTR CORRECTION
by: Looi, K., et al.
Published: (2018)
by: Looi, K., et al.
Published: (2018)
Massive post-starburst galaxies at z > 1 are compact proto-spheroids
by: Almaini, Omar, et al.
Published: (2017)
by: Almaini, Omar, et al.
Published: (2017)
Scattering from Diatomic Molecules in the Spheroidal Convergent Close-Coupling Formalism
by: Savage, Jeremy Stephen
Published: (2018)
by: Savage, Jeremy Stephen
Published: (2018)
A fast radio burst in the direction of the Carina dwarf spheroidal galaxy
by: Ravi, V., et al.
Published: (2015)
by: Ravi, V., et al.
Published: (2015)
Spherical harmonic analysis of a harmonic function given on a spheroid
by: Claessens, Sten
Published: (2016)
by: Claessens, Sten
Published: (2016)
The potentiality of Citral in targeting breast cancer multicellular tumour spheroids (MTS)
by: Rusli, Muhammad Ehsan Fitri, et al.
Published: (2022)
by: Rusli, Muhammad Ehsan Fitri, et al.
Published: (2022)
Recombinant expression of native Tritrypticin and optimisation of an In vivo biosynthesis platform for high-throughput peptide therapeutics discovery
by: Mahendran, Arun Suria Karnan
Published: (2025)
by: Mahendran, Arun Suria Karnan
Published: (2025)
High Throughput Virtual Screening For Inhibitors Of Salmonella typhi’s Dalanine- D-Alanine Ligase A
by: Tan, Chen Shen
Published: (2015)
by: Tan, Chen Shen
Published: (2015)
Spatial filtering experiment with the ASKAP BETA array
by: Hellbourg, Gregory, et al.
Published: (2016)
by: Hellbourg, Gregory, et al.
Published: (2016)
The association of vitamin D status with dyslipidaemia and biomarkers of endothelial cell activation in older Australians
by: Alyami, Ali Mahdi, et al.
Published: (2016)
by: Alyami, Ali Mahdi, et al.
Published: (2016)
Mineralogy and geochemistry of atypical reduction spheroids from the Tumblagooda Sandstone, Western Australia
by: Fox, David C.M., et al.
Published: (2020)
by: Fox, David C.M., et al.
Published: (2020)
Rapid nano-gram scale screening method of micro-arrays to evaluate drug-polymer blends using high-throughput printing technology
by: Taresco, Vincenzo, et al.
Published: (2017)
by: Taresco, Vincenzo, et al.
Published: (2017)
Data on the number and frequency of scientific literature citations for established medulloblastoma cell lines
by: Ivanov, D.P., et al.
Published: (2016)
by: Ivanov, D.P., et al.
Published: (2016)
Development of three-dimensional spheroid models for the analysis of medulloblastoma drug response and metastatic dissemination
by: Roper, Sophie Jayne
Published: (2020)
by: Roper, Sophie Jayne
Published: (2020)
Electromagnetic scattering computation methods for
very small spheroidal dust particles: theory and applications
by: Bashir, Saad Osman, et al.
Published: (2013)
by: Bashir, Saad Osman, et al.
Published: (2013)
Electron scattering from molecular hydrogen in a spheroidal convergent close-coupling formalism
by: Savage, Jeremy, et al.
Published: (2014)
by: Savage, Jeremy, et al.
Published: (2014)
A Current-Sensor-Free Incremental Conductance Single Cell MPPT for High Performance Vehicle Solar Arrays
by: Wolfs, Peter, et al.
Published: (2006)
by: Wolfs, Peter, et al.
Published: (2006)
The isolation of spatial patterning modes in a mathematical model of juxtacrine cell signalling
by: O'Dea, Reuben D., et al.
Published: (2013)
by: O'Dea, Reuben D., et al.
Published: (2013)
Progress towards a methodology for high throughput 3D
reconstruction of soot nanoparticles via electron tomography
by: Haffner-Staton, Ephraim, et al.
Published: (2018)
by: Haffner-Staton, Ephraim, et al.
Published: (2018)
Similar Items
-
High-throughput spheroid screens using volume, resazurin reduction and acid phosphatase activity
by: Ivanov, Delyan Pavlov, et al.
Published: (2017) -
In vitro tissue microarrays for quick and efficient spheroid characterisation
by: Ivanov, Delyan Pavlov, et al.
Published: (2018) -
Observability of the virialization phase of spheroidal galaxies with radio arrays
by: Massardi, M., et al.
Published: (2008) -
Assessment of drug-loaded nanoparticles in a 3D in vitro brain tumour model
by: Ivanov, Delyan Pavlov
Published: (2015) -
Separating chemotherapy-related developmental neurotoxicity from cytotoxicity in monolayer and neurosphere cultures of human fetal brain cells
by: Ivanov, Delyan P., et al.
Published: (2016)