A sequence-based approach for prediction of CsrA/RsmA targets in bacteria with experimental validation in Pseudomonas aeruginosa
CsrA/RsmA homologs are an extensive family of ribonucleic acid (RNA)-binding proteins that function as global post-transcriptional regulators controlling important cellular processes such as secondary metabolism, motility, biofilm formation and the production and secretion of virulence factors in di...
| Main Authors: | Kulkarni, Prajna R., Jia, Tao, Kuehne, Sarah H., Kerkering, Thomas M., Morris, Elizabeth R., Searle, Mark S., Heeb, Stephan, Rao, Jayasimha, Kulkarni, Rahul V. |
|---|---|
| Format: | Article |
| Published: |
Oxford University Press
2014
|
| Online Access: | https://eprints.nottingham.ac.uk/34767/ |
Similar Items
The Pseudomonas putida CsrA/RsmA homologues negatively affect c-di-GMP pools and biofilm formation through the GGDEF/EAL response regulator CfcR
by: Huertas-Rosales, Óscar, et al.
Published: (2017)
by: Huertas-Rosales, Óscar, et al.
Published: (2017)
RsmN : a new atypical RsmA homologue in Pseudomonas aeruginosa
by: Lovelock, Laura Charlotte
Published: (2012)
by: Lovelock, Laura Charlotte
Published: (2012)
RsmW, Pseudomonas aeruginosa small non-coding RsmA-binding RNA upregulated in biofilm versus planktonic growth conditions
by: Miller, Christine L., et al.
Published: (2016)
by: Miller, Christine L., et al.
Published: (2016)
Pseudomonas aeruginosa RsmA plays an important role during murine infection by influencing colonization, virulence, persistence, and pulmonary inflammation
by: Mulcahy, H., et al.
Published: (2008)
by: Mulcahy, H., et al.
Published: (2008)
Genome-wide mapping of the RNA targets of the Pseudomonas
aeruginosa riboregulatory protein RsmN
by: Romero, Manuel, et al.
Published: (2018)
by: Romero, Manuel, et al.
Published: (2018)
RNA-seq reveals the RNA binding proteins, Hfq and RsmA, play various roles in virulence, antibiotic production and genomic flux in Serratia sp. ATCC 39006.
by: Wilf, N., et al.
Published: (2013)
by: Wilf, N., et al.
Published: (2013)
Low oxygen induces the type III secretion system in Pseudomonas aeruginosa via modulation of the small RNAs rsmZ and rsmY
by: O'Callaghan, J., et al.
Published: (2011)
by: O'Callaghan, J., et al.
Published: (2011)
Optimised chronic infection models demonstrate that siderophore ‘cheating’ in Pseudomonas aeruginosa is context specific
by: Harrison, Freya, et al.
Published: (2017)
by: Harrison, Freya, et al.
Published: (2017)
Differential regulation of the phenazine biosynthetic operons by quorum sensing in Pseudomonas aeruginosa PAO1-N
by: Higgins, Steven, et al.
Published: (2018)
by: Higgins, Steven, et al.
Published: (2018)
Biotic inactivation of the Pseudomonas aeruginosa quinolone signal molecule
by: Soh, Eliza Ye-Chen, et al.
Published: (2015)
by: Soh, Eliza Ye-Chen, et al.
Published: (2015)
A novel virulence strategy for Pseudomonas aeruginosa mediated by an autotransporter with arginine-specific aminopeptidase activity
by: Luckett, Jeni, et al.
Published: (2012)
by: Luckett, Jeni, et al.
Published: (2012)
Identification of a Pseudomonas aeruginosa PAO1 DNA methyltransferase, its Targets, and physiological roles
by: Doberenz, Sebastian, et al.
Published: (2017)
by: Doberenz, Sebastian, et al.
Published: (2017)
Rational design and synthesis of modified teixobactin analogues: in vitro antibacterial activity against Staphylococcus aureus, Propionibacterium acnes and Pseudomonas aeruginosa
by: Ng, Vivian, et al.
Published: (2018)
by: Ng, Vivian, et al.
Published: (2018)
Riboregulation in Pseudomonas aeruginosa
by: Silistre, Hazel
Published: (2016)
by: Silistre, Hazel
Published: (2016)
Metallo-ä-lactamase-producing pseudomonas aeruginosa.
by: Mohd Taib, Niazlin, et al.
by: Mohd Taib, Niazlin, et al.
Unravelling the genome-wide contributions of specific 2-alkyl-4-quinolones and PqsE to quorum sensing in Pseudomonas aeruginosa
by: Rampioni, Giordano, et al.
Published: (2016)
by: Rampioni, Giordano, et al.
Published: (2016)
In silico and in vitro-guided identification of inhibitors of alkylquinolone-dependent quorum sensing in Pseudomonas aeruginosa
by: Soukarieh, Fadi, et al.
Published: (2018)
by: Soukarieh, Fadi, et al.
Published: (2018)
Study of Rsm/Gac post-transcriptional regulation by quorum sensing, extracellular and intracellular signals in Pseugomonas aeruginosa
by: Righetti, Karima Maria
Published: (2011)
by: Righetti, Karima Maria
Published: (2011)
Emerging role of management education for growing and developing Agri-business in Indian scenario: a Review / Virupaxayya Kulkarni
by: Kulkarni, Virupaxayya
Published: (2019)
by: Kulkarni, Virupaxayya
Published: (2019)
SadB is a Pseudomonas aeruginosa global regulator
by: Papangeli, Maria
Published: (2022)
by: Papangeli, Maria
Published: (2022)
Granulocyte-macrophage colony stimulatory factor enhances the pro-inflammatory response of interferon-γ-treated macrophages to pseudomonas aeruginosa infection
by: Singh, Sonali, et al.
Published: (2015)
by: Singh, Sonali, et al.
Published: (2015)
Structural basis for native agonist and synthetic inhibitor recognition by the Pseudomonas aeruginosa quorum sensing regulator PqsR (MvfR)
by: Ilangovan, Aravindan, et al.
Published: (2013)
by: Ilangovan, Aravindan, et al.
Published: (2013)
Biosurfactant Production by Pseudomonas Aeruginosa 181
by: Yassin Al-Araji, Laith Issa
Published: (2004)
by: Yassin Al-Araji, Laith Issa
Published: (2004)
The requirements at the C-3 position of alkylquinolones for signalling in Pseudomonas aeruginosa
by: Shanahan, R., et al.
Published: (2017)
by: Shanahan, R., et al.
Published: (2017)
Antibiotic strategies for eradicating Pseudomonas aeruginosa in people with cystic fibrosis
by: Langton Hewer, Simon C., et al.
Published: (2014)
by: Langton Hewer, Simon C., et al.
Published: (2014)
Novel approaches to the treatment of Pseudomonas aeruginosa infections in cystic fibrosis
by: Hurley, M.N., et al.
Published: (2012)
by: Hurley, M.N., et al.
Published: (2012)
An Insight of Synergy between Pseudomonas aeruginosa and Klebsiella variicola in a Microbial Fuel Cell
by: Islam, M. A., et al.
Published: (2018)
by: Islam, M. A., et al.
Published: (2018)
A Review: Fiber Metal Laminates (FML’s) - Manufacturing, Test Methods and Numerical Modeling
by: Salve, Aniket, et al.
Published: (2016)
by: Salve, Aniket, et al.
Published: (2016)
The antimicrobial effect of flax seed on pseudomonas aeruginosa
by: Mohamed Yusoff, Nurul Fatihah, et al.
Published: (2019)
by: Mohamed Yusoff, Nurul Fatihah, et al.
Published: (2019)
The evolution of virulence in the opportunistic pathogen Pseudomonas aeruginosa
by: Day, Alexander
Published: (2017)
by: Day, Alexander
Published: (2017)
A glycopeptide dendrimer inhibitor of the galactose specific lectin LecA & of Pseudomonas aeruginosa biofilms
by: Kadam, Rameshwar U., et al.
Published: (2011)
by: Kadam, Rameshwar U., et al.
Published: (2011)
IDENTIFYING THE CHARACTERISTICS AND DETERMINANTS
OF SUCCESSFUL SOCIAL INNOVATIONS
by: Kulkarni, Arpit
Published: (2014)
by: Kulkarni, Arpit
Published: (2014)
Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium
by: Freschi, Luca, et al.
Published: (2015)
by: Freschi, Luca, et al.
Published: (2015)
Biotransformation of ω fatty acids using pseudomonas aeruginosa
by: Omar, Muhammad Nor
Published: (2012)
by: Omar, Muhammad Nor
Published: (2012)
Interplay between quorum sensing and metabolism in Pseudomonas aeruginosa
by: Ruparell, Avika
Published: (2012)
by: Ruparell, Avika
Published: (2012)
Application of whole genome sequencing to the study of Pseudomonas aeruginosa
by: Naghra, H
Published: (2016)
by: Naghra, H
Published: (2016)
Elucidating the mechanism of action of novel lactams on Pseudomonas aeruginosa
by: Pantalone, P.
Published: (2019)
by: Pantalone, P.
Published: (2019)
Role of lectin receptors in recognition of Pseudomonas aeruginosa biofilms
by: Almuhanna, Yasir Saleh I
Published: (2021)
by: Almuhanna, Yasir Saleh I
Published: (2021)
The interplay between Pseudomonas aeruginosa and human macrophages and neutrophils
by: Muntaka, Sirina
Published: (2017)
by: Muntaka, Sirina
Published: (2017)
Mitigating the harm caused by Pseudomonas aeruginosa in Cystic Fibrosis
by: Palser, Sally C.
Published: (2024)
by: Palser, Sally C.
Published: (2024)
Similar Items
-
The Pseudomonas putida CsrA/RsmA homologues negatively affect c-di-GMP pools and biofilm formation through the GGDEF/EAL response regulator CfcR
by: Huertas-Rosales, Óscar, et al.
Published: (2017) -
RsmN : a new atypical RsmA homologue in Pseudomonas aeruginosa
by: Lovelock, Laura Charlotte
Published: (2012) -
RsmW, Pseudomonas aeruginosa small non-coding RsmA-binding RNA upregulated in biofilm versus planktonic growth conditions
by: Miller, Christine L., et al.
Published: (2016) -
Pseudomonas aeruginosa RsmA plays an important role during murine infection by influencing colonization, virulence, persistence, and pulmonary inflammation
by: Mulcahy, H., et al.
Published: (2008) -
Genome-wide mapping of the RNA targets of the Pseudomonas
aeruginosa riboregulatory protein RsmN
by: Romero, Manuel, et al.
Published: (2018)