High-resolution mapping of in vivo genomic transcription factor binding sites using in situ DNase I footprinting and ChIP-seq

High-resolution mapping of in vivo genomic transcription factor binding sites using in situ DNase I footprinting and ChIP-seq

Accurate identification of the DNA-binding sites of transcription factors and other DNA-binding proteins on the genome is crucial to understanding their molecular interactions with DNA. Here, we describe a new method: Genome Footprinting by high-throughput sequencing (GeF-seq), which combines in viv...

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Bibliographic Details
Main Authors: Chumsakul, Onuma, Nakamura, Kensuke, Kurata, Tetsuya, Hobman, Jon L., Ogasawara, Naotake, Oshima, Taku, Ishikawa, Shu
Format: Article
Published: Oxford University Press 2013
Subjects:
GeF-seq; ChIP-seq; AbrB; Bacillus subtilis
Online Access:https://eprints.nottingham.ac.uk/31617/

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