OriDB, the DNA replication origin database updated and extended
OriDB (http://www.oridb.org/) is a database containing collated genome-wide mapping studies of confirmed and predicted replication origin sites. The original database collated and curated Saccharomyces cerevisiae origin mapping studies. Here, we report that the OriDB database and web site have been...
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| Format: | Article |
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Oxford Journals
2012
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| Online Access: | https://eprints.nottingham.ac.uk/2494/ |
| _version_ | 1848790799516434432 |
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| author | Siow, Cheuk C. Nieduszynska, Sian R. Müller, Carolin A. Nieduszynski, Conrad A. |
| author_facet | Siow, Cheuk C. Nieduszynska, Sian R. Müller, Carolin A. Nieduszynski, Conrad A. |
| author_sort | Siow, Cheuk C. |
| building | Nottingham Research Data Repository |
| collection | Online Access |
| description | OriDB (http://www.oridb.org/) is a database containing collated genome-wide mapping studies of confirmed and predicted replication origin sites. The original database collated and curated Saccharomyces cerevisiae origin mapping studies. Here, we report that the OriDB database and web site have been revamped to improve user accessibility to curated data sets, to greatly increase the number of curated origin mapping studies, and to include the collation of replication origin sites in the fission yeast Schizosaccharomyces pombe. The revised database structure underlies these improvements and will facilitate further expansion in the future. The updated OriDB for S. cerevisiae is available at http://cerevisiae.oridb.org/ and for S. pombe at http://pombe.oridb.org/. |
| first_indexed | 2025-11-14T18:18:21Z |
| format | Article |
| id | nottingham-2494 |
| institution | University of Nottingham Malaysia Campus |
| institution_category | Local University |
| last_indexed | 2025-11-14T18:18:21Z |
| publishDate | 2012 |
| publisher | Oxford Journals |
| recordtype | eprints |
| repository_type | Digital Repository |
| spelling | nottingham-24942020-05-04T20:22:52Z https://eprints.nottingham.ac.uk/2494/ OriDB, the DNA replication origin database updated and extended Siow, Cheuk C. Nieduszynska, Sian R. Müller, Carolin A. Nieduszynski, Conrad A. OriDB (http://www.oridb.org/) is a database containing collated genome-wide mapping studies of confirmed and predicted replication origin sites. The original database collated and curated Saccharomyces cerevisiae origin mapping studies. Here, we report that the OriDB database and web site have been revamped to improve user accessibility to curated data sets, to greatly increase the number of curated origin mapping studies, and to include the collation of replication origin sites in the fission yeast Schizosaccharomyces pombe. The revised database structure underlies these improvements and will facilitate further expansion in the future. The updated OriDB for S. cerevisiae is available at http://cerevisiae.oridb.org/ and for S. pombe at http://pombe.oridb.org/. Oxford Journals 2012 Article PeerReviewed Siow, Cheuk C., Nieduszynska, Sian R., Müller, Carolin A. and Nieduszynski, Conrad A. (2012) OriDB, the DNA replication origin database updated and extended. Nucleic Acids Research, 40 (D1). D682-D686. ISSN 0305-1048 http://nar.oxfordjournals.org/content/40/D1/D682.long#sec-8 doi:10.1093/nar/gkr1091 doi:10.1093/nar/gkr1091 |
| spellingShingle | Siow, Cheuk C. Nieduszynska, Sian R. Müller, Carolin A. Nieduszynski, Conrad A. OriDB, the DNA replication origin database updated and extended |
| title | OriDB, the DNA replication origin database updated and extended |
| title_full | OriDB, the DNA replication origin database updated and extended |
| title_fullStr | OriDB, the DNA replication origin database updated and extended |
| title_full_unstemmed | OriDB, the DNA replication origin database updated and extended |
| title_short | OriDB, the DNA replication origin database updated and extended |
| title_sort | oridb, the dna replication origin database updated and extended |
| url | https://eprints.nottingham.ac.uk/2494/ https://eprints.nottingham.ac.uk/2494/ https://eprints.nottingham.ac.uk/2494/ |