Copy number variation of CNVesv27061 analysis among young adults with high blood pressure using optimized droplet digital polymerase chain reaction (ddPCR) method

Several reports and databases on genomic variants have associated variation in DNA sequences (≥ 1kb), or copy number variation (CNV), with susceptibility to common diseases. However, very few reports are found on hypertension and no study has been reported on CNV in prehypertensive and hypertensiv...

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Main Authors: Siti Radziah, S. A., Mohd Shah, Azarisman Shah, Aida, N. S.M., A.Talib, Norlelawati, Abdullah, Aszrin
Format: Proceeding Paper
Language:English
English
English
Published: Elsevier Ltd 2019
Subjects:
Online Access:http://irep.iium.edu.my/79709/
http://irep.iium.edu.my/79709/20/79709_Copy%20number%20variation%20of%20CNVesv27061_article.pdf
http://irep.iium.edu.my/79709/2/79709_Copy%20number%20variation%20of%20CNVesv27061_scopus.pdf
http://irep.iium.edu.my/79709/13/79709_Copy%20number%20variation%20of%20CNVesv27061_wos.pdf
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author Siti Radziah, S. A.
Mohd Shah, Azarisman Shah
Aida, N. S.M.
A.Talib, Norlelawati
Abdullah, Aszrin
author_facet Siti Radziah, S. A.
Mohd Shah, Azarisman Shah
Aida, N. S.M.
A.Talib, Norlelawati
Abdullah, Aszrin
author_sort Siti Radziah, S. A.
building IIUM Repository
collection Online Access
description Several reports and databases on genomic variants have associated variation in DNA sequences (≥ 1kb), or copy number variation (CNV), with susceptibility to common diseases. However, very few reports are found on hypertension and no study has been reported on CNV in prehypertensive and hypertensive young adult Malaysians. In this comparative cross-sectional study, 133 young adults were recruited, comprising of normotensive (45 subjects), prehypertensive (40 subjects) and mild hypertensive (48 subjects) subjects. DNA for CNV determination was extracted from 3 ml of blood samples collected. CNV esv27061 was analysed using optimized droplet digital polymerase chain reaction (ddPCR) method which has enhanced sensitivity and precision. Frequency distribution patterns of CNV among mild hypertensives showed highest peak copy-number-gain (number of copies more than 2) particularly in copy numbers 3 and 5. The prehypertensive subjects exhibited marked increase in copy number 5 when compared with normotensives. All the subjects in this study showed low frequency distribution pattern for copy numbers 2, 6 and 7. This discovery emphasizes the importance of frequency patterns in determining CNV status of prehypertensive and mild hypertensive subjects. Optimization method in this study showed that the detection of CNV esv27061 is possible in our sample population.
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format Proceeding Paper
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institution International Islamic University Malaysia
institution_category Local University
language English
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last_indexed 2025-11-14T17:46:57Z
publishDate 2019
publisher Elsevier Ltd
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spelling iium-797092020-07-10T02:46:28Z http://irep.iium.edu.my/79709/ Copy number variation of CNVesv27061 analysis among young adults with high blood pressure using optimized droplet digital polymerase chain reaction (ddPCR) method Siti Radziah, S. A. Mohd Shah, Azarisman Shah Aida, N. S.M. A.Talib, Norlelawati Abdullah, Aszrin QR Microbiology R Medicine (General) RC Internal medicine Several reports and databases on genomic variants have associated variation in DNA sequences (≥ 1kb), or copy number variation (CNV), with susceptibility to common diseases. However, very few reports are found on hypertension and no study has been reported on CNV in prehypertensive and hypertensive young adult Malaysians. In this comparative cross-sectional study, 133 young adults were recruited, comprising of normotensive (45 subjects), prehypertensive (40 subjects) and mild hypertensive (48 subjects) subjects. DNA for CNV determination was extracted from 3 ml of blood samples collected. CNV esv27061 was analysed using optimized droplet digital polymerase chain reaction (ddPCR) method which has enhanced sensitivity and precision. Frequency distribution patterns of CNV among mild hypertensives showed highest peak copy-number-gain (number of copies more than 2) particularly in copy numbers 3 and 5. The prehypertensive subjects exhibited marked increase in copy number 5 when compared with normotensives. All the subjects in this study showed low frequency distribution pattern for copy numbers 2, 6 and 7. This discovery emphasizes the importance of frequency patterns in determining CNV status of prehypertensive and mild hypertensive subjects. Optimization method in this study showed that the detection of CNV esv27061 is possible in our sample population. Elsevier Ltd 2019 Proceeding Paper NonPeerReviewed application/pdf en http://irep.iium.edu.my/79709/20/79709_Copy%20number%20variation%20of%20CNVesv27061_article.pdf application/pdf en http://irep.iium.edu.my/79709/2/79709_Copy%20number%20variation%20of%20CNVesv27061_scopus.pdf application/pdf en http://irep.iium.edu.my/79709/13/79709_Copy%20number%20variation%20of%20CNVesv27061_wos.pdf Siti Radziah, S. A. and Mohd Shah, Azarisman Shah and Aida, N. S.M. and A.Talib, Norlelawati and Abdullah, Aszrin (2019) Copy number variation of CNVesv27061 analysis among young adults with high blood pressure using optimized droplet digital polymerase chain reaction (ddPCR) method. In: "2017 Conference on Biomedical and Advanced Materials, Bio-CAM 2017, 28 - 29 Nov 2017, Langkawi Island, Malaysia. https://pdf.sciencedirectassets.com/305927/1-s2.0-S2214785319X00358/1-s2.0-S2214785319314762/main.pdf?X-Amz-Security-Token=IQoJb3JpZ2luX2VjEFYaCXVzLWVhc3QtMSJGMEQCIApaSGqBudmgCa8f0lOusrwxoB5HpQvoPUio0OsvWOTEAiByTME4WVMb%2BsxEgOrZEPEyNfky3ROMGsJV6%2BF%2B8JebICq9AwjO%2F%2F%2F%2F%2F%2F%2F%2F%2F%2F8BEAMaDDA1OTAwMzU0Njg2NSIM91OFJawLILRZ%2F5UkKpEDM4cy4KR7sj%2FWM7RVhsHYye4hbn3qtNBZQa7KRYZs9%2FshYeQd0DajYfPF90zOjepazYHtQtqdQX2BiMy5y3ZnX8aGF%2FmIcZOZwgHD5WVYS%2Fs0Gk42dkeBeLODTLv3vqf4qdajYwa63axt%2B58whbK6OBtU1sc%2F4KJ%2B2yjk6%2BGAf614WnKb8c2G%2FPGbOgrnmKLdpiExrMRHcTBJtXF5JfAbaF%2F963BM6a7bkDLvXZ6AIxciGU%2BduN24vbGdw7X2PwbRAASllMeBS6U4ivhKclNm7H9%2FOp6oWhXyC3FCHzqBsQDpTac32ZODGg%2BImTDkQmGkUAbUzENQF281l4PbNxqfEvVXh%2FXhP4kXjqP1Jj9r01cSVv4UcoEBpNJSQBGgFjArNfBfEUmC5SriLcpku9jVAEk35RM30n%2BQjAdICNjr3TNQxzimHl%2FQSN5jThoT%2BroUOpGM%2F7SGehmZ0XsHYOtrxqHCyuwE359J4J6Q%2FT850NY7W9BGOm1FnEotD7SHgttyAPxZl2riauDtK4vTLuFeQ7kw18um9wU67AGAODzDlnMCyeGWozcQ54IPST%2BC%2FHf1lwbL4bfLy8zwfO0k5CWfhJdkXBXWVaB7km9P%2Bp9l5ODytWi4Mgk7%2FxcslgGO9WKRfwUf5rG7ujikSPq1oQOD6xWzMpT4hhSfQCjyOC0Emtg%2FEr81YH2y7PKsJyZ3zE98bzaveI2D53SPDnLPFc3gwT10GaRWz6pP7iFW6KHZsitNIvZ5i2jLyUzsAlK7%2BVfpX3xmUSIrkQbram12%2BWQQ%2BPq50%2FZEE5mS80hvLwQt8IaEC%2Bu9TV6giw%2BORBxSxM752oGtebH8VHCsUzmPl0le4SUEHbxQyQ%3D%3D&X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Date=20200617T055235Z&X-Amz-SignedHeaders=host&X-Amz-Expires=300&X-Amz-Credential=ASIAQ3PHCVTYV4SIEFWR%2F20200617%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Signature=c1b0c5ae9a24473b0a30aab00c7435293934faf38b7d6b6d710009f5fab2f6ef&hash=b63a33682445c2cbd23e3da7a6f391c187b5fb964074f3264b20f4e5191034a8&host=68042c943591013ac2b2430a89b270f6af2c76d8dfd086a07176afe7c76c2c61&pii=S2214785319314762&tid=spdf-5ec4ed58-c36b-42d9-bc76-e8995af07acc&sid=f315461c608a484f4568371-936d5b70a2b8gxrqb&type=client 10.1016/j.matpr.2019.06.127
spellingShingle QR Microbiology
R Medicine (General)
RC Internal medicine
Siti Radziah, S. A.
Mohd Shah, Azarisman Shah
Aida, N. S.M.
A.Talib, Norlelawati
Abdullah, Aszrin
Copy number variation of CNVesv27061 analysis among young adults with high blood pressure using optimized droplet digital polymerase chain reaction (ddPCR) method
title Copy number variation of CNVesv27061 analysis among young adults with high blood pressure using optimized droplet digital polymerase chain reaction (ddPCR) method
title_full Copy number variation of CNVesv27061 analysis among young adults with high blood pressure using optimized droplet digital polymerase chain reaction (ddPCR) method
title_fullStr Copy number variation of CNVesv27061 analysis among young adults with high blood pressure using optimized droplet digital polymerase chain reaction (ddPCR) method
title_full_unstemmed Copy number variation of CNVesv27061 analysis among young adults with high blood pressure using optimized droplet digital polymerase chain reaction (ddPCR) method
title_short Copy number variation of CNVesv27061 analysis among young adults with high blood pressure using optimized droplet digital polymerase chain reaction (ddPCR) method
title_sort copy number variation of cnvesv27061 analysis among young adults with high blood pressure using optimized droplet digital polymerase chain reaction (ddpcr) method
topic QR Microbiology
R Medicine (General)
RC Internal medicine
url http://irep.iium.edu.my/79709/
http://irep.iium.edu.my/79709/
http://irep.iium.edu.my/79709/
http://irep.iium.edu.my/79709/20/79709_Copy%20number%20variation%20of%20CNVesv27061_article.pdf
http://irep.iium.edu.my/79709/2/79709_Copy%20number%20variation%20of%20CNVesv27061_scopus.pdf
http://irep.iium.edu.my/79709/13/79709_Copy%20number%20variation%20of%20CNVesv27061_wos.pdf