Understanding thermostability factors of Aspergillus niger PhyA phytase: a molecular dynamics study
Abstract Molecular dynamics simulation was used to study the dynamic differences between native Aspergillus niger PhyA phytase and a mutant with 20 % greater thermostability. Atomic root mean square deviation, radius of gyration, and number of hydrogen bonds and salt bridges are examined to det...
| Main Authors: | Noorbatcha, Ibrahim Ali, Sultan, Anas Mufid Nasri, Mohd. Salleh, Hamzah, Amid, Azura |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Springer
2013
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| Subjects: | |
| Online Access: | http://irep.iium.edu.my/30144/ http://irep.iium.edu.my/30144/1/PhyA_Phytase_PJ_%282013%29_32-309-316.pdf |
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