A signal boosting technique for gene prediction
This paper presents the signal boosting technique for gene and exon identification of a DNA sequence. Newly proposed signal boosting technique is used to enhance the coding region and improve the likelihood of correctly identifying the coding region. This new method is compared with other genomic s...
| Main Authors: | , , |
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| Format: | Proceeding Paper |
| Language: | English |
| Published: |
IEEE Xplore
2007
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| Subjects: | |
| Online Access: | http://irep.iium.edu.my/170/ http://irep.iium.edu.my/170/1/a_signal_boosting_tecniques.pdf |
| _version_ | 1848775669080653824 |
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| author | Gunawan, Teddy Surya Ambikairajah, Eliathamby Epps, Julien |
| author_facet | Gunawan, Teddy Surya Ambikairajah, Eliathamby Epps, Julien |
| author_sort | Gunawan, Teddy Surya |
| building | IIUM Repository |
| collection | Online Access |
| description | This paper presents the signal boosting technique for gene and exon identification of a DNA sequence. Newly proposed signal boosting technique is used to enhance the coding
region and improve the likelihood of correctly identifying the coding region. This new method is compared with other genomic signal processing techniques, such as DFT, IIR anti-notch filter, and multistage filters. Results show that the ratio of coding to non-coding energy was enhanced by almost twice. Furthermore, the proposed method outperforms other methods in terms of sensitivity, specificity, and prediction rate, when testing with 78 sequences from HMR195 database. |
| first_indexed | 2025-11-14T14:17:52Z |
| format | Proceeding Paper |
| id | iium-170 |
| institution | International Islamic University Malaysia |
| institution_category | Local University |
| language | English |
| last_indexed | 2025-11-14T14:17:52Z |
| publishDate | 2007 |
| publisher | IEEE Xplore |
| recordtype | eprints |
| repository_type | Digital Repository |
| spelling | iium-1702013-06-26T05:18:29Z http://irep.iium.edu.my/170/ A signal boosting technique for gene prediction Gunawan, Teddy Surya Ambikairajah, Eliathamby Epps, Julien QH426 Genetics This paper presents the signal boosting technique for gene and exon identification of a DNA sequence. Newly proposed signal boosting technique is used to enhance the coding region and improve the likelihood of correctly identifying the coding region. This new method is compared with other genomic signal processing techniques, such as DFT, IIR anti-notch filter, and multistage filters. Results show that the ratio of coding to non-coding energy was enhanced by almost twice. Furthermore, the proposed method outperforms other methods in terms of sensitivity, specificity, and prediction rate, when testing with 78 sequences from HMR195 database. IEEE Xplore 2007 Proceeding Paper PeerReviewed application/pdf en http://irep.iium.edu.my/170/1/a_signal_boosting_tecniques.pdf Gunawan, Teddy Surya and Ambikairajah, Eliathamby and Epps, Julien (2007) A signal boosting technique for gene prediction. In: Proceeding of 6th International Conference on Information, Communications and Signal Processing (ICICS 2007), 10-13 December 2007, Singapore. http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=4517686 10.1109/ICASSP.2008.4517686 |
| spellingShingle | QH426 Genetics Gunawan, Teddy Surya Ambikairajah, Eliathamby Epps, Julien A signal boosting technique for gene prediction |
| title | A signal boosting technique for gene prediction |
| title_full | A signal boosting technique for gene prediction |
| title_fullStr | A signal boosting technique for gene prediction |
| title_full_unstemmed | A signal boosting technique for gene prediction |
| title_short | A signal boosting technique for gene prediction |
| title_sort | signal boosting technique for gene prediction |
| topic | QH426 Genetics |
| url | http://irep.iium.edu.my/170/ http://irep.iium.edu.my/170/ http://irep.iium.edu.my/170/ http://irep.iium.edu.my/170/1/a_signal_boosting_tecniques.pdf |