Genomic and Comparative Analysis of the Class Dothideomycetes

QR Code

Genomic and Comparative Analysis of the Class Dothideomycetes

The class Dothideomycetes (Schoch et al. 2009) is a recently defined taxon within the phylum Ascomycota, with approximately 20,000 member species. Many species are important phytopathogens employing diverse pathogenicity strategies. This review compares the currently available genome sequences, incl...

Full description

Bibliographic Details
Main Authors:	Hane, James, Williams, A., Oliver, Richard
Format:	Book Chapter
Published:	Springer Berlin Heidelberg 2011
Online Access:	http://hdl.handle.net/20.500.11937/9391

Similar Items

Dothideomycete-plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum
by: Hane, J., et al.
Published: (2007)

Structural characterisation of the interaction between Triticum aestivum and the dothideomycete pathogen Stagonospora nodorum
by: Solomon, P., et al.
Published: (2006)

Pan-parastagonospora comparative genome analysis-effector prediction and genome evolution
by: Syme, Robert, et al.
Published: (2018)

Resequencing and comparative genomics of stagonospora nodorum: Sectional gene absence and effector discovery
by: Syme, Robert, et al.
Published: (2013)

The past, present and future of secondary metabolite research in the Dothideomycetes
by: Muria-González, Mariano Jordi, et al.
Published: (2015)

Overview of genomic and bioinformatic resources for Zymoseptoria.
by: Renwick, Alison, et al.
Published: (2015)

Genome sequencing and comparative genomics of the broad host-range pathogen Rhizoctonia solani AG8
by: Hane, James, et al.
Published: (2014)

The genome sequence of the biocontrol fungus Metarhizium anisopliae and comparative genomics of Metarhizium species.
by: Pattemore, J., et al.
Published: (2014)

Comparative genomics of the wheat fungal pathogen Pyrenophora tritici-repentis reveals chromosomal variations and genome plasticity
by: Moolhuijzen, Paula, et al.
Published: (2018)

OcculterCut: A comprehensive survey of AT-rich regions in fungal genomes.
by: Renwick, Alison, et al.
Published: (2016)

RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences
by: Hane, J., et al.
Published: (2008)

Calculating RIP mutation in fungal genomes using RIPCAL
by: Hane, James
Published: (2015)

CodingQuarry: Highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts
by: Testa, Alison, et al.
Published: (2015)

Analysis of conglutin seed storage proteins across lupin species using transcriptomic, protein and comparative genomic approaches
by: Foley, R., et al.
Published: (2015)

Comprehensive annotation of the Parastagonospora nodorum reference genome using next-generation genomics, transcriptomics and proteogenomics
by: Syme, Robert, et al.
Published: (2016)

Reference Genome Assembly for Australian Ascochyta rabiei Isolate ArME14
by: Shah, R.M., et al.
Published: (2020)

Construction of a comparative genetic map in faba bean (Vicia faba L.); conservation of genome structure with Lens culinaris
by: Ellwood, Simon, et al.
Published: (2008)

Comparative Genome Analysis of Enterobacter cloacae
by: Liu, Wing Yee, et al.
Published: (2013)

Genomic tillage and the harvest of fungal phytopathogens
by: Oliver, Richard
Published: (2012)

Comparative genomic analysis of the ‘pseudofungus’ Hyphochytrium catenoides
by: Leonard, Guy, et al.
Published: (2018)

Statistical analysis of genomic data : a new model for class prediction and inference
by: Jiang, Zhenyu
Published: (2011)

A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres
by: Ellwood, Simon, et al.
Published: (2010)

Comparative genomics reveals insights into avian genome evolution and adaptation
by: Zhang, G., et al.
Published: (2014)

Repeat-Induced Point Mutation in Fungi: A Fungal-Specific Endogenous Mutagenesis Process
by: Hane, James, et al.
Published: (2015)

Comparing yeast genome assemblies
by: Siow, Cheuk Chuen
Published: (2011)

Comparative genomics analysis of Ganoderma orthologs involved in plant-pathogenesis
by: Ho, Chai-Ling
Published: (2023)

Comparative genomics analysis of escherichia coli: insight into its pathogenicity
by: Ibrahim, Ahmed Farah Mohamed
Published: (2022)

Comparative Analysis of Class Reader Exercises: Approaches Of Writers
by: Chakrabarty, Leela
Published: (1998)

Virulence related sequences: insights provided by comparative genomics of Streptococcus uberis of differing virulence
by: Hossain, Maqsud, et al.
Published: (2015)

Evolution of Linked Avirulence Effectors in Leptosphaeria maculans Is Affected by Genomic Environment and Exposure to Resistance Genes in Host Plants
by: Van de Wouw, A., et al.
Published: (2010)

Comparative genomics of bacteriophage of the genus Seuratvirus
by: Sazinas, Pavelas, et al.
Published: (2017)

Comparative Genomics of Parastagonospora and Pyrenophora species
by: Syme, Robert Andrew
Published: (2015)

In silico reversal of repeat-induced point mutation (RIP) identifies the origins of repeat families and uncovers obscured duplicated genes.
by: Hane, J., et al.
Published: (2010)

Stagonospora nodorum: From pathology to genomics and host resistance
by: Oliver, Richard, et al.
Published: (2012)

Comparative genomics and prediction of conditionally dispensable sequences in legume–infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors
by: Williams, A., et al.
Published: (2016)

Sequencing and comparative genome analysis of streptococcus sanguinis and streptococcus gordonii / Zheng Wenning
by: Zheng, Wenning
Published: (2017)

Complete plastid genome of Coelostegia griffithii (Malvaceae): Structure, comparative and phylogenetic analysis
by: Wong, Xue Jing, et al.
Published: (2024)

Chromosome-level genome assembly and manually-curated proteome of model necrotroph Parastagonospora nodorum Sn15 reveals a genome-wide trove of candidate effector homologs, and redundancy of virulence-related functions within an accessory chromosome
by: Bertazzoni, Stefania, et al.
Published: (2021)

Comparing collaborative writing in class and on wiki
by: Ansarimoghaddam, Shokoufeh, et al.
Published: (2012)

Normalization of metabolites in heterogenous systems using genomics
by: Solomon, P., et al.
Published: (2006)