Atomistic simulations of the aggregation of small aromatic molecules in homogenous and heterogenous mixtures

The relatively weak London dispersion forces are the only interactions that could cause aggregation between simple aromatic molecules. The use of molecular dynamics and high-levelab initiocomputer simulations has been used to describe the aggregation and interactions between molecular systems contai...

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Main Authors: Thomas, M., Suarez-Martinez, Irene, Yu, L.J., Karton, A., Chandler, G.S., Robinson, M., Cherchneff, I., Talbi, D., Spagnoli, D.
Format: Journal Article
Language:English
Published: ROYAL SOC CHEMISTRY 2020
Subjects:
Online Access:https://europepmc.org/article/MED/32766637
http://hdl.handle.net/20.500.11937/90965
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author Thomas, M.
Suarez-Martinez, Irene
Yu, L.J.
Karton, A.
Chandler, G.S.
Robinson, M.
Cherchneff, I.
Talbi, D.
Spagnoli, D.
author_facet Thomas, M.
Suarez-Martinez, Irene
Yu, L.J.
Karton, A.
Chandler, G.S.
Robinson, M.
Cherchneff, I.
Talbi, D.
Spagnoli, D.
author_sort Thomas, M.
building Curtin Institutional Repository
collection Online Access
description The relatively weak London dispersion forces are the only interactions that could cause aggregation between simple aromatic molecules. The use of molecular dynamics and high-levelab initiocomputer simulations has been used to describe the aggregation and interactions between molecular systems containing benzene, naphthalene and anthracene. Mixtures containing one type of molecule (homogenous) and more than one type of molecule (heterogenous) were considered. Our results indicate that as molecular weight increases so does the temperature at which aggregation will occur. In all simulations, the mechanism of aggregation is through small clusters coalescing into larger clusters. The structural analysis of the molecules within the clusters reveals that benzene will orient itself in T-shaped and parallel displaced configurations. Molecules of anthracene prefer to orient themselves in a similar manner to a bulk crystal with no T-shaped configuration observed. The aggregation of these aromatic molecules is discussed in the context of astrochemistry with particular reference to the dust formation region around stars.
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institution Curtin University Malaysia
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language English
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publishDate 2020
publisher ROYAL SOC CHEMISTRY
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spelling curtin-20.500.11937-909652023-05-11T01:55:12Z Atomistic simulations of the aggregation of small aromatic molecules in homogenous and heterogenous mixtures Thomas, M. Suarez-Martinez, Irene Yu, L.J. Karton, A. Chandler, G.S. Robinson, M. Cherchneff, I. Talbi, D. Spagnoli, D. Science & Technology Physical Sciences Chemistry, Physical Physics, Atomic, Molecular & Chemical Chemistry Physics VAPOR-PRESSURE MEASUREMENTS PI-PI STACKING SOOT FORMATION FORCE-FIELD AB-INITIO HYDROCARBONS BENZENE PAHS NUCLEATION IRC+10216 The relatively weak London dispersion forces are the only interactions that could cause aggregation between simple aromatic molecules. The use of molecular dynamics and high-levelab initiocomputer simulations has been used to describe the aggregation and interactions between molecular systems containing benzene, naphthalene and anthracene. Mixtures containing one type of molecule (homogenous) and more than one type of molecule (heterogenous) were considered. Our results indicate that as molecular weight increases so does the temperature at which aggregation will occur. In all simulations, the mechanism of aggregation is through small clusters coalescing into larger clusters. The structural analysis of the molecules within the clusters reveals that benzene will orient itself in T-shaped and parallel displaced configurations. Molecules of anthracene prefer to orient themselves in a similar manner to a bulk crystal with no T-shaped configuration observed. The aggregation of these aromatic molecules is discussed in the context of astrochemistry with particular reference to the dust formation region around stars. 2020 Journal Article http://hdl.handle.net/20.500.11937/90965 10.1039/d0cp02622k English https://europepmc.org/article/MED/32766637 http://purl.org/au-research/grants/arc/FT140100191 ROYAL SOC CHEMISTRY fulltext
spellingShingle Science & Technology
Physical Sciences
Chemistry, Physical
Physics, Atomic, Molecular & Chemical
Chemistry
Physics
VAPOR-PRESSURE MEASUREMENTS
PI-PI STACKING
SOOT FORMATION
FORCE-FIELD
AB-INITIO
HYDROCARBONS
BENZENE
PAHS
NUCLEATION
IRC+10216
Thomas, M.
Suarez-Martinez, Irene
Yu, L.J.
Karton, A.
Chandler, G.S.
Robinson, M.
Cherchneff, I.
Talbi, D.
Spagnoli, D.
Atomistic simulations of the aggregation of small aromatic molecules in homogenous and heterogenous mixtures
title Atomistic simulations of the aggregation of small aromatic molecules in homogenous and heterogenous mixtures
title_full Atomistic simulations of the aggregation of small aromatic molecules in homogenous and heterogenous mixtures
title_fullStr Atomistic simulations of the aggregation of small aromatic molecules in homogenous and heterogenous mixtures
title_full_unstemmed Atomistic simulations of the aggregation of small aromatic molecules in homogenous and heterogenous mixtures
title_short Atomistic simulations of the aggregation of small aromatic molecules in homogenous and heterogenous mixtures
title_sort atomistic simulations of the aggregation of small aromatic molecules in homogenous and heterogenous mixtures
topic Science & Technology
Physical Sciences
Chemistry, Physical
Physics, Atomic, Molecular & Chemical
Chemistry
Physics
VAPOR-PRESSURE MEASUREMENTS
PI-PI STACKING
SOOT FORMATION
FORCE-FIELD
AB-INITIO
HYDROCARBONS
BENZENE
PAHS
NUCLEATION
IRC+10216
url https://europepmc.org/article/MED/32766637
https://europepmc.org/article/MED/32766637
http://hdl.handle.net/20.500.11937/90965