steps: Software for spatially and temporally explicit population simulations

Species population dynamics are driven by spatial and temporal changes in the environment, anthropogenic activities and conservation management actions. Understanding how populations will change in response to these drivers is fundamental to a wide range of ecological applications, but there are few...

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Main Authors: Visintin, C., Briscoe, N.J., Woolley, S.N.C., Lentini, P.E., Tingley, R., Wintle, B.A., Golding, Nick
Format: Journal Article
Language:English
Published: WILEY 2020
Subjects:
Online Access:http://purl.org/au-research/grants/arc/DE180100635
http://hdl.handle.net/20.500.11937/90764
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author Visintin, C.
Briscoe, N.J.
Woolley, S.N.C.
Lentini, P.E.
Tingley, R.
Wintle, B.A.
Golding, Nick
author_facet Visintin, C.
Briscoe, N.J.
Woolley, S.N.C.
Lentini, P.E.
Tingley, R.
Wintle, B.A.
Golding, Nick
author_sort Visintin, C.
building Curtin Institutional Repository
collection Online Access
description Species population dynamics are driven by spatial and temporal changes in the environment, anthropogenic activities and conservation management actions. Understanding how populations will change in response to these drivers is fundamental to a wide range of ecological applications, but there are few open-source software options accessible to researchers and managers that allow them to predict these changes in a flexible and transparent way. We introduce an open-source, multi-platform r package, steps, that models spatial changes in species populations as a function of drivers of distribution and abundance, such as climate, disturbance, landscape dynamics and species ecological and physiological requirements. To illustrate the functionality of steps, we model the population dynamics of the greater glider Petauroides volans, an arboreal Australian mammal. We demonstrate how steps can be used to simulate population responses of the glider to forest dynamics and management with the types of data commonly used in ecological analyses. steps expands on the features found in existing software packages, can easily incorporate a range of spatial layers (e.g. habitat suitability, vegetation dynamics and disturbances), facilitates integrated and transparent analyses within a single platform and produces interpretable outputs of changes in species' populations through space and time. Further, steps offers both ready-to-use, built-in functionality, as well as the ability for advanced users to define their own modules for custom analyses. Thus, we anticipate that steps will be of significant value to environment and wildlife managers and researchers from a broad range of disciplines.
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format Journal Article
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institution Curtin University Malaysia
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spelling curtin-20.500.11937-907642023-04-14T06:38:56Z steps: Software for spatially and temporally explicit population simulations Visintin, C. Briscoe, N.J. Woolley, S.N.C. Lentini, P.E. Tingley, R. Wintle, B.A. Golding, Nick Science & Technology Life Sciences & Biomedicine Ecology Environmental Sciences & Ecology demography ecological modelling habitat matrix models metapopulation population dynamics range shift Species Distribution Modelling CLIMATE-CHANGE LANDSCAPE VIABILITY DYNAMICS MODELS Species population dynamics are driven by spatial and temporal changes in the environment, anthropogenic activities and conservation management actions. Understanding how populations will change in response to these drivers is fundamental to a wide range of ecological applications, but there are few open-source software options accessible to researchers and managers that allow them to predict these changes in a flexible and transparent way. We introduce an open-source, multi-platform r package, steps, that models spatial changes in species populations as a function of drivers of distribution and abundance, such as climate, disturbance, landscape dynamics and species ecological and physiological requirements. To illustrate the functionality of steps, we model the population dynamics of the greater glider Petauroides volans, an arboreal Australian mammal. We demonstrate how steps can be used to simulate population responses of the glider to forest dynamics and management with the types of data commonly used in ecological analyses. steps expands on the features found in existing software packages, can easily incorporate a range of spatial layers (e.g. habitat suitability, vegetation dynamics and disturbances), facilitates integrated and transparent analyses within a single platform and produces interpretable outputs of changes in species' populations through space and time. Further, steps offers both ready-to-use, built-in functionality, as well as the ability for advanced users to define their own modules for custom analyses. Thus, we anticipate that steps will be of significant value to environment and wildlife managers and researchers from a broad range of disciplines. 2020 Journal Article http://hdl.handle.net/20.500.11937/90764 10.1111/2041-210X.13354 English http://purl.org/au-research/grants/arc/DE180100635 WILEY unknown
spellingShingle Science & Technology
Life Sciences & Biomedicine
Ecology
Environmental Sciences & Ecology
demography
ecological modelling
habitat
matrix models
metapopulation
population dynamics
range shift
Species Distribution Modelling
CLIMATE-CHANGE
LANDSCAPE
VIABILITY
DYNAMICS
MODELS
Visintin, C.
Briscoe, N.J.
Woolley, S.N.C.
Lentini, P.E.
Tingley, R.
Wintle, B.A.
Golding, Nick
steps: Software for spatially and temporally explicit population simulations
title steps: Software for spatially and temporally explicit population simulations
title_full steps: Software for spatially and temporally explicit population simulations
title_fullStr steps: Software for spatially and temporally explicit population simulations
title_full_unstemmed steps: Software for spatially and temporally explicit population simulations
title_short steps: Software for spatially and temporally explicit population simulations
title_sort steps: software for spatially and temporally explicit population simulations
topic Science & Technology
Life Sciences & Biomedicine
Ecology
Environmental Sciences & Ecology
demography
ecological modelling
habitat
matrix models
metapopulation
population dynamics
range shift
Species Distribution Modelling
CLIMATE-CHANGE
LANDSCAPE
VIABILITY
DYNAMICS
MODELS
url http://purl.org/au-research/grants/arc/DE180100635
http://hdl.handle.net/20.500.11937/90764