Noncovalent Interactions in SIESTA Using the vdW-DF Functional: S22 Benchmark and Macrocyclic Structures
We investigate the performance of the vdW-DF functional of Dion et al. implemented in the SIESTA code. In particular, the S22 data set and several calixarene-based host–guest structures are examined to assess the performance of the functional. The binding energy error statistics for the S22 data set...
| Main Authors: | Carter, Damien, Rohl, Andrew |
|---|---|
| Format: | Journal Article |
| Published: |
American Chemical Society
2012
|
| Online Access: | http://hdl.handle.net/20.500.11937/8090 |
Similar Items
SIESTA input and output files for calculations on the S22 data set
by: Carter, Damien, et al.
Published: (2011)
by: Carter, Damien, et al.
Published: (2011)
Benchmarking Calculated Lattice Parameters and Energies of Molecular Crystals Using van der Waals Density Functionals
by: Carter, Damien, et al.
Published: (2014)
by: Carter, Damien, et al.
Published: (2014)
The SIESTA method; developments and applicability
by: Artacho, E., et al.
Published: (2008)
by: Artacho, E., et al.
Published: (2008)
Can macrocyclic phosphonate molecules inhibit barium sulfate crystallization?
by: Radomirovic, T., et al.
Published: (2019)
by: Radomirovic, T., et al.
Published: (2019)
Macrocyclic peptides as inhibitors of protein-protein interactions
by: Smith, Frances
Published: (2020)
by: Smith, Frances
Published: (2020)
Detection and characterization of Coleus blumei viroid (CbVd)
by: Abdul Hamid, Siti Zaleha
Published: (2016)
by: Abdul Hamid, Siti Zaleha
Published: (2016)
Macrocyclic gelators
by: Goh, Ching, et al.
Published: (2013)
by: Goh, Ching, et al.
Published: (2013)
Enhanced Capacitance of a Nitrogen-containing Carbon-based Nanocomposite via Noncovalent Functionalization Method
by: Nur Izzatie Hannah, Razman, et al.
Published: (2015)
by: Nur Izzatie Hannah, Razman, et al.
Published: (2015)
SIESTA: A Linear-Scaling Method for Density Functional Calculations
by: Gale, Julian
Published: (2011)
by: Gale, Julian
Published: (2011)
Electronic Structure Calculations with Localized Orbitals: The Siesta Method
by: Gale, Julian, et al.
Published: (2005)
by: Gale, Julian, et al.
Published: (2005)
Studies on functionalised macrocyclic ligands
by: Tei, Lorenzo
Published: (2001)
by: Tei, Lorenzo
Published: (2001)
Calculated structures and energies of molecular crystals using dispersion corrected density functionals
by: Carter, Damien, et al.
Published: (2014)
by: Carter, Damien, et al.
Published: (2014)
The SIESTA method for ab initio order-N materials simulation
by: Gale, Julian, et al.
Published: (2002)
by: Gale, Julian, et al.
Published: (2002)
van der Waals corrected density functional calculations of the adsorption of benzene on the Cu (111) surface
by: Carter, Damien, et al.
Published: (2014)
by: Carter, Damien, et al.
Published: (2014)
Characterization of Coleus blumei viroid 5 (CbVd-5) from Coleus blumei in Malaysia
by: Zulkifli, Nurnajwa
Published: (2017)
by: Zulkifli, Nurnajwa
Published: (2017)
High-pressure studies of macrocycle coordination complexes
by: Tidey, Jeremiah P.
Published: (2016)
by: Tidey, Jeremiah P.
Published: (2016)
Macrocyclic alkanes: A new class of biomarker
by: Audino, Michiele, et al.
Published: (2001)
by: Audino, Michiele, et al.
Published: (2001)
Ab Initio Molecular Dynamics Simulations of (101) Surfaces of Potassium Dihydrogenphosphate
by: Carter, Damien, et al.
Published: (2011)
by: Carter, Damien, et al.
Published: (2011)
Input and selected output files for simulations of benzene adsorbed on the Cu (111) surface
by: Carter, Damien, et al.
Published: (2014)
by: Carter, Damien, et al.
Published: (2014)
Metal coordinated macrocyclic complexes in different chemical transformations
by: Thakur, Maheshwar S., et al.
Published: (2022)
by: Thakur, Maheshwar S., et al.
Published: (2022)
First principles calculations using density matrix divide-and-conquer within the SIESTA methodology
by: Cankurtaran, Burak O., et al.
Published: (2008)
by: Cankurtaran, Burak O., et al.
Published: (2008)
Functionalized indoles: hetero- and macrocyclization, coordination chemistry, and biological properties / Hamid Khaledi
by: Khaledi, Hamid
Published: (2012)
by: Khaledi, Hamid
Published: (2012)
Finite modeling of SAW resonator for DF-1 cells
by: Jamil, Nadira, et al.
Published: (2010)
by: Jamil, Nadira, et al.
Published: (2010)
Macrocyclic alkanes in crude oils from the algaenan of Botryococcus braunii
by: Audino, Michiele, et al.
Published: (2002)
by: Audino, Michiele, et al.
Published: (2002)
How to benchmark university-community interactions
by: Charles, David, et al.
Published: (2010)
by: Charles, David, et al.
Published: (2010)
The growth study of DF1 cell in microcarrier based bioreactor
by: Arifin, Mohd Azmir, et al.
Published: (2011)
by: Arifin, Mohd Azmir, et al.
Published: (2011)
Growth study of DF-1 cell line in microcarrier bioreactor
by: Arifin, Mohd Azmir, et al.
Published: (2008)
by: Arifin, Mohd Azmir, et al.
Published: (2008)
Ab Initio Simulations of the (101) Surfaces of Potassium Dihydrogenphosphate (KDP)
by: Carter, Damien, et al.
Published: (2006)
by: Carter, Damien, et al.
Published: (2006)
Mechanisms of Dye Incorporation into Potassium Sulfate: Computational and Experimental Studies
by: Carter, Damien, et al.
Published: (2007)
by: Carter, Damien, et al.
Published: (2007)
Computational methodology for chirality determination in the Soai reaction by crystals: γ-glycine
by: Carter, Damien, et al.
Published: (2012)
by: Carter, Damien, et al.
Published: (2012)
Input and selected output files for simulations of sunset yellow dimers
by: Carter, Damien, et al.
Published: (2014)
by: Carter, Damien, et al.
Published: (2014)
Experimental and Computational Studies of Incorporation of Cyano Transition Metal Complexes in Potassium Chloride Crystals
by: Carter, Damien, et al.
Published: (2003)
by: Carter, Damien, et al.
Published: (2003)
High pressure studies of palladium and platinum thioether macrocyclic dihalide complexes
by: Schröder, Martin
Published: (2014)
by: Schröder, Martin
Published: (2014)
Design, synthesis, and optimisation of highly selective macrocyclic CDK9 inhibitors
by: Gao, Rui
Published: (2018)
by: Gao, Rui
Published: (2018)
FUNCTIONAL RESTORATION OF DF508 CFTR IN PRIMARY CYSTIC FIBROSIS AIRWAY EPITHELIAL CELLS
by: Sutanto, E., et al.
Published: (2009)
by: Sutanto, E., et al.
Published: (2009)
Benchmarking of Bat-inspired Interaction Testing Strategy
by: Kamal Z., Zamli, et al.
Published: (2016)
by: Kamal Z., Zamli, et al.
Published: (2016)
Interactivity performance benchmark for Windows and Mac OS
by: Fan, Wei Cong
Published: (2020)
by: Fan, Wei Cong
Published: (2020)
Simulation of a surface transverse wave biosensor for DF-1 cells
by: Jamil, Nadira, et al.
Published: (2010)
by: Jamil, Nadira, et al.
Published: (2010)
The growth rate and viability of DF1 cell in different culture media
by: Arifin, Mohd Azmir, et al.
Published: (2011)
by: Arifin, Mohd Azmir, et al.
Published: (2011)
Macrocyclic alkanes in crude oils and sediment extracts: enrichment using molecular sieves
by: Audino, Michiele, et al.
Published: (2004)
by: Audino, Michiele, et al.
Published: (2004)
Similar Items
-
SIESTA input and output files for calculations on the S22 data set
by: Carter, Damien, et al.
Published: (2011) -
Benchmarking Calculated Lattice Parameters and Energies of Molecular Crystals Using van der Waals Density Functionals
by: Carter, Damien, et al.
Published: (2014) -
The SIESTA method; developments and applicability
by: Artacho, E., et al.
Published: (2008) -
Can macrocyclic phosphonate molecules inhibit barium sulfate crystallization?
by: Radomirovic, T., et al.
Published: (2019) -
Macrocyclic peptides as inhibitors of protein-protein interactions
by: Smith, Frances
Published: (2020)