Biogem: An effective tool-based approach for scaling up open source software development in bioinformatics
Summary: Biogem provides a software development environment for the Ruby programming language, which encourages community-based software development for bioinformatics while lowering the barrier to entry and encouraging best practices. Biogem, with its targeted modular and decentralized approach, so...
| Main Authors: | , , , , , , , , , , , , , , , , |
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| Format: | Journal Article |
| Published: |
2012
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| Online Access: | http://hdl.handle.net/20.500.11937/43400 |
| _version_ | 1848756680945303552 |
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| author | Bonnal, R. Aerts, J. Githinji, G. Goto, N. Maclean, D. Miller, C. Mishima, H. Pagani, M. Ramirez-gonzalez, R. Smant, G. Strozzi, F. Syme, Robert Vos, R. Wennblom, T. Woodcroft, B. Katayama, T. Prins, P. |
| author_facet | Bonnal, R. Aerts, J. Githinji, G. Goto, N. Maclean, D. Miller, C. Mishima, H. Pagani, M. Ramirez-gonzalez, R. Smant, G. Strozzi, F. Syme, Robert Vos, R. Wennblom, T. Woodcroft, B. Katayama, T. Prins, P. |
| author_sort | Bonnal, R. |
| building | Curtin Institutional Repository |
| collection | Online Access |
| description | Summary: Biogem provides a software development environment for the Ruby programming language, which encourages community-based software development for bioinformatics while lowering the barrier to entry and encouraging best practices. Biogem, with its targeted modular and decentralized approach, software generator, tools and tight web integration, is an improved general model for scaling up collaborative open source software development in bioinformatics. © The Author(s) 2012. Published by Oxford University Press. |
| first_indexed | 2025-11-14T09:16:03Z |
| format | Journal Article |
| id | curtin-20.500.11937-43400 |
| institution | Curtin University Malaysia |
| institution_category | Local University |
| last_indexed | 2025-11-14T09:16:03Z |
| publishDate | 2012 |
| recordtype | eprints |
| repository_type | Digital Repository |
| spelling | curtin-20.500.11937-434002017-09-13T14:00:16Z Biogem: An effective tool-based approach for scaling up open source software development in bioinformatics Bonnal, R. Aerts, J. Githinji, G. Goto, N. Maclean, D. Miller, C. Mishima, H. Pagani, M. Ramirez-gonzalez, R. Smant, G. Strozzi, F. Syme, Robert Vos, R. Wennblom, T. Woodcroft, B. Katayama, T. Prins, P. Summary: Biogem provides a software development environment for the Ruby programming language, which encourages community-based software development for bioinformatics while lowering the barrier to entry and encouraging best practices. Biogem, with its targeted modular and decentralized approach, software generator, tools and tight web integration, is an improved general model for scaling up collaborative open source software development in bioinformatics. © The Author(s) 2012. Published by Oxford University Press. 2012 Journal Article http://hdl.handle.net/20.500.11937/43400 10.1093/bioinformatics/bts080 unknown |
| spellingShingle | Bonnal, R. Aerts, J. Githinji, G. Goto, N. Maclean, D. Miller, C. Mishima, H. Pagani, M. Ramirez-gonzalez, R. Smant, G. Strozzi, F. Syme, Robert Vos, R. Wennblom, T. Woodcroft, B. Katayama, T. Prins, P. Biogem: An effective tool-based approach for scaling up open source software development in bioinformatics |
| title | Biogem: An effective tool-based approach for scaling up open source software development in bioinformatics |
| title_full | Biogem: An effective tool-based approach for scaling up open source software development in bioinformatics |
| title_fullStr | Biogem: An effective tool-based approach for scaling up open source software development in bioinformatics |
| title_full_unstemmed | Biogem: An effective tool-based approach for scaling up open source software development in bioinformatics |
| title_short | Biogem: An effective tool-based approach for scaling up open source software development in bioinformatics |
| title_sort | biogem: an effective tool-based approach for scaling up open source software development in bioinformatics |
| url | http://hdl.handle.net/20.500.11937/43400 |