Whole-genome sequencing and social-network analysis of a tuberculosis outbreak
Background: An outbreak of tuberculosis occurred over a 3-year period in a medium-size community in British Columbia, Canada. The results of mycobacterial interspersed repetitive unit-variable-number tandem-repeat (MIRU-VNTR) genotyping suggested the outbreak was clonal. Traditional contact tracing...
| Main Authors: | Gardy, J., Johnston, J., Ho Sui, S., Cook, V., Shah, L., Brodkin, E., Rempel, S., Moore, R., Zhao, Y., Holt, R., Varhol, Richard, Birol, I., Lem, M., Sharma, M., Elwood, K., Jones, S., Brinkman, F., Brunham, R., Tang, P. |
|---|---|
| Format: | Journal Article |
| Published: |
2011
|
| Online Access: | http://hdl.handle.net/20.500.11937/39071 |
Similar Items
Models and methods to integrate epidemiological and whole genome sequence data for effectively analysing infectious disease outbreak data
by: Marsh, J. S.
Published: (2024)
by: Marsh, J. S.
Published: (2024)
Understanding the genomic information of mycobacterium tuberculosis causing whole genome sequencing approach / Nur Azwin Ismail
by: Ismail, Nur Azwin
Published: (2015)
by: Ismail, Nur Azwin
Published: (2015)
Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit
by: Dickinson, Harriet, et al.
Published: (2018)
by: Dickinson, Harriet, et al.
Published: (2018)
Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples
by: Votintseva, Antonina A., et al.
Published: (2017)
by: Votintseva, Antonina A., et al.
Published: (2017)
The Medical Genome Reference Bank contains whole genome and phenotype data of 2570 healthy elderly
by: Pinese, M., et al.
Published: (2020)
by: Pinese, M., et al.
Published: (2020)
Investigation using whole genome sequencing of a prolonged restaurant outbreak of Salmonella typhimurium linked to the building drainage system, England, February 2015 to March 2016
by: Mair-Jenkins, John, et al.
Published: (2017)
by: Mair-Jenkins, John, et al.
Published: (2017)
Whole genomes redefine the mutational landscape of pancreatic cancer
by: Waddell, N., et al.
Published: (2015)
by: Waddell, N., et al.
Published: (2015)
Genomic Diversity of Cholera Outbreak Strains in East Malaysia
by: Lesley Maurice, Bilung, et al.
Published: (2014)
by: Lesley Maurice, Bilung, et al.
Published: (2014)
Young adults’ considerations for whole genome sequencing
by: Barnard, Pepita M.
Published: (2021)
by: Barnard, Pepita M.
Published: (2021)
Application of whole genome sequencing to the study of Pseudomonas aeruginosa
by: Naghra, H
Published: (2016)
by: Naghra, H
Published: (2016)
Statistical inference and modelling for nosocomial infections and the incorporation of whole genome sequence data
by: Worby, Colin J.
Published: (2013)
by: Worby, Colin J.
Published: (2013)
Whole-genome analyses resolve early branches in the tree of life of modern birds
by: Jarvis, E., et al.
Published: (2014)
by: Jarvis, E., et al.
Published: (2014)
Comparative genomic analysis of Mycobacterium tuberculosis in lung and meningeal tuberculosis / Syakirah Nurizzati Mohamad Hood
by: Syakirah Nurizzati , Mohamad Hood
Published: (2019)
by: Syakirah Nurizzati , Mohamad Hood
Published: (2019)
Whole genome sequence and manual annotation of Clostridium autoethanogenum, an industrially relevant bacterium
by: Humphreys, Christopher M., et al.
Published: (2015)
by: Humphreys, Christopher M., et al.
Published: (2015)
Characterisation of Staphylococcus felis isolated from cats using whole genome sequencing
by: Worthing, K., et al.
Published: (2018)
by: Worthing, K., et al.
Published: (2018)
Whole genome sequencing, comparative genomics and virulence factors analyses of Meyerozyma guilliermondii strain soexpression system
by: Zainudin, Robiatul Azilah
Published: (2021)
by: Zainudin, Robiatul Azilah
Published: (2021)
Inference of transmission trees for epidemics using whole-genome sequence data
by: Cassidy, Rosanna
Published: (2019)
by: Cassidy, Rosanna
Published: (2019)
Longitudinal data analysis for genetic studies in the whole-genome sequencing era.
by: Wu, Z., et al.
Published: (2014)
by: Wu, Z., et al.
Published: (2014)
Pooled whole-genome sequencing reveals molecular signatures of natural adaptive selection in Djallonke sheep of Ghana.
by: Yaro, M., et al.
Published: (2016)
by: Yaro, M., et al.
Published: (2016)
Resolving intergeneric relationships in the aervoid clade and the backbone of Ptilotus (Amaranthaceae): evidence from whole plastid genomes and morphology
by: Hammer, T. A., et al.
Published: (2019)
by: Hammer, T. A., et al.
Published: (2019)
Whole genome sequencing and analysis on the trios of the Che Wong and Semai:understanding the medico-genomic association / Rose Iszati Ismet Nayan
by: Ismet Nayan, Rose Iszati
Published: (2017)
by: Ismet Nayan, Rose Iszati
Published: (2017)
Whole genome sequencing and analysis on the trios of the Che Wong and Semai: understanding the medico-genomic association / Rose Iszati Ismet Nayan
by: Ismet Nayan, Rose Iszati
Published: (2017)
by: Ismet Nayan, Rose Iszati
Published: (2017)
Complete genomic landscape of a recurring sporadic parathyroid carcinoma
by: Kasaian, K., et al.
Published: (2013)
by: Kasaian, K., et al.
Published: (2013)
A generic assay for whole-genome amplification and deep sequencingof enterovirus A71
by: Le, Van Tan, et al.
Published: (2015)
by: Le, Van Tan, et al.
Published: (2015)
A generic assay for whole-genome amplification and deep sequencing of enterovirus A71
by: Tan, Le Van, et al.
Published: (2015)
by: Tan, Le Van, et al.
Published: (2015)
A generic assay for whole-genome amplification and deep sequencing of enterovirus A71
by: Le Van, Tan, et al.
Published: (2015)
by: Le Van, Tan, et al.
Published: (2015)
Pulling out the 1%: Whole-Genome Capture for the Targeted Enrichment of Ancient DNA Sequencing Libraries
by: Carpenter, M., et al.
Published: (2013)
by: Carpenter, M., et al.
Published: (2013)
The Global Outbreak Alert and Response Network
by: Mackenzie, John, et al.
Published: (2014)
by: Mackenzie, John, et al.
Published: (2014)
Genomic structural equation modelling provides a whole-system approach for the future crop breeding.
by: He, Tianhua, et al.
Published: (2021)
by: He, Tianhua, et al.
Published: (2021)
Whole genome sequencing of Priestia megaterium isolated from the gut of sea cucumber (Holothuria leucospilota)
by: Darren Dean, Tay, et al.
Published: (2023)
by: Darren Dean, Tay, et al.
Published: (2023)
Whole Genome Sequencing For Establishment Of Phylogenetic Position And Discovery Of Miniaturization And Lipid Metabolism Genes In Paedocypris
by: Sam, Ka Kei
Published: (2022)
by: Sam, Ka Kei
Published: (2022)
The future of tuberculosis vaccinology
by: Griffin, R., et al.
Published: (2006)
by: Griffin, R., et al.
Published: (2006)
Investigating Outbreaks
by: Plant, Aileen
Published: (2008)
by: Plant, Aileen
Published: (2008)
Dissecting the genomics structure of proteus mirabilis strain PR03 using whole genome sequencing approach / Mohd Ikhmal Hanif Abdul Khalid
by: Abdul Khalid, Mohd Ikhmal Hanif
Published: (2014)
by: Abdul Khalid, Mohd Ikhmal Hanif
Published: (2014)
Managing the public during the nipah virus outbreak in Negeri Sembilan
by: Ramlee R.,
Published: (2000)
by: Ramlee R.,
Published: (2000)
The future of tuberculosis vaccinology
by: Thole, Jelle, et al.
Published: (2009)
by: Thole, Jelle, et al.
Published: (2009)
Influenza Pandemic Outbreaks: Conducting Focus Groups with Rural Communities in Baram, Sarawak
by: Wah, C.R.J, et al.
Published: (2013)
by: Wah, C.R.J, et al.
Published: (2013)
Nanopore adaptive sequencing of gigabase length genomes for mixed samples, whole exome capture, and targeted panels
by: Payne, Stuart Alexander
Published: (2022)
by: Payne, Stuart Alexander
Published: (2022)
Whole-genome sequence of a stenotrophomonas maltophilia isolate from tap water in an intensive care unit
by: Ummu Afeera, Zainulabid, et al.
Published: (2023)
by: Ummu Afeera, Zainulabid, et al.
Published: (2023)
Whole genome sequencing of Streptococcus suis revealed potential drug resistance and zoonotic transmission in companion cat
by: Lee, C.Y., et al.
Published: (2024)
by: Lee, C.Y., et al.
Published: (2024)
Similar Items
-
Models and methods to integrate epidemiological and whole genome sequence data for effectively analysing infectious disease outbreak data
by: Marsh, J. S.
Published: (2024) -
Understanding the genomic information of mycobacterium tuberculosis causing whole genome sequencing approach / Nur Azwin Ismail
by: Ismail, Nur Azwin
Published: (2015) -
Whole genome sequencing in the investigation of recurrent invasive Group A streptococcus outbreaks in a maternity unit
by: Dickinson, Harriet, et al.
Published: (2018) -
Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples
by: Votintseva, Antonina A., et al.
Published: (2017) -
The Medical Genome Reference Bank contains whole genome and phenotype data of 2570 healthy elderly
by: Pinese, M., et al.
Published: (2020)