Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia
Burkholderia sp. strain WSM2232 is an aerobic, motile, Gram-negative, non-spore-forming acid-tolerant rod that was trapped in 2001 from acidic soil collected from Karijini National Park (Australia) using Gastrolobium capitatum as a host. WSM2232 was effective in nitrogen fixation with G. capitatum b...
| Main Authors: | , , , , , , , , , , , , , , , |
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| Format: | Journal Article |
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Michigan State University
2014
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| Online Access: | http://hdl.handle.net/20.500.11937/32353 |
| _version_ | 1848753639950123008 |
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| author | Walker, R. Watkin, Elizabeth Tian, R. Brau, L. O'Hara, G. Goodwin, L. Han, J. Reddy, T. Huntemann, M. Pati, A. Woyke, T. mavrommatis, K. Markowitz, V. Ivanova, N. Kyrpides, N. Reeve, W. |
| author_facet | Walker, R. Watkin, Elizabeth Tian, R. Brau, L. O'Hara, G. Goodwin, L. Han, J. Reddy, T. Huntemann, M. Pati, A. Woyke, T. mavrommatis, K. Markowitz, V. Ivanova, N. Kyrpides, N. Reeve, W. |
| author_sort | Walker, R. |
| building | Curtin Institutional Repository |
| collection | Online Access |
| description | Burkholderia sp. strain WSM2232 is an aerobic, motile, Gram-negative, non-spore-forming acid-tolerant rod that was trapped in 2001 from acidic soil collected from Karijini National Park (Australia) using Gastrolobium capitatum as a host. WSM2232 was effective in nitrogen fixation with G. capitatum but subsequently lost symbiotic competence during long-term storage. Here we describe the features of Burkholderia sp. strain WSM2232, together with genome sequence information and its annotation. The 7,208,311 bp standard-draft genome is arranged into 72 scaffolds of 72 contigs containing 6,322 protein-coding genes and 61 RNA-only encoding genes. The loss of symbiotic capability can now be attributed to the loss of nodulation and nitrogen fixation genes from the genome. This rhizobial genome is one of 100 sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacte-ria and Archaea-Root Nodule Bacteria (GEBA-RNB) project. |
| first_indexed | 2025-11-14T08:27:43Z |
| format | Journal Article |
| id | curtin-20.500.11937-32353 |
| institution | Curtin University Malaysia |
| institution_category | Local University |
| last_indexed | 2025-11-14T08:27:43Z |
| publishDate | 2014 |
| publisher | Michigan State University |
| recordtype | eprints |
| repository_type | Digital Repository |
| spelling | curtin-20.500.11937-323532017-09-13T15:23:29Z Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia Walker, R. Watkin, Elizabeth Tian, R. Brau, L. O'Hara, G. Goodwin, L. Han, J. Reddy, T. Huntemann, M. Pati, A. Woyke, T. mavrommatis, K. Markowitz, V. Ivanova, N. Kyrpides, N. Reeve, W. rhizobia Betaproteobacteria root-nodule bacteria nitrogen fixation Burkholderia sp. strain WSM2232 is an aerobic, motile, Gram-negative, non-spore-forming acid-tolerant rod that was trapped in 2001 from acidic soil collected from Karijini National Park (Australia) using Gastrolobium capitatum as a host. WSM2232 was effective in nitrogen fixation with G. capitatum but subsequently lost symbiotic competence during long-term storage. Here we describe the features of Burkholderia sp. strain WSM2232, together with genome sequence information and its annotation. The 7,208,311 bp standard-draft genome is arranged into 72 scaffolds of 72 contigs containing 6,322 protein-coding genes and 61 RNA-only encoding genes. The loss of symbiotic capability can now be attributed to the loss of nodulation and nitrogen fixation genes from the genome. This rhizobial genome is one of 100 sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacte-ria and Archaea-Root Nodule Bacteria (GEBA-RNB) project. 2014 Journal Article http://hdl.handle.net/20.500.11937/32353 10.4056/sigs.5018795 Michigan State University fulltext |
| spellingShingle | rhizobia Betaproteobacteria root-nodule bacteria nitrogen fixation Walker, R. Watkin, Elizabeth Tian, R. Brau, L. O'Hara, G. Goodwin, L. Han, J. Reddy, T. Huntemann, M. Pati, A. Woyke, T. mavrommatis, K. Markowitz, V. Ivanova, N. Kyrpides, N. Reeve, W. Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia |
| title | Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia |
| title_full | Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia |
| title_fullStr | Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia |
| title_full_unstemmed | Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia |
| title_short | Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia |
| title_sort | genome sequence of the acid-tolerant burkholderia sp. strain wsm2232 from karijini national park, australia |
| topic | rhizobia Betaproteobacteria root-nodule bacteria nitrogen fixation |
| url | http://hdl.handle.net/20.500.11937/32353 |