Identifying conservation units after large-scale land clearing: a spatio-temporal molecular survey of endangered white-tailed black cockatoos (Calyptorhynchus spp.)

Aim: We examined how the threatened and endemic white-tailed black cockatoos of Western Australia have responded genetically to recent and comprehensive habitat loss with the ultimate aim of identifying units for conservation. We assessed the population structure, connectivity and genetic diversity...

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Main Authors: White, Nicole, Bunce, Michael, Mawson, P., Dawson, R., Saunders, D., Allentoft, M.
Format: Journal Article
Published: Blackwell Science Ltd 2014
Subjects:
Online Access:http://hdl.handle.net/20.500.11937/28201
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author White, Nicole
Bunce, Michael
Mawson, P.
Dawson, R.
Saunders, D.
Allentoft, M.
author_facet White, Nicole
Bunce, Michael
Mawson, P.
Dawson, R.
Saunders, D.
Allentoft, M.
author_sort White, Nicole
building Curtin Institutional Repository
collection Online Access
description Aim: We examined how the threatened and endemic white-tailed black cockatoos of Western Australia have responded genetically to recent and comprehensive habitat loss with the ultimate aim of identifying units for conservation. We assessed the population structure, connectivity and genetic diversity at spatial and temporal scales for Calyptorhynchus baudinii and C. latirostris, which have undergone dramatic population declines. Genetic comparisons of pre- and post-population decline were carried out by including historical samples dating back to 1920. We examined samples collected from across 700 km of their distribution and sampled approximately 1% of the current population census size to produce significant insights into the population genetics of white-tailed black cockatoos and generate genetic information crucial for conservation management. Location: Southwest corner of Western Australia. Methods: Six hundred and eighty-four cockatoo samples were collected from 1920 to 2010 and profiled with 19 microsatellites to identify spatial population structure and loss of genetic diversity.Results: The temporal and spatial microsatellite data illustrated that the geographically defined genetic structuring in white-tailed black cockatoos is likely to represent a recent phenomenon. We identified: (1) spatial population substructure east and west of extensively cleared habitat (>95,800 km2), but the historical samples clustered with the current western population, regardless of origin, (2) a regional loss of allelic diversity over 3–4 generations for the current eastern population, (3) a lack of a genetic signal of the recent population decline, but perhaps a mid-Holocene population collapse and lastly, (4) limited genetic differentiation between the two currently recognized white-tailed black-cockatoo species suggests a review of taxonomy and/or management units should be undertaken. Main conclusion: Based on extensive spatio-temporal sampling, we have demonstrated that recent anthropogenic habitat modifications have affected the genetic structure of a long-lived and highly mobile species. Our results have identified areas of high conservation value and the importance of maintaining native vegetation migration corridors.
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spelling curtin-20.500.11937-282012019-02-19T05:35:34Z Identifying conservation units after large-scale land clearing: a spatio-temporal molecular survey of endangered white-tailed black cockatoos (Calyptorhynchus spp.) White, Nicole Bunce, Michael Mawson, P. Dawson, R. Saunders, D. Allentoft, M. population structure Calyptorhynchus historical sampling cockatoos Southwest Australia Ancient DNA microsatellites habitat fragmentation Aim: We examined how the threatened and endemic white-tailed black cockatoos of Western Australia have responded genetically to recent and comprehensive habitat loss with the ultimate aim of identifying units for conservation. We assessed the population structure, connectivity and genetic diversity at spatial and temporal scales for Calyptorhynchus baudinii and C. latirostris, which have undergone dramatic population declines. Genetic comparisons of pre- and post-population decline were carried out by including historical samples dating back to 1920. We examined samples collected from across 700 km of their distribution and sampled approximately 1% of the current population census size to produce significant insights into the population genetics of white-tailed black cockatoos and generate genetic information crucial for conservation management. Location: Southwest corner of Western Australia. Methods: Six hundred and eighty-four cockatoo samples were collected from 1920 to 2010 and profiled with 19 microsatellites to identify spatial population structure and loss of genetic diversity.Results: The temporal and spatial microsatellite data illustrated that the geographically defined genetic structuring in white-tailed black cockatoos is likely to represent a recent phenomenon. We identified: (1) spatial population substructure east and west of extensively cleared habitat (>95,800 km2), but the historical samples clustered with the current western population, regardless of origin, (2) a regional loss of allelic diversity over 3–4 generations for the current eastern population, (3) a lack of a genetic signal of the recent population decline, but perhaps a mid-Holocene population collapse and lastly, (4) limited genetic differentiation between the two currently recognized white-tailed black-cockatoo species suggests a review of taxonomy and/or management units should be undertaken. Main conclusion: Based on extensive spatio-temporal sampling, we have demonstrated that recent anthropogenic habitat modifications have affected the genetic structure of a long-lived and highly mobile species. Our results have identified areas of high conservation value and the importance of maintaining native vegetation migration corridors. 2014 Journal Article http://hdl.handle.net/20.500.11937/28201 10.1111/ddi.12202 Blackwell Science Ltd fulltext
spellingShingle population structure
Calyptorhynchus
historical sampling
cockatoos
Southwest Australia
Ancient DNA
microsatellites
habitat fragmentation
White, Nicole
Bunce, Michael
Mawson, P.
Dawson, R.
Saunders, D.
Allentoft, M.
Identifying conservation units after large-scale land clearing: a spatio-temporal molecular survey of endangered white-tailed black cockatoos (Calyptorhynchus spp.)
title Identifying conservation units after large-scale land clearing: a spatio-temporal molecular survey of endangered white-tailed black cockatoos (Calyptorhynchus spp.)
title_full Identifying conservation units after large-scale land clearing: a spatio-temporal molecular survey of endangered white-tailed black cockatoos (Calyptorhynchus spp.)
title_fullStr Identifying conservation units after large-scale land clearing: a spatio-temporal molecular survey of endangered white-tailed black cockatoos (Calyptorhynchus spp.)
title_full_unstemmed Identifying conservation units after large-scale land clearing: a spatio-temporal molecular survey of endangered white-tailed black cockatoos (Calyptorhynchus spp.)
title_short Identifying conservation units after large-scale land clearing: a spatio-temporal molecular survey of endangered white-tailed black cockatoos (Calyptorhynchus spp.)
title_sort identifying conservation units after large-scale land clearing: a spatio-temporal molecular survey of endangered white-tailed black cockatoos (calyptorhynchus spp.)
topic population structure
Calyptorhynchus
historical sampling
cockatoos
Southwest Australia
Ancient DNA
microsatellites
habitat fragmentation
url http://hdl.handle.net/20.500.11937/28201