Computational Methods for the Prediction of the Structure and Interactions of Coiled-Coil Peptides
The past several years have seen significant advances in the development of computational methods for the prediction of the structure and interactions of coiled-coil peptides. These methods are generally based on pairwise correlations of amino acids, helical propensity, thermal melts and the energet...
| Main Authors: | Gandhi, Neha, Mancera, Ricardo |
|---|---|
| Format: | Journal Article |
| Published: |
Bentham Science Publishers Limited
2008
|
| Online Access: | http://hdl.handle.net/20.500.11937/27216 |
Similar Items
Calculations of the free energy of interaction of the cFos-cJun coiled coil: effects of the solvation model and the inclusion of polarization effects
by: Zuo, Zhili, et al.
Published: (2010)
by: Zuo, Zhili, et al.
Published: (2010)
Free energy of binding of coiled-coil complexes with different electrostatic environments: the influence of force field polarisation and capping
by: Zhuo, Z., et al.
Published: (2014)
by: Zhuo, Z., et al.
Published: (2014)
Molecular dynamics simulations of CXCL-8 and its interactions with a receptor peptide, heparin fragments and sulfated cyclitols.
by: Gandhi, Neha, et al.
Published: (2011)
by: Gandhi, Neha, et al.
Published: (2011)
The Structure of Glycosaminoglycans and their Interactions with Proteins
by: Gandhi, Neha, et al.
Published: (2008)
by: Gandhi, Neha, et al.
Published: (2008)
Molecular level investigations of coiled-coil proteins
by: Johnson, Daniel
Published: (2006)
by: Johnson, Daniel
Published: (2006)
Free Energy Calculations of the Interactions of c-Jun-based Synthetic Peptides with the c-Fos Protein
by: Zuo, Zhili, et al.
Published: (2012)
by: Zuo, Zhili, et al.
Published: (2012)
Coiled coil type neoglycoproteins presenting three lactose residues
by: Sweeney, Sinclair M., et al.
Published: (2016)
by: Sweeney, Sinclair M., et al.
Published: (2016)
Free energy calculations of glycosaminoglycan-protein interactions
by: Gandhi, Neha, et al.
Published: (2009)
by: Gandhi, Neha, et al.
Published: (2009)
Molecular dynamics simulation of the phosphorylation-induced conformational changes of a tau peptide fragment
by: Lyons, Albert, et al.
Published: (2014)
by: Lyons, Albert, et al.
Published: (2014)
Prediction of heparin binding sites in bone morphogenetic proteins (BMPs)
by: Gandhi, Neha, et al.
Published: (2012)
by: Gandhi, Neha, et al.
Published: (2012)
Atomistic molecular dynamics simulations of bioactive engrailed 1 interference peptides (EN1-iPeps)
by: Gandhi, Neha, et al.
Published: (2018)
by: Gandhi, Neha, et al.
Published: (2018)
Coil winding machine
by: Sarina, Shafie
Published: (2013)
by: Sarina, Shafie
Published: (2013)
Simulation analysis of micro coils for the fabrication of micro-scaled search coil magnetometer
by: Tengku Azmi, Tengku Muhammad Afif, et al.
Published: (2016)
by: Tengku Azmi, Tengku Muhammad Afif, et al.
Published: (2016)
Interlaminar modelling to predict composite coiled tube failure
by: Mishani, S., et al.
Published: (2015)
by: Mishani, S., et al.
Published: (2015)
Physical characteristic analysis of solenoid-based coil structure
by: Sulaiman, Nadzril, et al.
Published: (2012)
by: Sulaiman, Nadzril, et al.
Published: (2012)
Location dependent coordination chemistry and MRI relaxivity, in de novo designed lanthanide coiled coils
by: Berwick, Matthew R., et al.
Published: (2015)
by: Berwick, Matthew R., et al.
Published: (2015)
Calcium ions as bioinspired triggers to reversibly control the coil-to-helix transition in peptide-polymer conjugates
by: Kühnle, R., et al.
Published: (2011)
by: Kühnle, R., et al.
Published: (2011)
Computational analyses of the catalytic and heparin binding sites and their interactions with glycosaminoglycans in glycoside hydrolase family 79 endo-β-D-glucuronidase (heparanase)
by: Gandhi, Neha, et al.
Published: (2012)
by: Gandhi, Neha, et al.
Published: (2012)
Energy Transmission via Coupled Coils
by: Howard, Roy, et al.
Published: (2008)
by: Howard, Roy, et al.
Published: (2008)
Magnetic field simulation of golay coil
by: Ahmad, Rashdi Shah, et al.
Published: (2008)
by: Ahmad, Rashdi Shah, et al.
Published: (2008)
Mosquito coil emissions and health implications
by: Liu, Weili, et al.
Published: (2003)
by: Liu, Weili, et al.
Published: (2003)
Platelet endothelial cell adhesion molecule (PECAM-1) and its interactions with glycosaminoglycans 1. Molecular modelling studies
by: Gandhi, Neha, et al.
Published: (2008)
by: Gandhi, Neha, et al.
Published: (2008)
Development and application of site mapping methods for the design of glycosaminoglycans
by: Agostino, Mark, et al.
Published: (2014)
by: Agostino, Mark, et al.
Published: (2014)
Effect of inductive coil shape on sensing performance of linear displacement sensor using thin inductive coil and pattern guide
by: Misron, Norhisam, et al.
Published: (2011)
by: Misron, Norhisam, et al.
Published: (2011)
Developing drugs from sugars: current state of glycosaminoglycan-derived therapeutics
by: Gandhi, Neha, et al.
Published: (2012)
by: Gandhi, Neha, et al.
Published: (2012)
Heparin/heparan sulphate-based drugs
by: Gandhi, Neha, et al.
Published: (2010)
by: Gandhi, Neha, et al.
Published: (2010)
Can current force fields reproduce ring puckering in 2-O-sulfo-?-L-iduronic acid? A molecular dynamics simulation study
by: Gandhi, Neha, et al.
Published: (2010)
by: Gandhi, Neha, et al.
Published: (2010)
Design analysis of single layer coupled coils
by: Yunas, Jumril, et al.
Published: (2010)
by: Yunas, Jumril, et al.
Published: (2010)
The coiled tubing drilling rig for mineral exploration
by: Soe, S., et al.
Published: (2018)
by: Soe, S., et al.
Published: (2018)
Coil windings determination using genetic algorithm
by: Aibinu, Abiodun Musa, et al.
Published: (2011)
by: Aibinu, Abiodun Musa, et al.
Published: (2011)
Solution for instability in magnetizing of toroidial coil winding
by: Ahmad Azwan, Abdul Razak
Published: (2016)
by: Ahmad Azwan, Abdul Razak
Published: (2016)
The effect of number of coils on electromagnetic for energy harvester
by: Noor Aifadilah, Junoh
Published: (2012)
by: Noor Aifadilah, Junoh
Published: (2012)
Rogowski Coil Sensor For Partial Discharge Detection
by: Murugaiah, Puovin
Published: (2018)
by: Murugaiah, Puovin
Published: (2018)
Investigations on physical characteristics of three-dimensional coil structure for MEMS magnetometer
by: Sulaiman, Nadzril, et al.
Published: (2013)
by: Sulaiman, Nadzril, et al.
Published: (2013)
Investigation of aluminum cooling coil in condenser application using computational fluid dynamic (CFD)
by: Mohd Hairul Nizam, Mohamed
Published: (2008)
by: Mohd Hairul Nizam, Mohamed
Published: (2008)
Cuttings transportation in coiled tubing drilling for mineral exploration
by: Kamyab, Mohammadreza
Published: (2014)
by: Kamyab, Mohammadreza
Published: (2014)
Geometrical analysis of planar coil design for fluxgate
magnetometer
by: Yunas, Jumril, et al.
Published: (2010)
by: Yunas, Jumril, et al.
Published: (2010)
Radiofrequency coils for ultra-high field body MRI
by: Farhat, Sedig
Published: (2013)
by: Farhat, Sedig
Published: (2013)
Utilizing Coiled tube rig for mineral exploration application
by: Roufail, R., et al.
Published: (2013)
by: Roufail, R., et al.
Published: (2013)
Functional outcome of microsurgical clipping compared to endovascular coiling
by: Premananda Raja , Murugesu
Published: (2011)
by: Premananda Raja , Murugesu
Published: (2011)
Similar Items
-
Calculations of the free energy of interaction of the cFos-cJun coiled coil: effects of the solvation model and the inclusion of polarization effects
by: Zuo, Zhili, et al.
Published: (2010) -
Free energy of binding of coiled-coil complexes with different electrostatic environments: the influence of force field polarisation and capping
by: Zhuo, Z., et al.
Published: (2014) -
Molecular dynamics simulations of CXCL-8 and its interactions with a receptor peptide, heparin fragments and sulfated cyclitols.
by: Gandhi, Neha, et al.
Published: (2011) -
The Structure of Glycosaminoglycans and their Interactions with Proteins
by: Gandhi, Neha, et al.
Published: (2008) -
Molecular level investigations of coiled-coil proteins
by: Johnson, Daniel
Published: (2006)