Advances in protein ontology project
Advances in proteomics and protein expression techniques have lead to the elucidation of large amounts of protein data. Various data mining algorithms and mathematical models provide methods for analyzing this data; however, there are two issues that need to be addressed: (1) the need for standards...
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| Format: | Conference Paper |
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IEEE Computer Society Press
2006
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| Online Access: | http://hdl.handle.net/20.500.11937/12084 |
| _version_ | 1848747979550228480 |
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| author | Sidhu, Amandeep Dillon, Tharam S. Chang, Elizabeth |
| author2 | Lee, D.J. |
| author_facet | Lee, D.J. Sidhu, Amandeep Dillon, Tharam S. Chang, Elizabeth |
| author_sort | Sidhu, Amandeep |
| building | Curtin Institutional Repository |
| collection | Online Access |
| description | Advances in proteomics and protein expression techniques have lead to the elucidation of large amounts of protein data. Various data mining algorithms and mathematical models provide methods for analyzing this data; however, there are two issues that need to be addressed: (1) the need for standards for defining protein data description and exchange formats so they can be exchanged across the World Wide Web, and also read into data mining software in a consistent format and (2) eliminating errors which arise with the data integration methodologies for complex queries. Protein Ontology is designed to meet these needs by providing a structured protein data specification for Protein Data Representation. Protein Ontology is a standard for representing protein data in a way that helps in defining data integration and data mining models for Protein Structure and Function. In this paper we summarize the structure of Protein Ontology we developed earlier, its current applications to various protein families, and its future development. |
| first_indexed | 2025-11-14T06:57:45Z |
| format | Conference Paper |
| id | curtin-20.500.11937-12084 |
| institution | Curtin University Malaysia |
| institution_category | Local University |
| last_indexed | 2025-11-14T06:57:45Z |
| publishDate | 2006 |
| publisher | IEEE Computer Society Press |
| recordtype | eprints |
| repository_type | Digital Repository |
| spelling | curtin-20.500.11937-120842022-10-20T07:14:59Z Advances in protein ontology project Sidhu, Amandeep Dillon, Tharam S. Chang, Elizabeth Lee, D.J. Nutter, B. Antani, S. Mitra, S. Archibald, J. protein data representation data mining ontologies protein structure protein data protein families protein ontology project ontology protein ontologies protein ontology proteomics Advances in proteomics and protein expression techniques have lead to the elucidation of large amounts of protein data. Various data mining algorithms and mathematical models provide methods for analyzing this data; however, there are two issues that need to be addressed: (1) the need for standards for defining protein data description and exchange formats so they can be exchanged across the World Wide Web, and also read into data mining software in a consistent format and (2) eliminating errors which arise with the data integration methodologies for complex queries. Protein Ontology is designed to meet these needs by providing a structured protein data specification for Protein Data Representation. Protein Ontology is a standard for representing protein data in a way that helps in defining data integration and data mining models for Protein Structure and Function. In this paper we summarize the structure of Protein Ontology we developed earlier, its current applications to various protein families, and its future development. 2006 Conference Paper http://hdl.handle.net/20.500.11937/12084 10.1109/CBMS.2006.35 IEEE Computer Society Press fulltext |
| spellingShingle | protein data representation data mining ontologies protein structure protein data protein families protein ontology project ontology protein ontologies protein ontology proteomics Sidhu, Amandeep Dillon, Tharam S. Chang, Elizabeth Advances in protein ontology project |
| title | Advances in protein ontology project |
| title_full | Advances in protein ontology project |
| title_fullStr | Advances in protein ontology project |
| title_full_unstemmed | Advances in protein ontology project |
| title_short | Advances in protein ontology project |
| title_sort | advances in protein ontology project |
| topic | protein data representation data mining ontologies protein structure protein data protein families protein ontology project ontology protein ontologies protein ontology proteomics |
| url | http://hdl.handle.net/20.500.11937/12084 |