Overview of genomic and bioinformatic resources for Zymoseptoria.
Zymoseptoria tritici (syn. Mycosphaerella graminicola, Septoria tritici) is a haploid fungus belonging to the class Dothideomycetes. It is the causal agent of septoria leaf blotch – one of the world’s most significant diseases of wheat. Here we review the genomic and bioinformatic resources that hav...
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| Format: | Journal Article |
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Academic Press
2015
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| Online Access: | http://hdl.handle.net/20.500.11937/11747 |
| _version_ | 1848747888619814912 |
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| author | Renwick, Alison Oliver, Richard Hane, James |
| author_facet | Renwick, Alison Oliver, Richard Hane, James |
| author_sort | Renwick, Alison |
| building | Curtin Institutional Repository |
| collection | Online Access |
| description | Zymoseptoria tritici (syn. Mycosphaerella graminicola, Septoria tritici) is a haploid fungus belonging to the class Dothideomycetes. It is the causal agent of septoria leaf blotch – one of the world’s most significant diseases of wheat. Here we review the genomic and bioinformatic resources that have been generated for Z. tritici. These include the whole-genome reference assembly for isolate IPO323, genome resequencing of alternate isolates, mitochondrial genome sequences, transcriptome sequences and expression data, and annotations of gene structure and function. We also highlight important advances in our fundamental knowledge of genome evolution and its effects on adaptation and pathogenicity in Z. tritici that have been facilitated by these resources. |
| first_indexed | 2025-11-14T06:56:18Z |
| format | Journal Article |
| id | curtin-20.500.11937-11747 |
| institution | Curtin University Malaysia |
| institution_category | Local University |
| last_indexed | 2025-11-14T06:56:18Z |
| publishDate | 2015 |
| publisher | Academic Press |
| recordtype | eprints |
| repository_type | Digital Repository |
| spelling | curtin-20.500.11937-117472017-09-13T14:59:19Z Overview of genomic and bioinformatic resources for Zymoseptoria. Renwick, Alison Oliver, Richard Hane, James Pathogenomics Zymoseptoria tritici Bioinformatics Transcriptome Genome Zymoseptoria tritici (syn. Mycosphaerella graminicola, Septoria tritici) is a haploid fungus belonging to the class Dothideomycetes. It is the causal agent of septoria leaf blotch – one of the world’s most significant diseases of wheat. Here we review the genomic and bioinformatic resources that have been generated for Z. tritici. These include the whole-genome reference assembly for isolate IPO323, genome resequencing of alternate isolates, mitochondrial genome sequences, transcriptome sequences and expression data, and annotations of gene structure and function. We also highlight important advances in our fundamental knowledge of genome evolution and its effects on adaptation and pathogenicity in Z. tritici that have been facilitated by these resources. 2015 Journal Article http://hdl.handle.net/20.500.11937/11747 10.1016/j.fgb.2015.04.011 Academic Press unknown |
| spellingShingle | Pathogenomics Zymoseptoria tritici Bioinformatics Transcriptome Genome Renwick, Alison Oliver, Richard Hane, James Overview of genomic and bioinformatic resources for Zymoseptoria. |
| title | Overview of genomic and bioinformatic resources for Zymoseptoria. |
| title_full | Overview of genomic and bioinformatic resources for Zymoseptoria. |
| title_fullStr | Overview of genomic and bioinformatic resources for Zymoseptoria. |
| title_full_unstemmed | Overview of genomic and bioinformatic resources for Zymoseptoria. |
| title_short | Overview of genomic and bioinformatic resources for Zymoseptoria. |
| title_sort | overview of genomic and bioinformatic resources for zymoseptoria. |
| topic | Pathogenomics Zymoseptoria tritici Bioinformatics Transcriptome Genome |
| url | http://hdl.handle.net/20.500.11937/11747 |